MELO3C022491.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C022491.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ycf20-like protein
Location	chr11: 31576019 .. 31578626 (+)
Sequence length	1121
RNA-Seq Expression	MELO3C022491.1
Synteny	MELO3C022491.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTAAAAAAAAAAATAATAGAAAGACCATAAAATTTATTGGCTAGAAAGATGGAGAAGGATTGTCTATCCGATGTTGAAGGTACGACGCCAAAAAATTGCCCCCAGACTAAGACCGCCGATTGCTGGAAGAGACGAACACTTCTTGCAGCTAAACCTCTATGGGAGTAGCGTCAAAGATACTCTGAGAGCTTGCTTGGCCTCCCATGTTGATCAGTGAGCACTCTATTCGACTTATTTCGTGATCTTCTGGTCAATATTACTTCTATTTTCTCTCTCTGCAACCTGTTGCTGTTTATTTTCTAAAAAGGAATCAGAGATGTTAAAGAGAACTTGTTCAGGTTTGTATGAATAATCGTTGAGAAAAAAATAGAGTGAATTTAGGGAAGAACTTATCTCAGAAGCTTTCTCTGTTGATTGTAATCTCGAGTACACTGAGCTTGAAGATCTTGTACAGTGTATGTAGCTACAATTGGCTGTGTGTTTCTTCATCTTTTATTTCAAGTTGTGAGTGAGTGAATGTTCAATCCCTGCGTAATTGATCGAGAGAAAGCGTCTGTGTAAATCCTTTATTTTCTTCTTCTTCATTTGCATGATTTTTGAGAGGGTTAGATATAATATTAAATTTGTGTTGGACCATCAGTTTTAGCTTTTGGGTTCAATCGGTAATTTAAGAGAGAAAGCAAACAAATTAATTGGGATGACTCAGTCGTTGTATTTCAGTGTAATTCAGAGTATGCTTGGTATCGAAAATTTGACAATAGGGAAAATTGTATCTGAATTATGAGAAGAAATAGTAAGTTTTGCCGTTGAGCTTGAACCATTTGAATATTGGTTGCAGTTTCGAGATAATGCAATATGGCAACTTCAATGAGGTTGTTATCCACCTATCCAAGAACTAGTAAGCTTCAATCTCCAAATTATCAAAGAACAAGAGTTTCAGTTCCGGGCCTCGTAGCATGCTTTCACCTTCACCATCAATGCTGTTCCTTCTATGTGACCAAACCTTCAGTGCTGAAGAACTTCAAGTAAGTCATACCATGATGGTGGACATTCTATTATTTACTTAAGTTACTTATAGTTGGTAGGGTCTATGTTAGTTATGCTATTCTTGCATGGCGTTAGGATTTATTCCCCTGAATGTCAATTTGTTAAAGAAATGAAAATTATTCAGTCAGTCAAGCAGCTACTTGTTTTTGTTCTTTTTCTGCCCTCTCTCAAACGTTGTGCCATACAACTTGTACTCTATAGTTTCCAAACTTGGTAGAAGAGTTCAAGTTCATAATTTCGTAGCGAAGGGTATAATAAAATTGTCCTTTGGCCCTTCCCTTGGTAACACAAGGGAAATAATGATTGTATATCTCAAGGTGAAACAATGATATGCCATTCATGAAAGACAACAGGATGGCATGATGTCAAACAAAAATTCTCATAATTTCGCTAGCCTTCAGAGTGTAAAAGCGATGATAGAGGAGTTCCCCCTTCATCCGCTCTTAAGAGACAAAGGGGGTATTTTTGTGGCTTGCTAGGGTGTATGTTGTTATTTGGGACATTTGGAGTGAGGAACGATTGAGTCTATCAAGATAGGGAGCAGGAGCATAGTAAGATTTGGTTTTTGGCTAGATTTCACGTATCCATTTGGACTTCAATTTCGAAGAACTTCTTTAATTATTCCATTGATAACACTTTACTTAATTGGTCCCCCTCCTTTTAGTAGGGGTGTTTTGGTGGATTAGTTTTTTTTTATGCCCTTGTATTCTATCATTTTTTTTCTCGATGAAAGTAGTCGATTTCATTAAAGAAAGCCATACTTAACAATACTTGGAAAAAGTCATTACTGTACATTTAGTCCAACATATTTGTAATTTGTTATTATTCTTTTTGGTACAGGAAGATGGCCTTGTCCATTAGGGGGAGTGTGGAAGGGAGTCCATTTGATCCTCCTTCGAGTAACTCTAATGGCAGAACGAGACTGATACGGATTATTCAAGCTATTCAAACCAAGTTGAATGCGAGAATCAACGAGCTAAGAAAAAATCTTCCATTCAAAATACTCTTCTTCTTGGTTGGGTTTTACAGTGCAACTGCATTTGCAACTGTTATTGGCCAAACAGGTGATTGGGATATTCTATCTGCTGCATTGGCTGTTGTGGTTGTGGAAGGGATTGGGGCCCTCATGTATAGGGCTTCTCTTCCTCTTTTAAACAAAATTAAAGGCCTAATAACCATGTTCAATTATTGGAAGGCTGGACTTTCCATGGGTCTTTTCTTGGATTCTTTTAAATTTGAAATGGATGATATTTTTGGGATACATAACCTCTTCCATTTATACTTACATAATGTAATTCGTATAATTTATTAACACATTCAAATTTATGATTGTAAATCTTCAAATACTCCATTAACTTGGATTTATGTTTTTCCAAGCTTTGAGTACGTTTCATGGACCTGAATCCCTGGGACAAACATGGTCGCTGTTCAAAGGCTTTCCTAAGAACTATTTCTCAAGAAAGCTTTTGGATTCCCATTATCTACCTACTAGATGAATCTTCTGACTTATGAGTTGTAGGGTCTTTGGAAAATGTTAACACGATGTTTGCAGAAAAAC

