MELO3C017719.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C017719.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Myb-like protein J
Location	chr07: 24228751 .. 24229870 (-)
Sequence length	1026
RNA-Seq Expression	MELO3C017719.1
Synteny	MELO3C017719.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCCACGATGCAAGAAAATAAGAACAACTTGCTTTTTCTTCATTCTTCTTCAACTCCAACGTCTTTACATAATTTTGATCAAAATTCAGCACCAACGTTGACGTCGACTATAAATGATCATGAGATGTCGCGACAGTTGTTTTCTTCCATTGAATCAGGTGATTGGACAAATAATGAAGGGAATCATAATCACAAGCGTAACTTGAAAACTACACAATGTTACCCTTCTTCTTCCACCCCATTTATTGATGCCAATGATAACTTTGAAACTCCACGATACTATCATCCTTCCTCTTCTCAATCTGTTGATCCCAACTCTAACTATAGCAACATGGATGATGCTTTTCTTTTTTCTGATTCTTTGACATGTTCTCCTTCCATTCTTTCAACGACGCATAATAAAGACTCATTCAATGATTCTATTGGACATAATGGTTTTCTTTCCGACGTTGTCAATTCCAGCTCCACCAAAACATCATCGAAAAGCTTGGATTCCATGACATTTAACAATCGGCATTCTCCCTATCCTAATCCCCAAACATCACATTTTTACTCTCCTTCCTCTATTTCAACAACTCATAATAACGATCAATTTGCTGACTCCACTGAATATACTGGTTTGCTTTCTGACATCGTTAAAATGAGGCCACGTGTTCCAACAATGTCTTCGTCAACCACAAATTTGTCATCATTACCACCACGACCACCATCGTCGCACAACTCATTGAACATAAAAAATAACAACATCAGAAACTATTGGAGCTTAAAGGAGCACAGGTACGTATATAACACAAATATAATATATGCAACTCATCTTTCATTTGACTATCGATTGTATGAAGTTATTAACTATACATACATATTATTGCAGATTATTTCTGGCAGGGATGCAACTTTTAGGCAAAGCTGAATGGAAAAAAATTGCAGACCACGTGGTGATTACCAAAACACACAAGCAAGTGGCTAGTCATGCCCAGAAGTACTTTCTTCATCTAGATAAGTTATCGAAACATAAGCGTAAGAGATCGAGTATTCATGATATCACCACTGTCGAGCCTGAATTTTTGGCGGAGGTGGAAGCATGTTTACCGCAACACTTGAAGGGTCTCAATCAATGA

mRNA sequence

GTTTCCACGATGCAAGAAAATAAGAACAACTTGCTTTTTCTTCATTCTTCTTCAACTCCAACGTCTTTACATAATTTTGATCAAAATTCAGCACCAACGTTGACGTCGACTATAAATGATCATGAGATGTCGCGACAGTTGTTTTCTTCCATTGAATCAGGTGATTGGACAAATAATGAAGGGAATCATAATCACAAGCGTAACTTGAAAACTACACAATGTTACCCTTCTTCTTCCACCCCATTTATTGATGCCAATGATAACTTTGAAACTCCACGATACTATCATCCTTCCTCTTCTCAATCTGTTGATCCCAACTCTAACTATAGCAACATGGATGATGCTTTTCTTTTTTCTGATTCTTTGACATGTTCTCCTTCCATTCTTTCAACGACGCATAATAAAGACTCATTCAATGATTCTATTGGACATAATGGTTTTCTTTCCGACGTTGTCAATTCCAGCTCCACCAAAACATCATCGAAAAGCTTGGATTCCATGACATTTAACAATCGGCATTCTCCCTATCCTAATCCCCAAACATCACATTTTTACTCTCCTTCCTCTATTTCAACAACTCATAATAACGATCAATTTGCTGACTCCACTGAATATACTGGTTTGCTTTCTGACATCGTTAAAATGAGGCCACGTGTTCCAACAATGTCTTCGTCAACCACAAATTTGTCATCATTACCACCACGACCACCATCGTCGCACAACTCATTGAACATAAAAAATAACAACATCAGAAACTATTGGAGCTTAAAGGAGCACAGATTATTTCTGGCAGGGATGCAACTTTTAGGCAAAGCTGAATGGAAAAAAATTGCAGACCACGTGGTGATTACCAAAACACACAAGCAAGTGGCTAGTCATGCCCAGAAGTACTTTCTTCATCTAGATAAGTTATCGAAACATAAGCGTAAGAGATCGAGTATTCATGATATCACCACTGTCGAGCCTGAATTTTTGGCGGAGGTGGAAGCATGTTTACCGCAACACTTGAAGGGTCTCAATCAATGA

