MELO3C025499.1 (mRNA) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTTACATGCAACGATATAATATTGTCAGTCACATTGTGACGACTCTAGGGATAATCCCTATCGTTATATATGGCAAATTTTACTTGCCAAATCTTGAGAGTAGCAGCAACTTTTCAAGAAGCCTTAGTTTGGAAATATGTTAATGGAGTTTGGCTTTGTTTTCTACAACAAAAGCAAGCACTGGAAATCTTGTAAAGGCATCGTTTCATTCAAATCCTAAACTCCCTTAATGGTGTCTCTTGGACCCTATTAAATACCAAAGCCCTTCCCCTAATCCCTTCTTCTTCTTCAAGAACAAAGTTAGTTTTCTTTTCTTCTTTTCTTTTTCTTTAATATTAAGTAGATGGCTTCTTCTTCCTCGTCTCTGCAAGACACTATTAATTACACTATAACACAAGAAGAGTTCAACATGTTTCACACGATCGACCGAAAGCTTTTTAGTCGAATGGTTTTTTCCCTGGGTCGGGAGCCGGACGAGTCGGTTCGAGTGATGGGATTTTGGCTTTGGCTGGAAAAAAATGGTGAAGAGTCGAGTTTGGTTTACAAAATATTGGGTTTGCCAGACGTTTTGGTTGATGCACTTTGTGATGAAGCCGTCATGTCCTTGGCTTGTATAGAAAACGACAAATTCCCATTTGAACCGGATTCGACCGTAGATGTTCCTCTCATTCAACACGTTTCTAAAACTCCGGTTTCTCTCCGGTTCTTCCACCTAAACCGGCTCGGAATCCTCCGTGGCGTTACCAAGATGTGTAACGATATCTGCAATAGAGCCTTTCTTGATATTCTCCAAGCGCTTCATACACGGCGCGCGATATCACGCGCCCCCGCTGCCGTATCCATTCCGGCAGTTCAAGGCGAAGGCGGCCGTGGAAGGGTCTTTGAGGGCCGGGCTCCTCCGGTGAGTAAATTTTTTGTACCAAGTATTGGGTTTTTAGGGTTGAGGGGAGAGGGTTCGACGGCGGCGATTCGGAGTGGAATGAGTAGTTTGGAGTTGAAAAGTGGGAAGGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGGGGAAGCGATTCCGGCGGATCAAAGGACCATTTTTCTGACTTTCTCGAAAGGATACCCAATTTCTGAAGATGAAGTTAGAGACTTTTTTGGCAGGTTTTTTTTTTCTTTCTTTTAAATTTAATAATTGATTAATTAATTAATTAATTAATTAATTCTTGGTTATTTTAATTAATTAATTCTTGGTTATTTTCCCAATATGTCTCTCTATATTCCTCTGCATGTCGAAAATTTTGTCAAAGATTTTTTAGATTGTAGCGAAGAGTCAGAGATTTTCTTTATGACACATATTCTTAAATTTAAAGAGTTTTTAATAGAATCTAAGATTTATAATTTTGTATCTAACACAAATTTTCAAGTTATTTAATTCTAAAATTTCAAGTTTGTGTATTACTATTTAGTAAATCTATGTTTTTTTTTTTTCCAATTTTTGAAAAAAGGAATATCAAGTTTGGTAATTGAGAATTTAAAAGGGAAGAAATTGAGGCAAATCGCCAAATCCTACCTGTTTTCTGTATCATTCGAAATTGAAGGGAAGTTAATCTACGAGTGGAGCAAATAAAGGAACACAAAATACCTTCTTTCTATAAAACTTTTTATAGAAAAATAGCATAAAAAGCAACTTGGCTTTTTGTTTTTACCAAGTTTGACTGATGCCTTTTTTGTGCATGAATATAGACGGTTGTTAGACTTGCCTTTCATGGAAATACTTCTGCTCCTCAATATCCCTCATTTTTAAAAAGTTCTAATATTTAGATGCTTTTTTAATAAATCAAGACACCTAAAATGACTTTTTTCTTTCTTTCTTCTTTCCCTTTTTCTTTTGGGAAGGACCTGAAAATGTAATTTAAGCTTCTAATATTACGTATATTTGTGGTATTTGAGCAGAAGATATGGGGATTTCATAGAGAGCATTCACATGCAAGAGGCACACCCACCGGAGCAACCGCTGTACGCCCGGCTCGTGGTGAAAACAGAGTCCTACATCGACCTCGTCCTCGAAGCAAGAACCAAGGCTAAATTTTCCATCAACGGTAAACACGTGTGGGCTCGAAAATATGTTCGTAAAACTCCAATCAGGTCCTCTCCCAGACCTTCTCCACCCCCATCTCCGTCACTTCGTCGAGCCCAATATGTTCGGAGACCTCCAATCAGGTCCTCTCTCATACCTTCTTCACCGCCATCTCCATCACTTCGTCACATTAGGCCTCCTTTCAACTTCCCGTCATCGCTCGCTCCCTGATCAACTCAACTCGCTTTTATTCTCATTACTCTACAGTGTACAAACAAATATCATCCTATGCTCTCTGTATCAAACCATAGTGCATAAAGTCTTAGATCTTCCTTTTTTCTTTTTTTTTTTTTTTTTCTTTTCTATATATAAAGTTTATGTACTTGAGGAATAAGTAAAGTCTATGAAATTGGAAAATTATGCCTCCTTGGGTTGGATGTTGTGAAAAGGCCTCTAAGCATAACAACATACATCTCAAATGACTATCTACTATTCCATTGTTTCTATTTTACTTGCATTATTTAAAGCTCCAAAATTCTTGTACACTTGATATTGATATTTCACAAATTGAAAGCTAGGGAGGGGGGTCAGAAAGTAGTAATTTTTCACGTAACTTGTATTTATACTGATAATAATAGAACACCACATGATAAACTTTGTGTATTGAACCAAAATACAATTCACCTTCCAAGATTATGTTTTGCCTTGGGACCTAACTAGCCAAATGCCCAGACTGCCAAACACAAGAACTGTACAAAGCCAAGTAATTCTGCAGCTATTCTTTTATAGTCCATACAACTAGTTCCAAACAAAATCATTTTTTTTTCATGCAATAGCAGGAAACAATGATCCTAAAAATAGATAAGGAATCAACCCCTACACCCATGTACAAACCGAACCCCACGAAACTCTCCTTTCTTCATTTCGTTGTGGCCTTATCAATTACCTGAGTTTTATTTTTCGTCATCCACGGTTTCCTTAATCTTCTTCATG CTCTCTTACATGCAACGATATAATATTGTCAGTCACATTGTGACGACTCTAGGGATAATCCCTATCGTTATATATGGCAAATTTTACTTGCCAAATCTTGAGAGTAGCAGCAACTTTTCAAGAAGCCTTAGTTTGGAAATATGTTAATGGAGTTTGGCTTTGTTTTCTACAACAAAAGCAAGCACTGGAAATCTTGTAAAGGCATCGTTTCATTCAAATCCTAAACTCCCTTAATGGTGTCTCTTGGACCCTATTAAATACCAAAGCCCTTCCCCTAATCCCTTCTTCTTCTTCAAGAACAAAGTTAGTTTTCTTTTCTTCTTTTCTTTTTCTTTAATATTAAGTAGATGGCTTCTTCTTCCTCGTCTCTGCAAGACACTATTAATTACACTATAACACAAGAAGAGTTCAACATGTTTCACACGATCGACCGAAAGCTTTTTAGTCGAATGGTTTTTTCCCTGGGTCGGGAGCCGGACGAGTCGGTTCGAGTGATGGGATTTTGGCTTTGGCTGGAAAAAAATGGTGAAGAGTCGAGTTTGGTTTACAAAATATTGGGTTTGCCAGACGTTTTGGTTGATGCACTTTGTGATGAAGCCGTCATGTCCTTGGCTTGTATAGAAAACGACAAATTCCCATTTGAACCGGATTCGACCGTAGATGTTCCTCTCATTCAACACGTTTCTAAAACTCCGGTTTCTCTCCGGTTCTTCCACCTAAACCGGCTCGGAATCCTCCGTGGCGTTACCAAGATGTGTAACGATATCTGCAATAGAGCCTTTCTTGATATTCTCCAAGCGCTTCATACACGGCGCGCGATATCACGCGCCCCCGCTGCCGTATCCATTCCGGCAGTTCAAGGCGAAGGCGGCCGTGGAAGGGTCTTTGAGGGCCGGGCTCCTCCGGTGAGTAAATTTTTTGTACCAAGTATTGGGTTTTTAGGGTTGAGGGGAGAGGGTTCGACGGCGGCGATTCGGAGTGGAATGAGTAGTTTGGAGTTGAAAAGTGGGAAGGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGGGGAAGCGATTCCGGCGGATCAAAGGACCATTTTTCTGACTTTCTCGAAAGGATACCCAATTTCTGAAGATGAAGTTAGAGACTTTTTTGGCAGAAGATATGGGGATTTCATAGAGAGCATTCACATGCAAGAGGCACACCCACCGGAGCAACCGCTGTACGCCCGGCTCGTGGTGAAAACAGAGTCCTACATCGACCTCGTCCTCGAAGCAAGAACCAAGGCTAAATTTTCCATCAACGGTAAACACGTGTGGGCTCGAAAATATGTTCGTAAAACTCCAATCAGGTCCTCTCCCAGACCTTCTCCACCCCCATCTCCGTCACTTCGTCGAGCCCAATATGTTCGGAGACCTCCAATCAGGTCCTCTCTCATACCTTCTTCACCGCCATCTCCATCACTTCGTCACATTAGGCCTCCTTTCAACTTCCCGTCATCGCTCGCTCCCTGATCAACTCAACTCGCTTTTATTCTCATTACTCTACAGTGTACAAACAAATATCATCCTATGCTCTCTGTATCAAACCATAGTGCATAAAGTCTTAGATCTTCCTTTTTTCTTTTTTTTTTTTTTTTTCTTTTCTATATATAAAGTTTATGTACTTGAGGAATAAGTAAAGTCTATGAAATTGGAAAATTATGCCTCCTTGGGTTGGATGTTGTGAAAAGGCCTCTAAGCATAACAACATACATCTCAAATGACTATCTACTATTCCATTGTTTCTATTTTACTTGCATTATTTAAAGCTCCAAAATTCTTGTACACTTGATATTGATATTTCACAAATTGAAAGCTAGGGAGGGGGGTCAGAAAGTAGTAATTTTTCACGTAACTTGTATTTATACTGATAATAATAGAACACCACATGATAAACTTTGTGTATTGAACCAAAATACAATTCACCTTCCAAGATTATGTTTTGCCTTGGGACCTAACTAGCCAAATGCCCAGACTGCCAAACACAAGAACTGTACAAAGCCAAGTAATTCTGCAGCTATTCTTTTATAGTCCATACAACTAGTTCCAAACAAAATCATTTTTTTTTCATGCAATAGCAGGAAACAATGATCCTAAAAATAGATAAGGAATCAACCCCTACACCCATGTACAAACCGAACCCCACGAAACTCTCCTTTCTTCATTTCGTTGTGGCCTTATCAATTACCTGAGTTTTATTTTTCGTCATCCACGGTTTCCTTAATCTTCTTCATG ATGGCTTCTTCTTCCTCGTCTCTGCAAGACACTATTAATTACACTATAACACAAGAAGAGTTCAACATGTTTCACACGATCGACCGAAAGCTTTTTAGTCGAATGGTTTTTTCCCTGGGTCGGGAGCCGGACGAGTCGGTTCGAGTGATGGGATTTTGGCTTTGGCTGGAAAAAAATGGTGAAGAGTCGAGTTTGGTTTACAAAATATTGGGTTTGCCAGACGTTTTGGTTGATGCACTTTGTGATGAAGCCGTCATGTCCTTGGCTTGTATAGAAAACGACAAATTCCCATTTGAACCGGATTCGACCGTAGATGTTCCTCTCATTCAACACGTTTCTAAAACTCCGGTTTCTCTCCGGTTCTTCCACCTAAACCGGCTCGGAATCCTCCGTGGCGTTACCAAGATGTGTAACGATATCTGCAATAGAGCCTTTCTTGATATTCTCCAAGCGCTTCATACACGGCGCGCGATATCACGCGCCCCCGCTGCCGTATCCATTCCGGCAGTTCAAGGCGAAGGCGGCCGTGGAAGGGTCTTTGAGGGCCGGGCTCCTCCGGTGAGTAAATTTTTTGTACCAAGTATTGGGTTTTTAGGGTTGAGGGGAGAGGGTTCGACGGCGGCGATTCGGAGTGGAATGAGTAGTTTGGAGTTGAAAAGTGGGAAGGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGGGGAAGCGATTCCGGCGGATCAAAGGACCATTTTTCTGACTTTCTCGAAAGGATACCCAATTTCTGAAGATGAAGTTAGAGACTTTTTTGGCAGAAGATATGGGGATTTCATAGAGAGCATTCACATGCAAGAGGCACACCCACCGGAGCAACCGCTGTACGCCCGGCTCGTGGTGAAAACAGAGTCCTACATCGACCTCGTCCTCGAAGCAAGAACCAAGGCTAAATTTTCCATCAACGGTAAACACGTGTGGGCTCGAAAATATGTTCGTAAAACTCCAATCAGGTCCTCTCCCAGACCTTCTCCACCCCCATCTCCGTCACTTCGTCGAGCCCAATATGTTCGGAGACCTCCAATCAGGTCCTCTCTCATACCTTCTTCACCGCCATCTCCATCACTTCGTCACATTAGGCCTCCTTTCAACTTCCCGTCATCGCTCGCTCCCTGA