mRNA sequence

TCTCTAAAAAAAAAAATAATAGAAAGACCATAAAATTTATTGGCTAGAAAGATGGAGAAGGATTGTCTATCCGATGTTGAAGGTACGACGCCAAAAAATTGCCCCCAGACTAAGACCGCCGATTGCTGGAAGAGACGAACACTTCTTGCAGCTAAACCTCTATGGGAGTAGCGTCAAAGATACTCTGAGAGCTTGCTTGGCCTCCCATGTTGATCATTTCGAGATAATGCAATATGGCAACTTCAATGAGGTTGTTATCCACCTATCCAAGAACTAGTAAGCTTCAATCTCCAAATTATCAAAGAACAAGAGTTTCAGTTCCGGGCCTCGTAGCATGCTTTCACCTTCACCATCAATGCTGTTCCTTCTATGTGACCAAACCTTCAGTGCTGAAGAACTTCAAGAAGATGGCCTTGTCCATTAGGGGGAGTGTGGAAGGGAGTCCATTTGATCCTCCTTCGAGTAACTCTAATGGCAGAACGAGACTGATACGGATTATTCAAGCTATTCAAACCAAGTTGAATGCGAGAATCAACGAGCTAAGAAAAAATCTTCCATTCAAAATACTCTTCTTCTTGGTTGGGTTTTACAGTGCAACTGCATTTGCAACTGTTATTGGCCAAACAGGTGATTGGGATATTCTATCTGCTGCATTGGCTGTTGTGGTTGTGGAAGGGATTGGGGCCCTCATGTATAGGGCTTCTCTTCCTCTTTTAAACAAAATTAAAGGCCTAATAACCATGTTCAATTATTGGAAGGCTGGACTTTCCATGGGTCTTTTCTTGGATTCTTTTAAATTTGAAATGGATGATATTTTTGGGATACATAACCTCTTCCATTTATACTTACATAATGTAATTCGTATAATTTATTAACACATTCAAATTTATGATTGTAAATCTTCAAATACTCCATTAACTTGGATTTATGTTTTTCCAAGCTTTGAGTACGTTTCATGGACCTGAATCCCTGGGACAAACATGGTCGCTGTTCAAAGGCTTTCCTAAGAACTATTTCTCAAGAAAGCTTTTGGATTCCCATTATCTACCTACTAGATGAATCTTCTGACTTATGAGTTGTAGGGTCTTTGGAAAATGTTAACACGATGTTTGCAGAAAAAC

