MELO3C029195.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C029195.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionhyoscyamine 6-dioxygenase-like
Locationchr01: 28130703 .. 28131343 (-)
Sequence length569
RNA-Seq ExpressionMELO3C029195.1
SyntenyMELO3C029195.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTATGCATAAATTTAATTATTTGTTTTGTTGGCTCACTTTTACCACACCAAATGTTTTCAAACCTCAACCAAAATTTTGAAAAATAAACACAAATAAATGGTAGGTTCCAAAAACTTGTATTTTCTTTTAAAGTTAGATTAAAAAAGTTCAAGAGTTTTTCAAAAAAACAAATGACAAACTAAAAACAAAATGGTTACCAACATGATTACGAAGCCTATTAGTAGAAATTCTTATACTGCAACAACTTGCCTATCTATTTAAACCATAAAAGAAAAAGAGAAACCTCAGTATTGTATATAAATTAGAAGCTACTTCATTCTCATATTATCGATCAATATCATTGGATAGATAATCGCATGATGTCTCAAACAAAGTTTGTGTCTAATTGGAAGGGTGTTGAATCAGTTCCAGAAACATATGTGTATCCTCCAGAGAAGAGGTTTGGCGTCTCGGTGAAGAAGACGATTCCAGTGATCGATTGGGCAATAGACGATCGAACTCTTCTCCTCAAAAAAGTTCACGATGTTACTCAAGAGTTTGGATTTGTCCAGGTTCGAATGTTGTTCTGTAGATTCTTGATGATACTACCATAAGACTCATAAATTTATTTTGATCACTTATAGAGCACAAAAATTTAA

mRNA sequence

ATCTATGCATAAATTTAATTATTTGTTTTGTTGGCTCACTTTTACCACACCAAATGTTTTCAAACCTCAACCAAAATTTTGAAAAATAAACACAAATAAATGGTAGGTTCCAAAAACTTGTATTTTCTTTTAAAGTTAGATTAAAAAAGTTCAAGAGTTTTTCAAAAAAACAAATGACAAACTAAAAACAAAATGGTTACCAACATGATTACGAAGCCTATTAGTAGAAATTCTTATACTGCAACAACTTGCCTATCTATTTAAACCATAAAAGAAAAAGAGAAACCTCAGTATTGTATATAAATTAGAAGCTACTTCATTCTCATATTATCGATCAATATCATTGGATAGATAATCGCATGATGTCTCAAACAAAGTTTGTGTCTAATTGGAAGGGTGTTGAATCAGTTCCAGAAACATATGTGTATCCTCCAGAGAAGAGGTTTGGCGTCTCGGTGAAGAAGACGATTCCAGTGATCGATTGGGCAATAGACGATCGAACTCTTCTCCTCAAAAAAGTTCACGATGTTACTCAAGAGTTTGGATTTGTCCAGAGCACAAAAATTTAA

Coding sequence (CDS)

ATGATGTCTCAAACAAAGTTTGTGTCTAATTGGAAGGGTGTTGAATCAGTTCCAGAAACATATGTGTATCCTCCAGAGAAGAGGTTTGGCGTCTCGGTGAAGAAGACGATTCCAGTGATCGATTGGGCAATAGACGATCGAACTCTTCTCCTCAAAAAAGTTCACGATGTTACTCAAGAGTTTGGATTTGTCCAGAGCACAAAAATTTAA

Protein sequence

MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQEFGFVQSTKI
Homology
BLAST of MELO3C029195.1 vs. NCBI nr
Match: XP_008451257.1 (PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 5.7e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0

Query: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60
          MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE
Sbjct: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60

Query: 61 FGFVQ 66
          FGFVQ
Sbjct: 61 FGFVQ 65

BLAST of MELO3C029195.1 vs. NCBI nr
Match: KAA0059649.1 (hyoscyamine 6-dioxygenase-like [Cucumis melo var. makuwa] >TYK08181.1 hyoscyamine 6-dioxygenase-like [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 8.2e-28
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0

Query: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60
          MMSQTKFVSNWKGVESVPETYVYPPEKRFG+SVKKTIPVIDWAIDDR LLLKKVHDVT+E
Sbjct: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGISVKKTIPVIDWAIDDRALLLKKVHDVTRE 60

Query: 61 FGFVQ 66
          FGFVQ
Sbjct: 61 FGFVQ 65

BLAST of MELO3C029195.1 vs. NCBI nr
Match: XP_004148957.1 (hyoscyamine 6-dioxygenase [Cucumis sativus] >KGN44743.1 hypothetical protein Csa_016242 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-23
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0

Query: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60
          MMS+TKFVSNW GV SVPETYVYPPEKRFG+SVKK+IPVIDW+ DDR LLLK+VHDVTQE
Sbjct: 1  MMSRTKFVSNWGGVVSVPETYVYPPEKRFGISVKKSIPVIDWS-DDRALLLKRVHDVTQE 60

Query: 61 FGFVQ 66
          FGFVQ
Sbjct: 61 FGFVQ 64

BLAST of MELO3C029195.1 vs. NCBI nr
Match: XP_011659768.2 (protein DOWNY MILDEW RESISTANCE 6 [Cucumis sativus] >KAE8646291.1 hypothetical protein Csa_015678 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 3.1e-19
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = 0

Query: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60
          MMSQTKFVSNWKG+ SVPETYV PPEKR GVSVKK IPVID A +DR LL KKV DV+QE
Sbjct: 1  MMSQTKFVSNWKGIGSVPETYVCPPEKRVGVSVKKKIPVIDLATEDRDLLSKKVLDVSQE 60

