MELO3C030977.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C030977.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	lamin-like protein
Location	chr04: 27735893 .. 27736423 (+)
Sequence length	408
RNA-Seq Expression	MELO3C030977.1
Synteny	MELO3C030977.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGATTAAATATCTATGTGTCAGTTAATGAAAATTGTGTACTATAATTTTATAACTACATTAACCACACATGTTTATTAGATTTCGTGTTCGACAAACGGTACTACAACGTATTGGAAGTGAACAAAAGGAGTTATGAGGATTGCAACGACAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGATGTGTTTCAGCTATCAGAGTTGCACCCATATTTTTTCATCGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACGTATCCGCAGTTGATTCCGCGCCAGCTCCGTCGCCTGCAGCCTCTAACAAAAGCGGCGGTGGTGCCAGCTTCCTATCAAATAATCCCACCTTTTGTTGTTCAGTTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTTCTTCTGCGTGGTTAATTAAGATTGAATGGTGAATAATGAGGCTAGATTCTCTTTTTGAACCTTTGTTTGATTTAGAGGCTTTGGTTTTGAACTTAGGAAGTGAAACTCTTACTTGA

mRNA sequence

ATGTGGATTAAATATCTATGTGTCAATTTCGTGTTCGACAAACGGTACTACAACGTATTGGAAGTGAACAAAAGGAGTTATGAGGATTGCAACGACAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGATGTGTTTCAGCTATCAGAGTTGCACCCATATTTTTTCATCGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACGTATCCGCAGTTGATTCCGCGCCAGCTCCGTCGCCTGCAGCCTCTAACAAAAGCGGCGGTGGTGCCAGCTTCCTATCAAATAATCCCACCTTTTGTTGTTCAGTTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTTCTTCTGCGTGAGGCTTTGGTTTTGAACTTAGGAAGTGAAACTCTTACTTGA

Coding sequence (CDS)

ATGTGGATTAAATATCTATGTGTCAATTTCGTGTTCGACAAACGGTACTACAACGTATTGGAAGTGAACAAAAGGAGTTATGAGGATTGCAACGACAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGATGTGTTTCAGCTATCAGAGTTGCACCCATATTTTTTCATCGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACGTATCCGCAGTTGATTCCGCGCCAGCTCCGTCGCCTGCAGCCTCTAACAAAAGCGGCGGTGGTGCCAGCTTCCTATCAAATAATCCCACCTTTTGTTGTTCAGTTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTTCTTCTGCGTGAGGCTTTGGTTTTGAACTTAGGAAGTGAAACTCTTACTTGA

Protein sequence

MWIKYLCVNFVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMKLAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLREALVLNLGSETLT

Homology

[Close]

BLAST of MELO3C030977.1 vs. NCBI nr
Match: XP_008443357.1 (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 228.8 bits (582), Expect = 2.8e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK
Sbjct: 71  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 130

Query: 70  LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR 123
           LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR
Sbjct: 131 LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR 183

[Close]

BLAST of MELO3C030977.1 vs. NCBI nr
Match: KAA0053800.1 (lamin-like protein [Cucumis melo var. makuwa] >TYK25601.1 lamin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 2.8e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK
Sbjct: 54  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 113

Query: 70  LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR 123
           LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR
Sbjct: 114 LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR 166

[Close]

BLAST of MELO3C030977.1 vs. NCBI nr
Match: KGN59686.2 (hypothetical protein Csa_001715 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-47
Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNKRS+EDCN+KDFIKNITRGGRDVFQL+ELHPYFFIGGGGYCFQGMK
Sbjct: 95  FVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMK 154

Query: 70  LAVYVSAVD-SAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 122
           LAVY+S VD SAPAPSPA SNKSGG  +FLSNNPT CCS+LNALLLFVAIF L
Sbjct: 155 LAVYMSTVDHSAPAPSPAGSNKSGG--AFLSNNPTLCCSILNALLLFVAIFFL 205

[Close]

BLAST of MELO3C030977.1 vs. NCBI nr
Match: XP_004136681.1 (lamin-like protein [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-47
Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNKRS+EDCN+KDFIKNITRGGRDVFQL+ELHPYFFIGGGGYCFQGMK
Sbjct: 72  FVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMK 131

Query: 70  LAVYVSAVD-SAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 122
           LAVY+S VD SAPAPSPA SNKSGG  +FLSNNPT CCS+LNALLLFVAIF L
Sbjct: 132 LAVYMSTVDHSAPAPSPAGSNKSGG--AFLSNNPTLCCSILNALLLFVAIFFL 182