Coding sequence (CDS)

ATGGCAACTTCAATGAGGTTGTTATCCACCTATCCAAGAACTAGTAAGCTTCAATCTCCAAATTATCAAAGAACAAGAGTTTCAGTTCCGGGCCTCGTAGCATGCTTTCACCTTCACCATCAATGCTGTTCCTTCTATGTGACCAAACCTTCAGTGCTGAAGAACTTCAAGAAGATGGCCTTGTCCATTAGGGGGAGTGTGGAAGGGAGTCCATTTGATCCTCCTTCGAGTAACTCTAATGGCAGAACGAGACTGATACGGATTATTCAAGCTATTCAAACCAAGTTGAATGCGAGAATCAACGAGCTAAGAAAAAATCTTCCATTCAAAATACTCTTCTTCTTGGTTGGGTTTTACAGTGCAACTGCATTTGCAACTGTTATTGGCCAAACAGGTGATTGGGATATTCTATCTGCTGCATTGGCTGTTGTGGTTGTGGAAGGGATTGGGGCCCTCATGTATAGGGCTTCTCTTCCTCTTTTAAACAAAATTAAAGGCCTAATAACCATGTTCAATTATTGGAAGGCTGGACTTTCCATGGGTCTTTTCTTGGATTCTTTTAAATTTGAAATGGATGATATTTTTGGGATACATAACCTCTTCCATTTATACTTACATAATGTAATTCGTATAATTTATTAA

Protein sequence

MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFHLHHQCCSFYVTKPSVLKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY

Homology

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BLAST of MELO3C022491.1 vs. ExPASy Swiss-Prot
Match: O80813 (Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-23
Identity = 66/172 (38.37%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 32  LVACFHLHHQCCSFYVTK-PSVLKNFK--------KMALSIRGSVEGSPFDPPSSNSN-- 91
           ++  FH   +  S  +T  P  +K+F+          AL    S+ G   +    N +  
Sbjct: 23  MINVFHRRIKASSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRT 82

Query: 92  --GRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILS 151
             G TRL RI  A   +L  +IN  RKN P KI   L+GFY+A A AT++GQTGDWD+L 
Sbjct: 83  GLGSTRLGRIAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLV 142

Query: 152 AALAVVVVEGIGALMYR--ASLPLLNKIKGLITMFNYWKAGLSMGLFLDSFK 189
           A + V  +EGIG LMY+  +S     K++  +   N+WKAG+ +GLF+D+FK
Sbjct: 143 AGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFK 194

[Close]

BLAST of MELO3C022491.1 vs. ExPASy Swiss-Prot
Match: Q9MUL5 (Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 83  TRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILSAALA 142
           TRL      I   L+++I     N P KIL  L+GF+ AT  ATV GQTGDWD+L A + 
Sbjct: 4   TRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVAGIL 63

Query: 143 VVVVEGIGALMYRASLPLLNKIKGL----ITMFNYWKAGLSMGLFLDSFK 189
           V ++E +G  MY        ++  +    +   NY K GL  GLF+D+FK
Sbjct: 64  VAMIEILGNKMYSKKYISKKQVFDISFLSLIGINYIKIGLIFGLFVDAFK 113

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BLAST of MELO3C022491.1 vs. ExPASy Swiss-Prot
Match: Q1XDS2 (Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.4e-09
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 82  RTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILSAAL 141
           +TRL      +   LN ++      L   ++  L+GF+ +T  +T+ GQTGDW I++A+L
Sbjct: 3   KTRLSTFFAYLIKNLNNKLYYSLSELTTGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 142 AVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSMGLFLDSFK 189
            V   E    ++Y +   L  K    I +FN +K G++ GLF+D+FK
Sbjct: 63  IVAATELTSKIVYSSHKQLNIK----INLFNNFKIGITYGLFVDAFK 105

[Close]

BLAST of MELO3C022491.1 vs. ExPASy Swiss-Prot
Match: P51214 (Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-08
Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = 0


Query: 89  IQAIQTKLNARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEG 148
           +Q + ++L   +NEL   L    +  L+GF+ +T  +T+ GQTGDW I++A+L V  +E 
Sbjct: 14  VQNLSSRLYYSLNELTAGL----ISLLLGFFISTGLSTIPGQTGDWGIIAASLIVAAIEL 73