MASSSSSLQDTINYTITQEEFNMFHTIDRKLFSRMVFSLGREPDESVRVMGFWLWLEKNGEESSLVYKILGLPDVLVDALCDEAVMSLACIENDKFPFEPDSTVDVPLIQHVSKTPVSLRFFHLNRLGILRGVTKMCNDICNRAFLDILQALHTRRAISRAPAAVSIPAVQGEGGRGRVFEGRAPPVSKFFVPSIGFLGLRGEGSTAAIRSGMSSLELKSGKEEEEEEGEEEGEAIPADQRTIFLTFSKGYPISEDEVRDFFGRRYGDFIESIHMQEAHPPEQPLYARLVVKTESYIDLVLEARTKAKFSINGKHVWARKYVRKTPIRSSPRPSPPPSPSLRRAQYVRRPPIRSSLIPSSPPSPSLRHIRPPFNFPSSLAP Homology
BLAST of MELO3C025499.1 vs. NCBI nr
Match: XP_008463565.2 (PREDICTED: uncharacterized protein LOC103501679 [Cucumis melo]) HSP 1 Score: 750.7 bits (1937), Expect = 6.0e-213 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
BLAST of MELO3C025499.1 vs. NCBI nr
Match: TYK05734.1 (uncharacterized protein E5676_scaffold98G002190 [Cucumis melo var. makuwa]) HSP 1 Score: 636.3 bits (1640), Expect = 1.6e-178 Identity = 333/381 (87.40%), Postives = 333/381 (87.40%), Query Frame = 0
BLAST of MELO3C025499.1 vs. NCBI nr
Match: XP_004143836.1 (uncharacterized protein LOC101221230 [Cucumis sativus] >KGN51236.1 hypothetical protein Csa_008375 [Cucumis sativus]) HSP 1 Score: 573.9 bits (1478), Expect = 1.0e-159 Identity = 297/337 (88.13%), Postives = 311/337 (92.28%), Query Frame = 0
BLAST of MELO3C025499.1 vs. NCBI nr
Match: XP_038889233.1 (uncharacterized protein LOC120079123 [Benincasa hispida]) HSP 1 Score: 471.9 bits (1213), Expect = 5.4e-129 Identity = 263/389 (67.61%), Postives = 287/389 (73.78%), Query Frame = 0
BLAST of MELO3C025499.1 vs. NCBI nr
Match: XP_023529203.1 (uncharacterized protein LOC111792024 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 456.4 bits (1173), Expect = 2.3e-124 Identity = 255/386 (66.06%), Postives = 290/386 (75.13%), Query Frame = 0
BLAST of MELO3C025499.1 vs. ExPASy TrEMBL
Match: A0A1S3CJK2 (uncharacterized protein LOC103501679 OS=Cucumis melo OX=3656 GN=LOC103501679 PE=4 SV=1) HSP 1 Score: 750.7 bits (1937), Expect = 2.9e-213 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
BLAST of MELO3C025499.1 vs. ExPASy TrEMBL
