Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GCAGAAACCAAGCATAGGAGTTAGGCTCTTCACAATTTCTCTCACGGCTGAATCACTCGAAAATAAGGAAGTTCTTCTACACTCATCAATTGTACATCTTCTTCGTCGTCTTCTTAGCCCTACACGTCGGCGATTTCGTCTTCACCATTGCCGCCGGTGGAATCTTCATATTCATGCTCGACCGCTTCCTCCGATTCATTCAATCAAGAACCACCGTGGATGTAATTTCGGCCAAGGCGCTTCCCTGCGGCACCGTCGAATTGGTCCTCTCCAAACCTAA mRNA sequence GCAGAAACCAAGCATAGGAGTTAGGCTCTTCACAATTTCTCTCACGGCTGAATCACTCGAAAATAAGGAAGTTCTTCTACACTCATCAATTGTACATCTTCTTCGTCGTCTTCTTAGCCCTACACGTCGGCGATTTCGTCTTCACCATTGCCGCCGGTGGAATCTTCATATTCATGCTCGACCGCTTCCTCCGATTCATTCAATCAAGAACCACCGTGGATGTAATTTCGGCCAAGGCGCTTCCCTGCGGCACCGTCGAATTGGTCCTCTCCAAACCTAA Coding sequence (CDS) CAGAAACCAAGCATAGGAGTTAGGCTCTTCACAATTTCTCTCACGGCTGAATCACTCGAAAATAAGGAAGTTCTTCTACACTCATCAATTGTACATCTTCTTCGTCGTCTTCTTAGCCCTACACGTCGGCGATTTCGTCTTCACCATTGCCGCCGGTGGAATCTTCATATTCATGCTCGACCGCTTCCTCCGATTCATTCAATCAAGAACCACCGTGGATGTAATTTCGGCCAAGGCGCTTCCCTGCGGCACCGTCGAATTGGTCCTCTCCAAACCTAA Protein sequence QKPSIGVRLFTISLTAESLENKEVLLHSSIVHLLRRLLSPTRRRFRLHHCRRWNLHIHARPLPPIHSIKNHRGCNFGQGASLRHRRIGPLQT
Homology
BLAST of MELO3C020385.1 vs. NCBI nr
Match: KAA0033184.1 (ferric reduction oxidase 7 [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 2.1e-15 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0
Query: 6 GVRLFTISLTAESLENKEVLLHSSIVHLLRRL-LSPTRRRFRLHHCRRWNLHIHARPLPP 65
G+ ++ SL +N E+ ++ ++++ + L+P F RWNLHIHARPLPP
Sbjct: 20 GLLMWITSLPKLRTKNFELFFYTHQLYIIFVVFLAPHVGDFVFTIAARWNLHIHARPLPP 79
Query: 66 IHSIKNHRGCNFGQGASLRHRRIGPLQT 93
IHSIKNHRGCNF QGASLRHRRIGPLQT
Sbjct: 80 IHSIKNHRGCNFDQGASLRHRRIGPLQT 107
BLAST of MELO3C020385.1 vs. ExPASy TrEMBL
Match: A0A5A7SPN9 (Ferric reduction oxidase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1276G00280 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.0e-15 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0
Query: 6 GVRLFTISLTAESLENKEVLLHSSIVHLLRRL-LSPTRRRFRLHHCRRWNLHIHARPLPP 65
G+ ++ SL +N E+ ++ ++++ + L+P F RWNLHIHARPLPP
Sbjct: 20 GLLMWITSLPKLRTKNFELFFYTHQLYIIFVVFLAPHVGDFVFTIAARWNLHIHARPLPP 79
Query: 66 IHSIKNHRGCNFGQGASLRHRRIGPLQT 93
IHSIKNHRGCNF QGASLRHRRIGPLQT
Sbjct: 80 IHSIKNHRGCNFDQGASLRHRRIGPLQT 107
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0033184.1 | 2.1e-15 | 54.55 | ferric reduction oxidase 7 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SPN9 | 1.0e-15 | 54.55 | Ferric reduction oxidase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C020385.1:exon:357704 | MELO3C020385.1:exon:357704 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C020385.1:cds | MELO3C020385.1:cds | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C020385.1:five_prime_utr | MELO3C020385.1:five_prime_utr | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C020385.1 | MELO3C020385.1-protein | polypeptide |
|