Query: 149 IGALMYRASLPLLNKIKGLITMFNYWKAGLSMGLFLDSFK 189
           +  ++Y        K    I + N  K G++ GLF+D+FK
Sbjct: 74  VSKIVYSNK----KKYGVRINLLNNLKIGITYGLFVDAFK 105

[Close]

BLAST of MELO3C022491.1 vs. ExPASy Swiss-Prot
Match: P72983 (Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1509 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 33/107 (30.84%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 82  RTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILSAAL 141
           RTRL  I++    +L+       + +   +L FL GF+  TA AT  GQ   WD++ AA 
Sbjct: 3   RTRLNTIVEVRGQQLSQFFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAF 62

Query: 142 AVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSMGLFLDSFK 189
            ++  E +    YR  + + +    ++ +F   K G+S  LFL++FK
Sbjct: 63  ILLFCELVNRWFYRRGVKMGDLQAEVLNIF---KMGVSYSLFLEAFK 106

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BLAST of MELO3C022491.1 vs. NCBI nr
Match: XP_008460100.1 (PREDICTED: ycf20-like protein [Cucumis melo] >XP_008460101.1 PREDICTED: ycf20-like protein [Cucumis melo] >XP_016902474.1 PREDICTED: ycf20-like protein [Cucumis melo])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFHLHHQCCSFYVTKPSVLKNFKKMA 60
           MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFHLHHQCCSFYVTKPSVLKNFKKMA
Sbjct: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFHLHHQCCSFYVTKPSVLKNFKKMA 60

Query: 61  LSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYS 120
           LSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYS
Sbjct: 61  LSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYS 120

Query: 121 ATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSM 180
           ATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSM
Sbjct: 121 ATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSM 180

Query: 181 GLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           GLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY
Sbjct: 181 GLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 213

[Close]

BLAST of MELO3C022491.1 vs. NCBI nr
Match: XP_004145006.1 (ycf20-like protein [Cucumis sativus])

HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107
Identity = 207/221 (93.67%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACF--------HLHHQCCSFYVTKPSV 60
           MATSMRLLSTYPRTSKLQSPNY RTRVSVPGLVACF        HLHHQCCSFYVTKPSV
Sbjct: 1   MATSMRLLSTYPRTSKLQSPNYPRTRVSVPGLVACFYDTYVLHGHLHHQCCSFYVTKPSV 60

Query: 61  LKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKIL 120
           LKNFKKMALSIRGSVEG+PFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLP KIL
Sbjct: 61  LKNFKKMALSIRGSVEGNPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPLKIL 120

Query: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180
           FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIK LITMFN
Sbjct: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKDLITMFN 180

Query: 181 YWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           YWKAGLSMGLFLDSFKFEMDDIFG+HNLFHLYLHNVI IIY
Sbjct: 181 YWKAGLSMGLFLDSFKFEMDDIFGLHNLFHLYLHNVIPIIY 221

[Close]

BLAST of MELO3C022491.1 vs. NCBI nr
Match: KGN46257.2 (hypothetical protein Csa_004976 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 1.0e-105
Identity = 202/215 (93.95%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACF--------HLHHQCCSFYVTKPSV 60
           MATSMRLLSTYPRTSKLQSPNY RTRVSVPGLVACF        HLHHQCCSFYVTKPSV
Sbjct: 1   MATSMRLLSTYPRTSKLQSPNYPRTRVSVPGLVACFYDTYVLHGHLHHQCCSFYVTKPSV 60

Query: 61  LKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKIL 120
           LKNFKKMALSIRGSVEG+PFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLP KIL
Sbjct: 61  LKNFKKMALSIRGSVEGNPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPLKIL 120

Query: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180
           FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIK LITMFN
Sbjct: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKDLITMFN 180

Query: 181 YWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHN 208
           YWKAGLSMGLFLDSFKFEMDDIFG+HNLFHLYLHN
Sbjct: 181 YWKAGLSMGLFLDSFKFEMDDIFGLHNLFHLYLHN 215

[Close]