[Close]

BLAST of MELO3C030977.1 vs. NCBI nr
Match: XP_022926318.1 (lamin-like protein [Cucurbita moschata] >KAG6588504.1 Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022335.1 Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.9 bits (372), Expect = 6.3e-32
Identity = 78/112 (69.64%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNK SYE CN+K+FIKNITRGGRDVFQL+EL PYFFI GGGYCFQGMK
Sbjct: 58  FVFDKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMK 117

Query: 70  LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 122
           LAV V     APA  P+A+  SG   S    NPT  C ++NAL+LFVA+FL+
Sbjct: 118 LAVLVCPTAVAPAAPPSATPISGASLS----NPT--CWIMNALMLFVALFLV 163

[Close]

BLAST of MELO3C030977.1 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.4e-10
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRG-GRDVFQLSELHPYFFIGGGGYCFQGM 69
           FVFD+  +N+LEVNK  YE C     I+N TRG GRD+  L++   Y+ + G G C+ GM
Sbjct: 60  FVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGM 119

Query: 70  KLAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIF 120
           KL+V    V+  P P  +A  K+ G  S ++    F   V  +L  F A++
Sbjct: 120 KLSV---KVEKLPPPPKSAPVKNIGSVSMVTGLAQFMIPV--SLFAFPAMW 165

[Close]

BLAST of MELO3C030977.1 vs. ExPASy TrEMBL
Match: A0A5A7UEY9 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007600 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK
Sbjct: 54  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 113

Query: 70  LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR 123
           LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR
Sbjct: 114 LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR 166

[Close]

BLAST of MELO3C030977.1 vs. ExPASy TrEMBL
Match: A0A1S3B8J9 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486965 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.4e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK
Sbjct: 71  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 130

Query: 70  LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR 123
           LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR
Sbjct: 131 LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLR 183

[Close]

BLAST of MELO3C030977.1 vs. ExPASy TrEMBL
Match: A0A0A0LF66 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824210 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 8.8e-48
Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNKRS+EDCN+KDFIKNITRGGRDVFQL+ELHPYFFIGGGGYCFQGMK
Sbjct: 107 FVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMK 166

Query: 70  LAVYVSAVD-SAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 122
           LAVY+S VD SAPAPSPA SNKSGG  +FLSNNPT CCS+LNALLLFVAIF L
Sbjct: 167 LAVYMSTVDHSAPAPSPAGSNKSGG--AFLSNNPTLCCSILNALLLFVAIFFL 217

[Close]

BLAST of MELO3C030977.1 vs. ExPASy TrEMBL
Match: A0A6J1EHP8 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433505 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.0e-32
Identity = 78/112 (69.64%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVNK SYE CN+K+FIKNITRGGRDVFQL+EL PYFFI GGGYCFQGMK
Sbjct: 58  FVFDKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMK 117

Query: 70  LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 122
           LAV V     APA  P+A+  SG   S    NPT  C ++NAL+LFVA+FL+
Sbjct: 118 LAVLVCPTAVAPAAPPSATPISGASLS----NPT--CWIMNALMLFVALFLV 163

[Close]

BLAST of MELO3C030977.1 vs. ExPASy TrEMBL
Match: A0A6J1I2W1 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469092 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.9e-30
Identity = 76/112 (67.86%), Postives = 86/112 (76.79%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           FVFDKRYYNVLEVN+ SYE C +K+FIKNITRGGRDVFQL+EL PYFFI GGGYCFQGMK
Sbjct: 58  FVFDKRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMK 117

Query: 70  LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 122
           LAV V     APA  P+A+  S    S    NPT  C ++NALLLFVA+FL+
Sbjct: 118 LAVLVCPTAVAPAAPPSATPISRASLS----NPT--CWIMNALLLFVALFLV 163

[Close]

BLAST of MELO3C030977.1 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-18
Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 69
           F F++  +N+L+VNK SYE C D D+I NITRGGRDVFQL E  PY+FI G GYC +GMK
Sbjct: 60  FGFNRTRHNILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMK 119

Query: 70  LAVYVSAVDSAPAPSPAA 88
           LA+ V      P P P+A
Sbjct: 120 LAITV-----LPQPPPSA 132

[Close]

BLAST of MELO3C030977.1 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11
Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 8  VNFVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRG-GRDVFQLSELHPYFFIGGGGYCFQ 67
          +NFVF +  +N+LEVNK  YE C     I+N TRG GRD+  L E   Y+ + G G C Q
Sbjct: 20 LNFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQ 79