Coding sequence (CDS)

ATGCAAGAAAATAAGAACAACTTGCTTTTTCTTCATTCTTCTTCAACTCCAACGTCTTTACATAATTTTGATCAAAATTCAGCACCAACGTTGACGTCGACTATAAATGATCATGAGATGTCGCGACAGTTGTTTTCTTCCATTGAATCAGGTGATTGGACAAATAATGAAGGGAATCATAATCACAAGCGTAACTTGAAAACTACACAATGTTACCCTTCTTCTTCCACCCCATTTATTGATGCCAATGATAACTTTGAAACTCCACGATACTATCATCCTTCCTCTTCTCAATCTGTTGATCCCAACTCTAACTATAGCAACATGGATGATGCTTTTCTTTTTTCTGATTCTTTGACATGTTCTCCTTCCATTCTTTCAACGACGCATAATAAAGACTCATTCAATGATTCTATTGGACATAATGGTTTTCTTTCCGACGTTGTCAATTCCAGCTCCACCAAAACATCATCGAAAAGCTTGGATTCCATGACATTTAACAATCGGCATTCTCCCTATCCTAATCCCCAAACATCACATTTTTACTCTCCTTCCTCTATTTCAACAACTCATAATAACGATCAATTTGCTGACTCCACTGAATATACTGGTTTGCTTTCTGACATCGTTAAAATGAGGCCACGTGTTCCAACAATGTCTTCGTCAACCACAAATTTGTCATCATTACCACCACGACCACCATCGTCGCACAACTCATTGAACATAAAAAATAACAACATCAGAAACTATTGGAGCTTAAAGGAGCACAGATTATTTCTGGCAGGGATGCAACTTTTAGGCAAAGCTGAATGGAAAAAAATTGCAGACCACGTGGTGATTACCAAAACACACAAGCAAGTGGCTAGTCATGCCCAGAAGTACTTTCTTCATCTAGATAAGTTATCGAAACATAAGCGTAAGAGATCGAGTATTCATGATATCACCACTGTCGAGCCTGAATTTTTGGCGGAGGTGGAAGCATGTTTACCGCAACACTTGAAGGGTCTCAATCAATGA

Protein sequence

MQENKNNLLFLHSSSTPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ

Homology

[Close]

BLAST of MELO3C017719.1 vs. NCBI nr
Match: KAA0044592.1 (myb-like protein J [Cucumis melo var. makuwa])

HSP 1 Score: 664.1 bits (1712), Expect = 6.5e-187
Identity = 336/338 (99.41%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MQENKNNLLFLHSSSTPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNNEGNH 60
           MQENKNNLLFLHSSSTPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNNE NH
Sbjct: 1   MQENKNNLLFLHSSSTPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNNEENH 60

Query: 61  NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT 120
           NHKRNL+TTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT
Sbjct: 61  NHKRNLETTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT 120

Query: 121 CSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSH 180
           CSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSH
Sbjct: 121 CSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSH 180

Query: 181 FYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSL 240
           FYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSL
Sbjct: 181 FYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSL 240

Query: 241 NIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDK 300
           NIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDK
Sbjct: 241 NIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDK 300

Query: 301 LSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 339
           LSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ
Sbjct: 301 LSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 338

[Close]

BLAST of MELO3C017719.1 vs. NCBI nr
Match: XP_008454484.1 (PREDICTED: myb-like protein J [Cucumis melo])