BLAST of MELO3C022491.1 vs. NCBI nr
Match: XP_038875296.1 (ycf20-like protein isoform X2 [Benincasa hispida])

HSP 1 Score: 379.0 bits (972), Expect = 2.6e-101
Identity = 198/221 (89.59%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFH--------LHHQCCSFYVTKPSV 60
           MA S RLLSTYPRTSKLQSPNY +TR SV GLVACF+        LHHQ CS YVTKPSV
Sbjct: 1   MAISTRLLSTYPRTSKLQSPNYAKTRGSVSGLVACFYDTYVLHGQLHHQYCSCYVTKPSV 60

Query: 61  LKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKIL 120
           LKNFKKMALSIRGSVEGSPFDPPS+NSNGRTRLIRIIQAIQTKLNARINELRKNLP KIL
Sbjct: 61  LKNFKKMALSIRGSVEGSPFDPPSNNSNGRTRLIRIIQAIQTKLNARINELRKNLPLKIL 120

Query: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180
           FFLVGFYSATAFATVIGQTGDWD+LSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN
Sbjct: 121 FFLVGFYSATAFATVIGQTGDWDVLSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180

Query: 181 YWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           YWKAGLSMGLFLDSFKFEMDDIFG+HNLFHLYL NVI IIY
Sbjct: 181 YWKAGLSMGLFLDSFKFEMDDIFGLHNLFHLYLENVIHIIY 221

[Close]

BLAST of MELO3C022491.1 vs. NCBI nr
Match: XP_038875295.1 (uncharacterized protein LOC120067784 isoform X1 [Benincasa hispida])

HSP 1 Score: 379.0 bits (972), Expect = 2.6e-101
Identity = 198/221 (89.59%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFH--------LHHQCCSFYVTKPSV 60
           MA S RLLSTYPRTSKLQSPNY +TR SV GLVACF+        LHHQ CS YVTKPSV
Sbjct: 41  MAISTRLLSTYPRTSKLQSPNYAKTRGSVSGLVACFYDTYVLHGQLHHQYCSCYVTKPSV 100

Query: 61  LKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKIL 120
           LKNFKKMALSIRGSVEGSPFDPPS+NSNGRTRLIRIIQAIQTKLNARINELRKNLP KIL
Sbjct: 101 LKNFKKMALSIRGSVEGSPFDPPSNNSNGRTRLIRIIQAIQTKLNARINELRKNLPLKIL 160

Query: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180
           FFLVGFYSATAFATVIGQTGDWD+LSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN
Sbjct: 161 FFLVGFYSATAFATVIGQTGDWDVLSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 220

Query: 181 YWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           YWKAGLSMGLFLDSFKFEMDDIFG+HNLFHLYL NVI IIY
Sbjct: 221 YWKAGLSMGLFLDSFKFEMDDIFGLHNLFHLYLENVIHIIY 261

[Close]

BLAST of MELO3C022491.1 vs. ExPASy TrEMBL
Match: A0A1S3CBS0 (ycf20-like protein OS=Cucumis melo OX=3656 GN=LOC103499014 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.6e-114
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFHLHHQCCSFYVTKPSVLKNFKKMA 60
           MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFHLHHQCCSFYVTKPSVLKNFKKMA
Sbjct: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFHLHHQCCSFYVTKPSVLKNFKKMA 60

Query: 61  LSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYS 120
           LSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYS
Sbjct: 61  LSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYS 120

Query: 121 ATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSM 180
           ATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSM
Sbjct: 121 ATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSM 180

Query: 181 GLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           GLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY
Sbjct: 181 GLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 213

[Close]

BLAST of MELO3C022491.1 vs. ExPASy TrEMBL
Match: A0A0A0K9U0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077990 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.4e-108
Identity = 207/221 (93.67%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACF--------HLHHQCCSFYVTKPSV 60
           MATSMRLLSTYPRTSKLQSPNY RTRVSVPGLVACF        HLHHQCCSFYVTKPSV
Sbjct: 1   MATSMRLLSTYPRTSKLQSPNYPRTRVSVPGLVACFYDTYVLHGHLHHQCCSFYVTKPSV 60

Query: 61  LKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKIL 120
           LKNFKKMALSIRGSVEG+PFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLP KIL
Sbjct: 61  LKNFKKMALSIRGSVEGNPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPLKIL 120

