MELO3C020047.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C020047.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr10: 10643619 .. 10643849 (+)
Sequence length231
RNA-Seq ExpressionMELO3C020047.1
SyntenyMELO3C020047.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATGGTGGTGTTAGGCACGAAAAGCAGAAGACAACGAAAGTCCAGCGACATGAAGCACGCGCTTGTGCTATGCAGCTTGCCTCAAGCACGAAGAGAAGCAACGCACAAGGCACGCACGACCAAGAGAGCACGCGACAAGCCCTATGCGTGAGGAGGGCCATGCGAGATGCAAGGCATGTGTGGCCAAGTGAGGTGCATGCGGCGTGCTCTTACGAGGTTAGCACGCAGTAA

mRNA sequence

CATGGTGGTGTTAGGCACGAAAAGCAGAAGACAACGAAAGTCCAGCGACATGAAGCACGCGCTTGTGCTATGCAGCTTGCCTCAAGCACGAAGAGAAGCAACGCACAAGGCACGCACGACCAAGAGAGCACGCGACAAGCCCTATGCGTGAGGAGGGCCATGCGAGATGCAAGGCATGTGTGGCCAAGTGAGGTGCATGCGGCGTGCTCTTACGAGGTTAGCACGCAGTAA

Coding sequence (CDS)

ATGCAGCTTGCCTCAAGCACGAAGAGAAGCAACGCACAAGGCACGCACGACCAAGAGAGCACGCGACAAGCCCTATGCGTGAGGAGGGCCATGCGAGATGCAAGGCATGTGTGGCCAAGTGAGGTGCATGCGGCGTGCTCTTACGAGGTTAGCACGCAGTAA

Protein sequence

MQLASSTKRSNAQGTHDQESTRQALCVRRAMRDARHVWPSEVHAACSYEVSTQ
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C020047.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C020047.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C020047.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C020047.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C020047MELO3C020047gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C020047.1:exon:290929MELO3C020047.1:exon:290929exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C020047.1:five_prime_utrMELO3C020047.1:five_prime_utrfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C020047.1:cdsMELO3C020047.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C020047.1MELO3C020047.1-proteinpolypeptide