MELO3C023611.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C023611.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 32337859 .. 32338197 (+)
Sequence length	339
RNA-Seq Expression	MELO3C023611.1
Synteny	MELO3C023611.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCCCACCTCTTCTAACGGTTGCACCAAACCCATCATTCCAATTTGTCAGCCTCCTACCACTGATGTGCAACTTAAGAACTGCAACAAAACAGGGGAGGAAAATGGTGAGAGGAAAGAAGAAAGAAGTGAGTACCCTGTGAAGAAGGAGGTTTTTGTGATTAAGCACAGAAAAAGCCATGATGGAAGAGATAAGAATGGGGGTTCTCTTGTTCCATCTCAAGAGGGGAATGGTCATGTTTTCTCTGCTGGTACTCCTACTGTGTCTTCTTCTTCCTGTGAAATTTTGGAGTCTGGAGCTATGGGGGAAAATTTGAAGGTGGGTTTGGTCCGAACTTAG

mRNA sequence

GATCCCACCTCTTCTAACGGTTGCACCAAACCCATCATTCCAATTTGTCAGCCTCCTACCACTGATGTGCAACTTAAGAACTGCAACAAAACAGGGGAGGAAAATGGTGAGAGGAAAGAAGAAAGAAGTGAGTACCCTGTGAAGAAGGAGGTTTTTGTGATTAAGCACAGAAAAAGCCATGATGGAAGAGATAAGAATGGGGGTTCTCTTGTTCCATCTCAAGAGGGGAATGGTCATGTTTTCTCTGCTGGTACTCCTACTGTGTCTTCTTCTTCCTGTGAAATTTTGGAGTCTGGAGCTATGGGGGAAAATTTGAAGGTGGGTTTGGTCCGAACTTAG

Coding sequence (CDS)

GATCCCACCTCTTCTAACGGTTGCACCAAACCCATCATTCCAATTTGTCAGCCTCCTACCACTGATGTGCAACTTAAGAACTGCAACAAAACAGGGGAGGAAAATGGTGAGAGGAAAGAAGAAAGAAGTGAGTACCCTGTGAAGAAGGAGGTTTTTGTGATTAAGCACAGAAAAAGCCATGATGGAAGAGATAAGAATGGGGGTTCTCTTGTTCCATCTCAAGAGGGGAATGGTCATGTTTTCTCTGCTGGTACTCCTACTGTGTCTTCTTCTTCCTGTGAAATTTTGGAGTCTGGAGCTATGGGGGAAAATTTGAAGGTGGGTTTGGTCCGAACTTAG

Protein sequence

DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSHDGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT

Homology

[Close]

BLAST of MELO3C023611.1 vs. NCBI nr
Match: KAA0058560.1 (uncharacterized protein E6C27_scaffold339G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 5.2e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH
Sbjct: 2   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 61

Query: 61  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT
Sbjct: 62  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113

[Close]

BLAST of MELO3C023611.1 vs. NCBI nr
Match: XP_008463173.1 (PREDICTED: uncharacterized protein At1g65710 [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTSSN CTKPIIPI QPPTTDVQLK CNKTGEENGERKEERSEYPVKKEVFVIKHRKSH
Sbjct: 83  DPTSSNVCTKPIIPISQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 142

Query: 61  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNGGSLVPSQEGNGH+FSA TPTVSSSSCEILESGA+GEN+KVGLVRT
Sbjct: 143 DGRDKNGGSLVPSQEGNGHIFSAATPTVSSSSCEILESGAVGENMKVGLVRT 194

[Close]

BLAST of MELO3C023611.1 vs. NCBI nr
Match: KAA0046222.1 (uncharacterized protein E6C27_scaffold284G00130 [Cucumis melo var. makuwa] >TYK18973.1 uncharacterized protein E5676_scaffold418G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTSSN CTKPIIPI QPPTTDVQLK CNKTGEENGERKEERSEYPVKKEVFVIKHRKSH
Sbjct: 25  DPTSSNVCTKPIIPISQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 84

Query: 61  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNGGSLVPSQEGNGH+FSA TPTVSSSSCEILESGA+GEN+KVGLVRT
Sbjct: 85  DGRDKNGGSLVPSQEGNGHIFSAATPTVSSSSCEILESGAVGENMKVGLVRT 136

[Close]

BLAST of MELO3C023611.1 vs. NCBI nr
Match: XP_004140353.1 (uncharacterized protein At1g65710 [Cucumis sativus] >KGN51075.1 hypothetical protein Csa_008204 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 9.5e-50
Identity = 103/112 (91.96%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTSSNGCTKPIIPI QPPTTDV LK CN TGEENGERKEERSEYPVKKEVFVIKHRKSH
Sbjct: 25  DPTSSNGCTKPIIPISQPPTTDVPLKTCNITGEENGERKEERSEYPVKKEVFVIKHRKSH 84

Query: 61  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNGGSL+PSQ GNGHVFSA TPTVSSSSCEI ESGA+GENLKVGLVRT
Sbjct: 85  DGRDKNGGSLLPSQVGNGHVFSAATPTVSSSSCEIFESGAVGENLKVGLVRT 136

[Close]

BLAST of MELO3C023611.1 vs. NCBI nr
Match: XP_038882097.1 (uncharacterized protein At1g65710-like [Benincasa hispida])

HSP 1 Score: 179.5 bits (454), Expect = 1.6e-41
Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTS NGC KPIIP+ QPPT DV+LK CN+TGE NGE KEERSEYPVKKEVFVIKHRKSH
Sbjct: 25  DPTSCNGC-KPIIPMSQPPTIDVKLKTCNETGEGNGEGKEERSEYPVKKEVFVIKHRKSH 84

Query: 61  DGRDKNGGSLV-PSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNG SL+ P QE NG VFSA TPTVSSSSCEILESGA+GENLKVGLVRT
Sbjct: 85  DGRDKNGASLLPPPQEVNGLVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 136

[Close]

BLAST of MELO3C023611.1 vs. ExPASy TrEMBL
Match: A0A5A7UU62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00270 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.5e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH
Sbjct: 2   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 61

Query: 61  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT
Sbjct: 62  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113

[Close]

BLAST of MELO3C023611.1 vs. ExPASy TrEMBL
Match: A0A5D3D646 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00660 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.4e-52
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTSSN CTKPIIPI QPPTTDVQLK CNKTGEENGERKEERSEYPVKKEVFVIKHRKSH
Sbjct: 25  DPTSSNVCTKPIIPISQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 84

Query: 61  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNGGSLVPSQEGNGH+FSA TPTVSSSSCEILESGA+GEN+KVGLVRT
Sbjct: 85  DGRDKNGGSLVPSQEGNGHIFSAATPTVSSSSCEILESGAVGENMKVGLVRT 136

[Close]

BLAST of MELO3C023611.1 vs. ExPASy TrEMBL
Match: A0A1S3CIK4 (uncharacterized protein At1g65710 OS=Cucumis melo OX=3656 GN=LOC103501379 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.4e-52
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTSSN CTKPIIPI QPPTTDVQLK CNKTGEENGERKEERSEYPVKKEVFVIKHRKSH
Sbjct: 83  DPTSSNVCTKPIIPISQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 142

Query: 61  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNGGSLVPSQEGNGH+FSA TPTVSSSSCEILESGA+GEN+KVGLVRT
Sbjct: 143 DGRDKNGGSLVPSQEGNGHIFSAATPTVSSSSCEILESGAVGENMKVGLVRT 194

[Close]

BLAST of MELO3C023611.1 vs. ExPASy TrEMBL
Match: A0A0A0KN73 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G429970 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.6e-50
Identity = 103/112 (91.96%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           DPTSSNGCTKPIIPI QPPTTDV LK CN TGEENGERKEERSEYPVKKEVFVIKHRKSH
Sbjct: 25  DPTSSNGCTKPIIPISQPPTTDVPLKTCNITGEENGERKEERSEYPVKKEVFVIKHRKSH 84

Query: 61  DGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNGGSL+PSQ GNGHVFSA TPTVSSSSCEI ESGA+GENLKVGLVRT
Sbjct: 85  DGRDKNGGSLLPSQVGNGHVFSAATPTVSSSSCEIFESGAVGENLKVGLVRT 136

[Close]

BLAST of MELO3C023611.1 vs. ExPASy TrEMBL
Match: A0A6J1K1Y2 (uncharacterized protein At1g65710-like OS=Cucurbita maxima OX=3661 GN=LOC111489382 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.3e-32
Identity = 83/114 (72.81%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 1   DPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 60
           D +S NG  KPIIPI QPPTTD++ K+  KTG+ENGE KEERSEYPVKKEVFVIKHRKSH
Sbjct: 23  DTSSCNG-GKPIIPISQPPTTDLKSKSSKKTGQENGEWKEERSEYPVKKEVFVIKHRKSH 82

Query: 61  DGRDKNGGSLV--PSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113
           DGRDKNG SL+  P +EGN          VSSSSCEILESGA+GENLKVGLVRT
Sbjct: 83  DGRDKNGASLLVPPPEEGN----------VSSSSCEILESGALGENLKVGLVRT 125

The following BLAST results are available for this feature:

BLAST of MELO3C023611.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058560.1	5.2e-56	100.00	uncharacterized protein E6C27_scaffold339G00270 [Cucumis melo var. makuwa]	[more]
XP_008463173.1	1.3e-51	93.75	PREDICTED: uncharacterized protein At1g65710 [Cucumis melo]	[more]
KAA0046222.1	1.3e-51	93.75	uncharacterized protein E6C27_scaffold284G00130 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_004140353.1	9.5e-50	91.96	uncharacterized protein At1g65710 [Cucumis sativus] >KGN51075.1 hypothetical pro...	[more]
XP_038882097.1	1.6e-41	84.07	uncharacterized protein At1g65710-like [Benincasa hispida]	[more]

BLAST of MELO3C023611.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C023611.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UU62	2.5e-56	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D646	6.4e-52	93.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CIK4	6.4e-52	93.75	uncharacterized protein At1g65710 OS=Cucumis melo OX=3656 GN=LOC103501379 PE=4 S...	[more]
A0A0A0KN73	4.6e-50	91.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G429970 PE=4 SV=1	[more]
A0A6J1K1Y2	3.3e-32	72.81	uncharacterized protein At1g65710-like OS=Cucurbita maxima OX=3661 GN=LOC1114893...	[more]

BLAST of MELO3C023611.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..89

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C023611	MELO3C023611	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C023611.1:exon:35073	MELO3C023611.1:exon:35073	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C023611.1:cds	MELO3C023611.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C023611.1	MELO3C023611.1-protein	polypeptide