Query: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180
           FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIK LITMFN
Sbjct: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKDLITMFN 180

Query: 181 YWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           YWKAGLSMGLFLDSFKFEMDDIFG+HNLFHLYLHNVI IIY
Sbjct: 181 YWKAGLSMGLFLDSFKFEMDDIFGLHNLFHLYLHNVIPIIY 221

[Close]

BLAST of MELO3C022491.1 vs. ExPASy TrEMBL
Match: A0A6J1H7K4 (uncharacterized protein LOC111460299 OS=Cucurbita moschata OX=3662 GN=LOC111460299 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.6e-98
Identity = 191/221 (86.43%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFH--------LHHQCCSFYVTKPSV 60
           MA  MRLLSTYPRTSKLQSP Y +TRVSVPGL ACF+        LHHQ  SFYVTKPSV
Sbjct: 1   MAFPMRLLSTYPRTSKLQSPKYAKTRVSVPGLAACFYNTYVLHGQLHHQSLSFYVTKPSV 60

Query: 61  LKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKIL 120
           LKNFKKMALSIR SVE SPFDPPS++SNGRTRL RII AIQTKLNARINELRKNLP KIL
Sbjct: 61  LKNFKKMALSIRSSVEESPFDPPSNSSNGRTRLTRIISAIQTKLNARINELRKNLPLKIL 120

Query: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180
           FFLVGFYSATAFATVIGQTGDWD+LSAALAV VVEGIGALMYRASLPLLNKIKGLITMFN
Sbjct: 121 FFLVGFYSATAFATVIGQTGDWDVLSAALAVAVVEGIGALMYRASLPLLNKIKGLITMFN 180

Query: 181 YWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           YWKAGLSMGLFLDSFK+EMDDIFG+HNLFHLYL NVI IIY
Sbjct: 181 YWKAGLSMGLFLDSFKYEMDDIFGLHNLFHLYLENVIHIIY 221

[Close]

BLAST of MELO3C022491.1 vs. ExPASy TrEMBL
Match: A0A6J1L1A0 (uncharacterized protein LOC111498957 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498957 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 189/221 (85.52%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFH--------LHHQCCSFYVTKPSV 60
           MA  MRLLS YPRTSKLQSP Y +TRVSVPGL ACF+        LHH   SFYVTKPSV
Sbjct: 1   MAFPMRLLSPYPRTSKLQSPKYAKTRVSVPGLAACFYNTYVLHGQLHHHSFSFYVTKPSV 60

Query: 61  LKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKIL 120
           LKNFKKMALSIR SVE SPFDPPS++SNGRTRL RII AIQTKLNARINELRKNLP KIL
Sbjct: 61  LKNFKKMALSIRSSVEESPFDPPSNSSNGRTRLTRIISAIQTKLNARINELRKNLPLKIL 120

Query: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180
           FFLVGFYSATAFATVIGQTGDWD+LSAALAV VVEGIGALMYRASLPLLNKIKGLITMFN
Sbjct: 121 FFLVGFYSATAFATVIGQTGDWDVLSAALAVAVVEGIGALMYRASLPLLNKIKGLITMFN 180

Query: 181 YWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           YWKAGLSMGLFLDSFK+EMDDIFG+HNLFHLYL NVI IIY
Sbjct: 181 YWKAGLSMGLFLDSFKYEMDDIFGLHNLFHLYLENVIHIIY 221

[Close]

BLAST of MELO3C022491.1 vs. ExPASy TrEMBL
Match: A0A6J1DQ25 (ycf20-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022766 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.4e-87
Identity = 176/221 (79.64%), Postives = 188/221 (85.07%), Query Frame = 0


Query: 1   MATSMRLLSTYPRTSKLQSPNYQRTRVSVPGLVACFH--------LHHQCCSFYVTKPSV 60
           M T MR LSTYPRT  LQSP    +R+SVPGL  CF+         HHQC SF V KPSV
Sbjct: 1   METPMR-LSTYPRTIMLQSPKGVTSRLSVPGLAECFYDTHVFCGKHHHQCYSFSVAKPSV 60

