MELO3C024829.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C024829.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	classical arabinogalactan protein 4
Location	chr07: 17462767 .. 17463342 (-)
Sequence length	576
RNA-Seq Expression	MELO3C024829.1
Synteny	MELO3C024829.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCCACCCTTCTCAATCTTCTCACTCTAGCCTTCCTGCTTATCTCCGCCGCTGCCAACTCCCCGGCACCCTCTCCAGCACCGAGCGCCGAATCACCAACGTGGAAATGGACGCCCACTAACCAACCACCCTCCTCTCCACCCACGGCGGAACCGCCAATGACTACAACTTCTCCACCTTCGCCTACAATATCTCCCCCCGCCACCCCCCCGGAGCTCAGCCCCGTTCCATCATCCTATTCACCCACTTCGCCGCCCATGGCTAACCCACCTACATTGTCGCCGACAGCTCCACCGCCGGCAGTCACGAGTCCCAGTCATGCCCCGTCGCCGGCGAAAACAAAAGCACCGGCTCCAGCTCCATCCAAAATTAGTCCGGCCCCAGCAAAGGCACCGAAATCTTCTAAAGCTCCGGTGAGTAGTCCTCCGTCACCGAATGGACAGATGGAGCCACCGACGCCATCCGAAGCTCCGGCACCGTCGAAGGAGGGTAACGGCGCCGGTGCAAACAGATTCGCCATTGGTGGGTCTATTGCAGCTGGATTTATGATTGCGGCTTTCATCGCTTAA

mRNA sequence

ATGGCTTCCTCCACCCTTCTCAATCTTCTCACTCTAGCCTTCCTGCTTATCTCCGCCGCTGCCAACTCCCCGGCACCCTCTCCAGCACCGAGCGCCGAATCACCAACGTGGAAATGGACGCCCACTAACCAACCACCCTCCTCTCCACCCACGGCGGAACCGCCAATGACTACAACTTCTCCACCTTCGCCTACAATATCTCCCCCCGCCACCCCCCCGGAGCTCAGCCCCGTTCCATCATCCTATTCACCCACTTCGCCGCCCATGGCTAACCCACCTACATTGTCGCCGACAGCTCCACCGCCGGCAGTCACGAGTCCCAGTCATGCCCCGTCGCCGGCGAAAACAAAAGCACCGGCTCCAGCTCCATCCAAAATTAGTCCGGCCCCAGCAAAGGCACCGAAATCTTCTAAAGCTCCGGTGAGTAGTCCTCCGTCACCGAATGGACAGATGGAGCCACCGACGCCATCCGAAGCTCCGGCACCGTCGAAGGAGGGTAACGGCGCCGGTGCAAACAGATTCGCCATTGGTGGGTCTATTGCAGCTGGATTTATGATTGCGGCTTTCATCGCTTAA

Coding sequence (CDS)

ATGGCTTCCTCCACCCTTCTCAATCTTCTCACTCTAGCCTTCCTGCTTATCTCCGCCGCTGCCAACTCCCCGGCACCCTCTCCAGCACCGAGCGCCGAATCACCAACGTGGAAATGGACGCCCACTAACCAACCACCCTCCTCTCCACCCACGGCGGAACCGCCAATGACTACAACTTCTCCACCTTCGCCTACAATATCTCCCCCCGCCACCCCCCCGGAGCTCAGCCCCGTTCCATCATCCTATTCACCCACTTCGCCGCCCATGGCTAACCCACCTACATTGTCGCCGACAGCTCCACCGCCGGCAGTCACGAGTCCCAGTCATGCCCCGTCGCCGGCGAAAACAAAAGCACCGGCTCCAGCTCCATCCAAAATTAGTCCGGCCCCAGCAAAGGCACCGAAATCTTCTAAAGCTCCGGTGAGTAGTCCTCCGTCACCGAATGGACAGATGGAGCCACCGACGCCATCCGAAGCTCCGGCACCGTCGAAGGAGGGTAACGGCGCCGGTGCAAACAGATTCGCCATTGGTGGGTCTATTGCAGCTGGATTTATGATTGCGGCTTTCATCGCTTAA

Protein sequence

MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTSPPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPAPAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSIAAGFMIAAFIA

Homology

[Close]

BLAST of MELO3C024829.1 vs. NCBI nr
Match: XP_008462882.1 (PREDICTED: classical arabinogalactan protein 4 [Cucumis melo] >KAA0061156.1 classical arabinogalactan protein 4 [Cucumis melo var. makuwa] >TYK29917.1 classical arabinogalactan protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 322.0 bits (824), Expect = 3.4e-84
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS
Sbjct: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
           PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI
Sbjct: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AAGFMIAAFIA 192
           AAGFMIAAFIA
Sbjct: 181 AAGFMIAAFIA 191

[Close]