HSP 1 Score: 594.3 bits (1531), Expect = 6.4e-166
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 40  MSRQLFSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQS 99
           MSRQLFSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQS
Sbjct: 1   MSRQLFSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQS 60

Query: 100 VDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSK 159
           VDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSK
Sbjct: 61  VDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSK 120

Query: 160 SLDSMTFNNRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTM 219
           SLDSMTFNNRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTM
Sbjct: 121 SLDSMTFNNRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTM 180

Query: 220 SSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVV 279
           SSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVV
Sbjct: 181 SSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVV 240

Query: 280 ITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 339
           ITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ
Sbjct: 241 ITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 299

[Close]

BLAST of MELO3C017719.1 vs. NCBI nr
Match: XP_011654326.2 (myb-like protein J [Cucumis sativus] >KAE8649106.1 hypothetical protein Csa_015417 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 9.1e-80
Identity = 206/370 (55.68%), Postives = 243/370 (65.68%), Query Frame = 0


Query: 1   MQENKNNLLFLHSSS----TPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNN 60
           M ENK N+ F HSS     TPTS +NFDQNS     S  ++HEMS  L     S +W NN
Sbjct: 1   MAENK-NVSFPHSSGSSLHTPTSPYNFDQNSVALSPSIDDNHEMSLGL--EFSSCNWINN 60

Query: 61  EG---------------NH-----NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSS 120
            G               NH     N   N +TTQ YP S   F   NDNFETP++YHP+ 
Sbjct: 61  VGSEQLPTMEETSLRRVNHSLSLTNPNGNFETTQYYP-SFPQFNVLNDNFETPQFYHPAY 120

Query: 121 SQSVDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGH-NGFLSDVVNSSSTK 180
           +Q  DPN+NY+NM DAFL      CSPS LSTTHN  S NDSI + NGFLSDVVNS+STK
Sbjct: 121 TQFNDPNNNYNNMGDAFL------CSPSTLSTTHN--SSNDSIRYNNGFLSDVVNSNSTK 180

Query: 181 TSSKSLDSMTFN---NRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--V 240
           T+    +  +F+   N  S + +PQTSHF SPS+ S THNN QFADST YTGLLSDI   
Sbjct: 181 TTMTFENGCSFDSNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQ 240

Query: 241 KMRPRVPTMSSSTTNL---SSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLG 300
            +RP VPT+S STTNL   SSLPP+P  S NSL I+NN+    WS++EH+LFLAGMQLLG
Sbjct: 241 MIRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLG 300

Query: 301 KAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEA 338
           +  WKKIA++VVITKTH QVASHAQKYFL   + +  K KR+SIHDITT EPEF A  EA
Sbjct: 301 QGAWKKIANYVVITKTHTQVASHAQKYFL---RQTSPKHKRTSIHDITTAEPEFFALAEA 353

[Close]

BLAST of MELO3C017719.1 vs. NCBI nr
Match: KGN53075.1 (hypothetical protein Csa_014760 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 2.7e-76
Identity = 202/371 (54.45%), Postives = 241/371 (64.96%), Query Frame = 0


Query: 1   MQENKNNLLFLHSSS----TPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNN 60
           M ENK N+ F HSS     TPTS  NFDQNS  TL   I+D+      FSS    +W +N
Sbjct: 1   MAENK-NVSFPHSSGFSLHTPTSPSNFDQNSV-TLGPNIDDNYKMPLEFSSC---NWIDN 60

Query: 61  ---------------EGNH-----NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSS 120
                            NH     N   N +TTQ YP S   F   NDNFETP++YHPS 
Sbjct: 61  ARLEQLPAMEETSLRRVNHGLSLTNPNGNFETTQYYP-SFPQFNGLNDNFETPQFYHPSY 120

Query: 121 SQSVDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGH-NGFLSDVVNSSSTK 180
           +Q  DPN+NY+NM DAFL      CSPS LST HN  S NDSI + NGFLSDVVNS+STK
Sbjct: 121 TQFNDPNNNYNNMGDAFL------CSPSTLSTMHN--SSNDSIRYNNGFLSDVVNSNSTK 180