Query: 61  LKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKIL 120
           LKNFKKMALSIR SVEGSPFDPP ++SNG TRLIRIIQAIQTKL+A+INELRKNLP KI 
Sbjct: 61  LKNFKKMALSIRSSVEGSPFDPPPNSSNGGTRLIRIIQAIQTKLDAKINELRKNLPLKIF 120

Query: 121 FFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180
           FFLVGFYSATAFATVIGQTGDWD+LSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN
Sbjct: 121 FFLVGFYSATAFATVIGQTGDWDVLSAALAVVVVEGIGALMYRASLPLLNKIKGLITMFN 180

Query: 181 YWKAGLSMGLFLDSFKFEMDDIFGIHNLFHLYLHNVIRIIY 214
           YWKAGLSMGLFLDSFK+EMDDIFG+HN F L+L NV+ I Y
Sbjct: 181 YWKAGLSMGLFLDSFKYEMDDIFGLHNFFPLFLENVLHIFY 220

[Close]

BLAST of MELO3C022491.1 vs. TAIR 10
Match: AT3G56830.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-42
Identity = 87/155 (56.13%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 42  CCSFYVTKPSVLKNFKKMA-LSIRGSVEGSPFDP----PSSNSNGRTRLIRIIQAIQTKL 101
           C   +  +P ++++ ++M+  +I+ SV G  FDP     S+NS+   RLI+ IQ +++KL
Sbjct: 36  CHFLHPAQPLLVRHQRRMSWTTIKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKL 95

Query: 102 NARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRA 161
             +I E++K+LP K+ F LVGFYSATAF+T IGQTGDWD+LSA LAV+VVE IGALMYRA
Sbjct: 96  LVKIQEIKKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRA 155

Query: 162 SLPLLNKIKGLITMFNYWKAGLSMGLFLDSFKFEM 192
           S+PL+NK++  ITMFNYWK GL++GLFLDSFK+E+
Sbjct: 156 SIPLINKMRSTITMFNYWKTGLALGLFLDSFKYEV 190

[Close]

BLAST of MELO3C022491.1 vs. TAIR 10
Match: AT3G56830.2 (Protein of unknown function (DUF565) )

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42
Identity = 87/153 (56.86%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 42  CCSFYVTKPSVLKNFKKMA-LSIRGSVEGSPFDP----PSSNSNGRTRLIRIIQAIQTKL 101
           C   +  +P ++++ ++M+  +I+ SV G  FDP     S+NS+   RLI+ IQ +++KL
Sbjct: 36  CHFLHPAQPLLVRHQRRMSWTTIKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKL 95

Query: 102 NARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRA 161
             +I E++K+LP K+ F LVGFYSATAF+T IGQTGDWD+LSA LAV+VVE IGALMYRA
Sbjct: 96  LVKIQEIKKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRA 155

Query: 162 SLPLLNKIKGLITMFNYWKAGLSMGLFLDSFKF 190
           S+PL+NK++  ITMFNYWK GL++GLFLDSFKF
Sbjct: 156 SIPLINKMRSTITMFNYWKTGLALGLFLDSFKF 188

[Close]

BLAST of MELO3C022491.1 vs. TAIR 10
Match: AT3G56830.3 (Protein of unknown function (DUF565) )

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42
Identity = 87/153 (56.86%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 42  CCSFYVTKPSVLKNFKKMA-LSIRGSVEGSPFDP----PSSNSNGRTRLIRIIQAIQTKL 101
           C   +  +P ++++ ++M+  +I+ SV G  FDP     S+NS+   RLI+ IQ +++KL
Sbjct: 36  CHFLHPAQPLLVRHQRRMSWTTIKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKL 95

Query: 102 NARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRA 161
             +I E++K+LP K+ F LVGFYSATAF+T IGQTGDWD+LSA LAV+VVE IGALMYRA
Sbjct: 96  LVKIQEIKKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRA 155

Query: 162 SLPLLNKIKGLITMFNYWKAGLSMGLFLDSFKF 190
           S+PL+NK++  ITMFNYWK GL++GLFLDSFKF
Sbjct: 156 SIPLINKMRSTITMFNYWKTGLALGLFLDSFKF 188

[Close]