BLAST of MELO3C024829.1 vs. NCBI nr
Match: XP_011654351.1 (classical arabinogalactan protein 4 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 9.1e-77
Identity = 179/191 (93.72%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTS
Sbjct: 1   MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTS 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
           PPSPTISPP TPPELSPVP+SY+PTSPPMANPPTLSPTAPPPAV SPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKSPSHAPSPAKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAIGGSI
Sbjct: 121 PAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AAGFMIAAFIA 192
            AG MIAAFIA
Sbjct: 181 -AGLMIAAFIA 190

[Close]

BLAST of MELO3C024829.1 vs. NCBI nr
Match: KAE8649311.1 (hypothetical protein Csa_014808 [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 5.2e-72
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTS
Sbjct: 1   MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTS 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
           PPSPTISPP TPPELSPVP+SY+PTSPPMANPPTLSPTAPPPAV SPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKSPSHAPSPAKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAI 177
           PAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAI
Sbjct: 121 PAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAI 176

[Close]

BLAST of MELO3C024829.1 vs. NCBI nr
Match: XP_038877309.1 (vegetative cell wall protein gp1-like [Benincasa hispida])

HSP 1 Score: 255.8 bits (652), Expect = 3.0e-64
Identity = 156/191 (81.68%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MASST+L +LT+A LLISAAANSP PSPAP  ESP WKWTP+N+PPSSPP AEPPM TTS
Sbjct: 1   MASSTVLIVLTVALLLISAAANSPVPSPAPGPESPAWKWTPSNEPPSSPPMAEPPM-TTS 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
           PPSPTISPPATPPE+SP+PSSY+PT PP ANPPTLSPTA PP V SPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPATPPEISPIPSSYAPTLPPKANPPTLSPTAQPPVVKSPSHAPSPAKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSK+SP+PAKAPKSSKAP SSPPSPNG MEPP PS APAPSK+ NG  ANRFAIGGS+
Sbjct: 121 PAPSKMSPSPAKAPKSSKAPASSPPSPNGMMEPPAPSVAPAPSKKDNGGAANRFAIGGSV 180

Query: 181 AAGFMIAAFIA 192
           A G MIAA IA
Sbjct: 181 AVGLMIAALIA 190

[Close]

BLAST of MELO3C024829.1 vs. NCBI nr
Match: KAG7014869.1 (hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.8 bits (512), Expect = 5.2e-48
Identity = 133/191 (69.63%), Postives = 145/191 (75.92%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MAS  +LN++T A LLISAAANSP PSPAPS ESP WKWTP  + PSSPP  EPP     
Sbjct: 1   MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP----- 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
                 SP  +PPELSPVPSS +PTSPP ANPPTLSP A PPAV SP HAPSP+KTKAPA
Sbjct: 61  ------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAPSPSKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSK+SP PA+APKSS  PVSSPP+PNG+MEPPTPS AP   K  NG  ANRFAIGGS+
Sbjct: 121 PAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSV 180

Query: 181 AAGFMIAAFIA 192
           A G M AA IA
Sbjct: 181 AFGLMAAALIA 180

[Close]

BLAST of MELO3C024829.1 vs. ExPASy TrEMBL
Match: A0A5A7V3Q7 (Classical arabinogalactan protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00010 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.7e-84
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS
Sbjct: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
           PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI
Sbjct: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AAGFMIAAFIA 192
           AAGFMIAAFIA
Sbjct: 181 AAGFMIAAFIA 191

[Close]

BLAST of MELO3C024829.1 vs. ExPASy TrEMBL
Match: A0A1S3CHW9 (classical arabinogalactan protein 4 OS=Cucumis melo OX=3656 GN=LOC103501160 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.7e-84
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS
Sbjct: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
           PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI
Sbjct: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AAGFMIAAFIA 192
           AAGFMIAAFIA
Sbjct: 181 AAGFMIAAFIA 191

[Close]

BLAST of MELO3C024829.1 vs. ExPASy TrEMBL
Match: A0A0A0L0Q7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111610 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.4e-77
Identity = 179/191 (93.72%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTS
Sbjct: 1   MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTS 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
           PPSPTISPP TPPELSPVP+SY+PTSPPMANPPTLSPTAPPPAV SPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKSPSHAPSPAKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAIGGSI
Sbjct: 121 PAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AAGFMIAAFIA 192
            AG MIAAFIA
Sbjct: 181 -AGLMIAAFIA 190

[Close]