Query: 68 GMKLAVYVSAVDSAPAPSP 86
          GMKL V    V++ P P P
Sbjct: 80 GMKLDV---LVETPPPPPP 95

[Close]

BLAST of MELO3C030977.1 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 65.5 bits (158), Expect = 3.8e-11
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRG-GRDVFQLSELHPYFFIGGGGYCFQGM 69
           FVFD+  +N+LEVNK  YE C     I+N TRG GRD+  L++   Y+ + G G C+ GM
Sbjct: 60  FVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGM 119

Query: 70  KLAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIF 120
           KL+V    V+  P P  +A  K+ G  S ++    F   V  +L  F A++
Sbjct: 120 KLSV---KVEKLPPPPKSAPVKNIGSVSMVTGLAQFMIPV--SLFAFPAMW 165

[Close]

BLAST of MELO3C030977.1 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRG-GRDVFQLSELHPYFFI-GGGGYCFQG 69
           FV+++  YNV+EVN+ +Y  CN  + I N +RG GRD+  L+    Y+ I G GG C+ G
Sbjct: 58  FVYERNQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGG 117

Query: 70  MKLAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAI 119
           MKLAV    V+  P P  AA NK+    +F  +   F    L  + +F A+
Sbjct: 118 MKLAV---LVEKPPPPPAAAPNKNSARRTFSVSG--FAYQFLIPVAVFAAV 163

[Close]

BLAST of MELO3C030977.1 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 10  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRG-GRDVFQLSELHPYFFIGGGGYCFQGM 69
           FVF +  +N+LEVNK  YE C     I+N TRG GRD+  L E   Y+ + G G C QGM
Sbjct: 60  FVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGM 119

Query: 70  KLAVYVSAVDSAPAPSP 86
           KL V    V++ P P P
Sbjct: 120 KLDV---LVETPPPPPP 133

The following BLAST results are available for this feature:

BLAST of MELO3C030977.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443357.1	2.8e-56	100.00	PREDICTED: lamin-like protein [Cucumis melo]	[more]
KAA0053800.1	2.8e-56	100.00	lamin-like protein [Cucumis melo var. makuwa] >TYK25601.1 lamin-like protein [Cu...	[more]
KGN59686.2	1.8e-47	88.50	hypothetical protein Csa_001715 [Cucumis sativus]	[more]
XP_004136681.1	1.8e-47	88.50	lamin-like protein [Cucumis sativus]	[more]
XP_022926318.1	6.3e-32	69.64	lamin-like protein [Cucurbita moschata] >KAG6588504.1 Lamin-like protein, partia...	[more]

BLAST of MELO3C030977.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	5.4e-10	38.74	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]

BLAST of MELO3C030977.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UEY9	1.4e-56	100.00	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B8J9	1.4e-56	100.00	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486965 PE=4 SV=1	[more]
A0A0A0LF66	8.8e-48	88.50	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824210...	[more]
A0A6J1EHP8	3.0e-32	69.64	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433505 PE=4 SV=1	[more]
A0A6J1I2W1	2.9e-30	67.86	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469092 PE=4 SV=1	[more]

BLAST of MELO3C030977.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27035.1	1.9e-18	57.69	early nodulin-like protein 20	[more]
AT4G12880.2	2.2e-11	46.84	early nodulin-like protein 19	[more]
AT5G15350.1	3.8e-11	38.74	early nodulin-like protein 17	[more]
AT3G01070.1	1.1e-10	38.74	early nodulin-like protein 16	[more]
AT4G12880.1	1.5e-10	46.75	early nodulin-like protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 8..68 e-value: 5.9E-8 score: 32.6
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 1..76 score: 17.282766
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 6..75 e-value: 4.6E-14 score: 54.1
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 8..74
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 9..84
None	No IPR available	PANTHER	PTHR33021:SF262	EARLY NODULIN-LIKE PROTEIN 20	coord: 9..84

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C030977	MELO3C030977	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030977.1:exon:122802	MELO3C030977.1:exon:122802	exon
MELO3C030977.1:exon:122803	MELO3C030977.1:exon:122803	exon
MELO3C030977.1:exon:122804	MELO3C030977.1:exon:122804	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C030977.1:cds	MELO3C030977.1:cds	CDS
MELO3C030977.1:cds	MELO3C030977.1:cds_2	CDS
MELO3C030977.1:cds	MELO3C030977.1:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C030977.1	MELO3C030977.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0009055	electron transfer activity