BLAST of MELO3C022491.1 vs. TAIR 10
Match: AT1G65420.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 111.7 bits (278), Expect = 7.3e-25
Identity = 66/172 (38.37%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 32  LVACFHLHHQCCSFYVTK-PSVLKNFK--------KMALSIRGSVEGSPFDPPSSNSN-- 91
           ++  FH   +  S  +T  P  +K+F+          AL    S+ G   +    N +  
Sbjct: 23  MINVFHRRIKASSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRT 82

Query: 92  --GRTRLIRIIQAIQTKLNARINELRKNLPFKILFFLVGFYSATAFATVIGQTGDWDILS 151
             G TRL RI  A   +L  +IN  RKN P KI   L+GFY+A A AT++GQTGDWD+L 
Sbjct: 83  GLGSTRLGRIAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLV 142

Query: 152 AALAVVVVEGIGALMYR--ASLPLLNKIKGLITMFNYWKAGLSMGLFLDSFK 189
           A + V  +EGIG LMY+  +S     K++  +   N+WKAG+ +GLF+D+FK
Sbjct: 143 AGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFK 194

The following BLAST results are available for this feature:

BLAST of MELO3C022491.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80813	1.0e-23	38.37	Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2	[more]
Q9MUL5	1.4e-12	40.00	Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1	[more]
Q1XDS2	9.4e-09	33.64	Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1	[more]
P51214	3.6e-08	34.00	Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1	[more]
P72983	2.0e-06	30.84	Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]

BLAST of MELO3C022491.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460100.1	1.8e-113	100.00	PREDICTED: ycf20-like protein [Cucumis melo] >XP_008460101.1 PREDICTED: ycf20-li...	[more]
XP_004145006.1	1.1e-107	93.67	ycf20-like protein [Cucumis sativus]	[more]
KGN46257.2	1.0e-105	93.95	hypothetical protein Csa_004976 [Cucumis sativus]	[more]
XP_038875296.1	2.6e-101	89.59	ycf20-like protein isoform X2 [Benincasa hispida]	[more]
XP_038875295.1	2.6e-101	89.59	uncharacterized protein LOC120067784 isoform X1 [Benincasa hispida]	[more]

BLAST of MELO3C022491.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBS0	8.6e-114	100.00	ycf20-like protein OS=Cucumis melo OX=3656 GN=LOC103499014 PE=3 SV=1	[more]
A0A0A0K9U0	5.4e-108	93.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077990 PE=3 SV=1	[more]
A0A6J1H7K4	6.6e-98	86.43	uncharacterized protein LOC111460299 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A6J1L1A0	1.6e-96	85.52	uncharacterized protein LOC111498957 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DQ25	1.4e-87	79.64	ycf20-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022766 PE=...	[more]

BLAST of MELO3C022491.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56830.1	1.3e-42	56.13	Protein of unknown function (DUF565)	[more]
AT3G56830.2	3.9e-42	56.86	Protein of unknown function (DUF565)	[more]
AT3G56830.3	3.9e-42	56.86	Protein of unknown function (DUF565)	[more]
AT1G65420.1	7.3e-25	38.37	Protein of unknown function (DUF565)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007572	Uncharacterised protein family Ycf20	PFAM	PF04483	DUF565	coord: 130..188 e-value: 1.1E-16 score: 61.0
IPR007572	Uncharacterised protein family Ycf20	PANTHER	PTHR33787	FAMILY NOT NAMED	coord: 4..198
None	No IPR available	PANTHER	PTHR33787:SF3	YCF20-LIKE PROTEIN	coord: 4..198

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C022491	MELO3C022491	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022491.1:exon:339090	MELO3C022491.1:exon:339090	exon
MELO3C022491.1:exon:339091	MELO3C022491.1:exon:339091	exon
MELO3C022491.1:exon:339092	MELO3C022491.1:exon:339092	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022491.1:five_prime_utr	MELO3C022491.1:five_prime_utr	five_prime_UTR
MELO3C022491.1:five_prime_utr	MELO3C022491.1:five_prime_utr_2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022491.1:cds	MELO3C022491.1:cds	CDS
MELO3C022491.1:cds	MELO3C022491.1:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C022491.1:three_prime_utr	MELO3C022491.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C022491.1	MELO3C022491.1-protein	polypeptide