Match: A0A5D3C358 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002190 PE=4 SV=1) HSP 1 Score: 636.3 bits (1640), Expect = 8.0e-179 Identity = 333/381 (87.40%), Postives = 333/381 (87.40%), Query Frame = 0
BLAST of MELO3C025499.1 vs. ExPASy TrEMBL
Match: A0A0A0KU25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G497010 PE=4 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 4.9e-160 Identity = 297/337 (88.13%), Postives = 311/337 (92.28%), Query Frame = 0
BLAST of MELO3C025499.1 vs. ExPASy TrEMBL
Match: A0A6J1JIJ6 (uncharacterized protein LOC111487260 OS=Cucurbita maxima OX=3661 GN=LOC111487260 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 1.5e-124 Identity = 254/388 (65.46%), Postives = 291/388 (75.00%), Query Frame = 0
BLAST of MELO3C025499.1 vs. ExPASy TrEMBL
Match: A0A6J1GZS4 (uncharacterized protein LOC111458632 OS=Cucurbita moschata OX=3662 GN=LOC111458632 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 1.2e-123 Identity = 253/384 (65.89%), Postives = 288/384 (75.00%), Query Frame = 0
BLAST of MELO3C025499.1 vs. TAIR 10
Match: AT1G49290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 191.0 bits (484), Expect = 1.7e-48 Identity = 120/334 (35.93%), Postives = 182/334 (54.49%), Query Frame = 0
BLAST of MELO3C025499.1 vs. TAIR 10
Match: AT5G13620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 166.4 bits (420), Expect = 4.5e-41 Identity = 113/337 (33.53%), Postives = 171/337 (50.74%), Query Frame = 0
BLAST of MELO3C025499.1 vs. TAIR 10
Match: AT1G64870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 133.3 bits (334), Expect = 4.2e-31 Identity = 96/320 (30.00%), Postives = 151/320 (47.19%), Query Frame = 0
BLAST of MELO3C025499.1 vs. TAIR 10
Match: AT3G45200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 95 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.6 bits (301), Expect = 2.8e-27 Identity = 90/321 (28.04%), Postives = 144/321 (44.86%), Query Frame = 0
BLAST of MELO3C025499.1 vs. TAIR 10
Match: AT5G11220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23 Identity = 79/285 (27.72%), Postives = 137/285 (48.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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