Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAATGCAACATTATAGGTAATAATTGAGTCGCAAGATGAATATATTAAAGGTTTAGAAAGGGGGAAGGAATATTTCCTCGAGCTTGTCAATGATTTGAATACATCAATTGGAAAATAGTTAACACATATAATAGATTTGGAAGCACATGGTCATTCTCCACGTCAAACTGTTGATAACCTACATGTGAAGATGATTGAGCACTTTGAAGAATATGAGATATTGAATAATTATGTTGATTCCTTACACTATCAACTTTTTAAATTTCAAAATTCAAGTGAGAAGATAGTGTAAGAATATAAGTTACTGAAGACAGATTAAATGCAAATGAAG mRNA sequence ATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAATGCAACATTATAGGTAATAATTGAGTCGCAAGATGAATATATTAAAGGTTTAGAAAGGGGGAAGGAATATTTCCTCGAGCTTGTCAATGATTTGAATACATCAATTGGAAAATAGTTAACACATATAATAGATTTGGAAGCACATGGTCATTCTCCACGTCAAACTGTTGATAACCTACATGTGAAGATGATTGAGCACTTTGAAGAATATGAGATATTGAATAATTATGTTGATTCCTTACACTATCAACTTTTTAAATTTCAAAATTCAAGTGAGAAGATAGTGTAAGAATATAAGTTACTGAAGACAGATTAAATGCAAATGAAG Coding sequence (CDS) ATGATTGAGCACTTTGAAGAATATGAGATATTGAATAATTATGTTGATTCCTTACACTATCAACTTTTTAAATTTCAAAATTCAAGTGAGAAGATAGTGTAA Protein sequence MIEHFEEYEILNNYVDSLHYQLFKFQNSSEKIV
Homology
BLAST of MELO3C027526.1 vs. NCBI nr
Match: KAA0034022.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 54.3 bits (129), Expect = 2.3e-04 Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 1 MIEHFEEYEILNNYVDSLHYQLFKFQNSSEKIV 34 M E FEEYEIL NYVDSLHYQL FQNSSE+I+ Sbjct: 21 MAERFEEYEILKNYVDSLHYQLTTFQNSSERIM 53
BLAST of MELO3C027526.1 vs. ExPASy TrEMBL
Match: A0A5A7SS95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00050 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-04 Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 1 MIEHFEEYEILNNYVDSLHYQLFKFQNSSEKIV 34 M E FEEYEIL NYVDSLHYQL FQNSSE+I+ Sbjct: 21 MAERFEEYEILKNYVDSLHYQLTTFQNSSERIM 53
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0034022.1 | 2.3e-04 | 78.79 | girdin-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SS95 | 1.1e-04 | 78.79 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00050 PE=... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C027526.1:exon:180307 | MELO3C027526.1:exon:180307 | exon |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C027526.1:five_prime_utr | MELO3C027526.1:five_prime_utr | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C027526.1:cds | MELO3C027526.1:cds | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C027526.1:three_prime_utr | MELO3C027526.1:three_prime_utr | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
MELO3C027526.1 | MELO3C027526.1-protein | polypeptide |
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