BLAST of MELO3C024829.1 vs. ExPASy TrEMBL
Match: A0A6J1E3R0 (extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111430527 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 6.2e-47
Identity = 131/191 (68.59%), Postives = 144/191 (75.39%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MAS  +LN++T A LLISA+ANSP PSPAPS ESP WKWTP    PSSPP  EPP     
Sbjct: 1   MASFAVLNVITAALLLISASANSPLPSPAPSPESPPWKWTPDTDSPSSPPEMEPP----- 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
                 SP  +PPELSPVPSS +PTSPP ANPPTLSP A PPAV SP HAPSP+KTKAPA
Sbjct: 61  ------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAPSPSKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSK+S  PA+APKSS APVSSPP+PNG+MEPPTPS AP   K  NG  ANRFAIGG++
Sbjct: 121 PAPSKMSSTPARAPKSSAAPVSSPPAPNGEMEPPTPSVAPTAPKAENGGAANRFAIGGTV 180

Query: 181 AAGFMIAAFIA 192
           A G M AA IA
Sbjct: 181 AFGLMAAALIA 180

[Close]

BLAST of MELO3C024829.1 vs. ExPASy TrEMBL
Match: A0A6J1JCM0 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111483194 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 127/191 (66.49%), Postives = 140/191 (73.30%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60
           MAS  +LN++T A LLISA+ANSP PS APS ES  WKWTP  + PSSPP  EPP     
Sbjct: 1   MASFAVLNVITAALLLISASANSPLPSTAPSPESQPWKWTPDTESPSSPPEMEPP----- 60

Query: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120
                 SP  +PPELSPVPSS +PTSP  ANPPTLSP A PPAV SP HAPSP+KTKAPA
Sbjct: 61  ------SPSVSPPELSPVPSSDTPTSPSDANPPTLSPAALPPAVKSPVHAPSPSKTKAPA 120

Query: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180
           PAPSK+SP PA+APKSS AP SSPP+PNG+MEPPTPS AP   K  NG  ANRFAI  S+
Sbjct: 121 PAPSKMSPTPARAPKSSAAPASSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAISWSV 180

Query: 181 AAGFMIAAFIA 192
           A G M AA IA
Sbjct: 181 AFGLMAAALIA 180

[Close]

BLAST of MELO3C024829.1 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 41.6 bits (96), Expect = 8.4e-04
Identity = 80/190 (42.11%), Postives = 98/190 (51.58%), Query Frame = 0


Query: 1   MASSTLLNLLTLAFLLISA---AANSPAPSPAPS---AESPTWKWTPTN----------- 60
           M S++++  L LA  LIS+    A  PA SP  S   A  PT    PT            
Sbjct: 1   MESNSIIWSLLLASALISSFSVNAQGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPP 60

Query: 61  ----QPPSSPPTAEPPMTTTSPPSPTISP---PATPPELSPVPSSYSPTSPPMANPPTLS 120
               QPP+SP T  P +T TSPP+P ++P   PATPP   P P    P S P  +PP   
Sbjct: 61  VSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPP---PQPPQSPPASAPTVSPP--- 120

Query: 121 PTAPPPAVTSPSHAPSPAKTKAPAPAPSKISPAPAKAPKSSKAPVSSPP--SPNGQMEPP 165
           P +PPPA TSP   P+PA   +P PAP+   PAPA  P    APVS PP  +P+    PP
Sbjct: 121 PVSPPPAPTSP--PPTPA---SPPPAPASPPPAPASPP---PAPVSPPPVQAPSPISLPP 174

The following BLAST results are available for this feature:

BLAST of MELO3C024829.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462882.1	3.4e-84	100.00	PREDICTED: classical arabinogalactan protein 4 [Cucumis melo] >KAA0061156.1 clas...	[more]
XP_011654351.1	9.1e-77	93.72	classical arabinogalactan protein 4 [Cucumis sativus]	[more]
KAE8649311.1	5.2e-72	94.32	hypothetical protein Csa_014808 [Cucumis sativus]	[more]
XP_038877309.1	3.0e-64	81.68	vegetative cell wall protein gp1-like [Benincasa hispida]	[more]
KAG7014869.1	5.2e-48	69.63	hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MELO3C024829.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C024829.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3Q7	1.7e-84	100.00	Classical arabinogalactan protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CHW9	1.7e-84	100.00	classical arabinogalactan protein 4 OS=Cucumis melo OX=3656 GN=LOC103501160 PE=4...	[more]
A0A0A0L0Q7	4.4e-77	93.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111610 PE=4 SV=1	[more]
A0A6J1E3R0	6.2e-47	68.59	extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111430527 PE=4 SV=1	[more]
A0A6J1JCM0	1.1e-43	66.49	extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111483194 PE=4 SV=1	[more]

BLAST of MELO3C024829.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68725.1	8.4e-04	42.11	arabinogalactan protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 19..40 score: 29.09 coord: 60..77 score: 38.89 coord: 41..57 score: 30.59 coord: 81..106 score: 33.85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..173

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C024829	MELO3C024829	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C024829.1:exon:213423	MELO3C024829.1:exon:213423	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C024829.1:cds	MELO3C024829.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C024829.1	MELO3C024829.1-protein	polypeptide