Query: 61 FGFVQ 66
          FGF Q
Sbjct: 61 FGFFQ 65

BLAST of MELO3C029195.1 vs. NCBI nr
Match: XP_011659260.2 (hyoscyamine 6-dioxygenase [Cucumis sativus] >KAE8646292.1 hypothetical protein Csa_015685 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 3.0e-14
Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0

Query: 1   MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60
           +M+Q  FVSNW+GVESVPE+YV+P EKR G+++KKTIPV+D+A  DR LL +K+ D T E
Sbjct: 39  IMAQMNFVSNWEGVESVPESYVWPQEKRPGIALKKTIPVLDFATQDRALLFQKILDSTHE 98

Query: 61  FGFVQ 66
           FG  Q
Sbjct: 99  FGVFQ 103

BLAST of MELO3C029195.1 vs. ExPASy TrEMBL
Match: A0A1S3BRU2 (hyoscyamine 6-dioxygenase-like OS=Cucumis melo OX=3656 GN=LOC103492607 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.7e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0

Query: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60
          MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE
Sbjct: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60

Query: 61 FGFVQ 66
          FGFVQ
Sbjct: 61 FGFVQ 65

BLAST of MELO3C029195.1 vs. ExPASy TrEMBL
Match: A0A5A7V1J0 (Hyoscyamine 6-dioxygenase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00760 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-28
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0

Query: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60
          MMSQTKFVSNWKGVESVPETYVYPPEKRFG+SVKKTIPVIDWAIDDR LLLKKVHDVT+E
Sbjct: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGISVKKTIPVIDWAIDDRALLLKKVHDVTRE 60

Query: 61 FGFVQ 66
          FGFVQ
Sbjct: 61 FGFVQ 65

BLAST of MELO3C029195.1 vs. ExPASy TrEMBL
Match: A0A0A0K5H0 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375850 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0

Query: 1  MMSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQE 60
          MMS+TKFVSNW GV SVPETYVYPPEKRFG+SVKK+IPVIDW+ DDR LLLK+VHDVTQE
Sbjct: 1  MMSRTKFVSNWGGVVSVPETYVYPPEKRFGISVKKSIPVIDWS-DDRALLLKRVHDVTQE 60

Query: 61 FGFVQ 66
          FGFVQ
Sbjct: 61 FGFVQ 64

BLAST of MELO3C029195.1 vs. ExPASy TrEMBL
Match: A0A0A0K745 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375860 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.7e-19
Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0

Query: 2  MSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQEF 61
          MSQTKFVSNWKG+ SVPETYV PPEKR GVSVKK IPVID A +DR LL KKV DV+QEF
Sbjct: 1  MSQTKFVSNWKGIGSVPETYVCPPEKRVGVSVKKKIPVIDLATEDRDLLSKKVLDVSQEF 60

Query: 62 GFVQ 66
          GF Q
Sbjct: 61 GFFQ 64

BLAST of MELO3C029195.1 vs. ExPASy TrEMBL
Match: A0A0A0K4U9 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G376360 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 0

Query: 2  MSQTKFVSNWKGVESVPETYVYPPEKRFGVSVKKTIPVIDWAIDDRTLLLKKVHDVTQEF 61
          M+Q  FVSNW+GVESVPE+YV+P EKR G+++KKTIPV+D+A  DR LL +K+ D T EF
Sbjct: 1  MAQMNFVSNWEGVESVPESYVWPQEKRPGIALKKTIPVLDFATQDRALLFQKILDSTHEF 60

Query: 62 GFVQ 66
          G  Q
Sbjct: 61 GVFQ 64

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008451257.15.7e-29100.00PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis melo][more]
KAA0059649.18.2e-2895.38hyoscyamine 6-dioxygenase-like [Cucumis melo var. makuwa] >TYK08181.1 hyoscyamin... [more]
XP_004148957.12.7e-2386.15hyoscyamine 6-dioxygenase [Cucumis sativus] >KGN44743.1 hypothetical protein Csa... [more]
XP_011659768.23.1e-1980.00protein DOWNY MILDEW RESISTANCE 6 [Cucumis sativus] >KAE8646291.1 hypothetical p... [more]
XP_011659260.23.0e-1461.54hyoscyamine 6-dioxygenase [Cucumis sativus] >KAE8646292.1 hypothetical protein C... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BRU22.7e-29100.00hyoscyamine 6-dioxygenase-like OS=Cucumis melo OX=3656 GN=LOC103492607 PE=3 SV=1[more]
A0A5A7V1J04.0e-2895.38Hyoscyamine 6-dioxygenase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0K5H01.3e-2386.15Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G... [more]
A0A0A0K7455.7e-1979.69Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G... [more]
A0A0A0K4U91.9e-1462.50Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027443Isopenicillin N synthase-like superfamilyGENE3D2.60.120.330coord: 3..68
e-value: 1.1E-5
score: 27.2

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C029195MELO3C029195gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029195.1:exon:30709MELO3C029195.1:exon:30709exon
MELO3C029195.1:exon:30708MELO3C029195.1:exon:30708exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029195.1:cdsMELO3C029195.1:cdsCDS
MELO3C029195.1:cdsMELO3C029195.1:cds_2CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029195.1:five_prime_utrMELO3C029195.1:five_prime_utrfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C029195.1MELO3C029195.1-proteinpolypeptide