MELO3C027257.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C027257.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr06: 7663904 .. 7664129 (+)
Sequence length	226
RNA-Seq Expression	MELO3C027257.1
Synteny	MELO3C027257.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCACGCAGCCAAGAAACCCTATCTTCCGGGTTGCCAGATACCCATCTCGCCGATCCACCACCATCTTCTTCTCCTAGCCCTAACGGCGCTTGATCTACATGCCTCTGTACTAATTGAACCAGACGGGAAGCGGGAAGACATATACCATCTGGGGTCCACCCAATGCTTTGTCCGATGGTTACTGTTTTGTTCTCGAGGTTGGACAACGGTTGCCTTCCACG

mRNA sequence

ATGAAGCACGCAGCCAAGAAACCCTATCTTCCGGGTTGCCAGATACCCATCTCGCCGATCCACCACCATCTTCTTCTCCTAGCCCTAACGGCGCTTGATCTACATGCCTCTGTACTAATTGAACCAGACGGGAAGCGGGAAGACATATACCATCTGGGGTCCACCCAATGCTTTGTCCGATGGTTACTGTTTTGTTCTCGAGGTTGGACAACGGTTGCCTTCCACG

Coding sequence (CDS)

ATGAAGCACGCAGCCAAGAAACCCTATCTTCCGGGTTGCCAGATACCCATCTCGCCGATCCACCACCATCTTCTTCTCCTAGCCCTAACGGCGCTTGATCTACATGCCTCTGTACTAATTGAACCAGACGGGAAGCGGGAAGACATATACCATCTGGGGTCCACCCAATGCTTTGTCCGATGGTTACTGTTTTGTTCTCGAGGTTGGACAACGGTTGCCTTCCAC

Protein sequence

MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKREDIYHLGSTQCFVRWLLFCSRGWTTVAFH

Homology

[Close]

BLAST of MELO3C027257.1 vs. NCBI nr
Match: XP_016903653.1 (PREDICTED: uncharacterized protein LOC103504184 [Cucumis melo] >KAA0050448.1 uncharacterized protein E6C27_scaffold175G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 103.6 bits (257), Expect = 7.6e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1  MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED 49
          MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED
Sbjct: 1  MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED 48

[Close]

BLAST of MELO3C027257.1 vs. ExPASy TrEMBL
Match: A0A5A7U5A2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00550 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.7e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1  MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED 49
          MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED
Sbjct: 1  MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED 48

[Close]

BLAST of MELO3C027257.1 vs. ExPASy TrEMBL
Match: A0A1S4E5Z6 (uncharacterized protein LOC103504184 OS=Cucumis melo OX=3656 GN=LOC103504184 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.7e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 1  MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED 49
          MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED
Sbjct: 1  MKHAAKKPYLPGCQIPISPIHHHLLLLALTALDLHASVLIEPDGKRED 48

The following BLAST results are available for this feature:

BLAST of MELO3C027257.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903653.1	7.6e-19	100.00	PREDICTED: uncharacterized protein LOC103504184 [Cucumis melo] >KAA0050448.1 unc...	[more]

BLAST of MELO3C027257.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027257.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5A2	3.7e-19	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S4E5Z6	3.7e-19	100.00	uncharacterized protein LOC103504184 OS=Cucumis melo OX=3656 GN=LOC103504184 PE=...	[more]

BLAST of MELO3C027257.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C027257	MELO3C027257	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C027257.1:exon:166052	MELO3C027257.1:exon:166052	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C027257.1:cds	MELO3C027257.1:cds	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C027257.1:three_prime_utr	MELO3C027257.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C027257.1	MELO3C027257.1-protein	polypeptide