Query: 181 TSSKSLDSMTFN---NRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--V 240
           T+    +  +F+   N  S + +PQTSHF SPS+ S THNN QFADST YTGLLSDI   
Sbjct: 181 TTMTFENGCSFDSNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQ 240

Query: 241 KMRPRVPTMSSSTTNL---SSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLG 300
            +RP VPT+S STTNL   SSLPP+P  S NSL I+NN+    WS++EH+LFLAGMQLLG
Sbjct: 241 MIRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLG 300

Query: 301 KAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEA 339
           +  WKKIA++VV+TKTH QVASHAQKYFL   + +  K KR+SIHDITT EPEF A  E+
Sbjct: 301 QGAWKKIANYVVVTKTHTQVASHAQKYFL---RQTSQKHKRTSIHDITTAEPEFFALAES 352

[Close]

BLAST of MELO3C017719.1 vs. NCBI nr
Match: TYK16992.1 (myb-like protein J [Cucumis melo var. makuwa])

HSP 1 Score: 253.8 bits (647), Expect = 2.0e-63
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 212 MRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEW 271
           MRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNN IRNYWSLKEHRLFLAGMQLLGKAEW
Sbjct: 1   MRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNKIRNYWSLKEHRLFLAGMQLLGKAEW 60

Query: 272 KKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQ 331
           KKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQ
Sbjct: 61  KKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQ 120

Query: 332 HLKGLNQ 339
           HLKGLNQ
Sbjct: 121 HLKGLNQ 127

[Close]

BLAST of MELO3C017719.1 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-13
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+  EHRLFL G+   GK +W+ I+ + V+T+T  QVASHAQKYF+ L+ ++K  R+RSS
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK-DRRRSS 179

Query: 311 IHDITTV 318
           IHDIT+V
Sbjct: 180 IHDITSV 185

[Close]

BLAST of MELO3C017719.1 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-13
Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+ +EHRLFL G+   GK +W+ I+ + VI++T  QVASHAQKYF+ L+ +++  R+RSS
Sbjct: 144 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNR-DRRRSS 203

Query: 311 IHDITTV 318
           IHDIT+V
Sbjct: 204 IHDITSV 209

[Close]

BLAST of MELO3C017719.1 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-13
Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+ +EHRLFL G+   GK +W+ I+ + VI++T  QVASHAQKYF+ L+ +++  R+RSS
Sbjct: 144 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNR-DRRRSS 203

Query: 311 IHDITTV 318
           IHDIT+V
Sbjct: 204 IHDITSV 209

[Close]

BLAST of MELO3C017719.1 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.0e-12
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+ +EH+LFL G++  GK +W+ I+ + VIT+T  QVASHAQKYF+      K KR R+S
Sbjct: 134 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKR-RAS 193

Query: 311 IHDITTV 318
           IHDITTV
Sbjct: 194 IHDITTV 199

[Close]

BLAST of MELO3C017719.1 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-11
Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+ +EH+LFL G+Q +GK +W+ I+ + V T+T  QVASHAQKYFL    L++ +R+RSS
Sbjct: 97  WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNR-RRRRSS 156

Query: 311 IHDITT 317
           + DITT
Sbjct: 157 LFDITT 161

[Close]

BLAST of MELO3C017719.1 vs. ExPASy TrEMBL
Match: A0A5A7TMR3 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003420 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.2e-187
Identity = 336/338 (99.41%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MQENKNNLLFLHSSSTPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNNEGNH 60
           MQENKNNLLFLHSSSTPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNNE NH
Sbjct: 1   MQENKNNLLFLHSSSTPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNNEENH 60

Query: 61  NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT 120
           NHKRNL+TTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT
Sbjct: 61  NHKRNLETTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT 120

Query: 121 CSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSH 180
           CSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSH
Sbjct: 121 CSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSH 180

Query: 181 FYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSL 240
           FYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSL
Sbjct: 181 FYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSL 240

Query: 241 NIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDK 300
           NIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDK
Sbjct: 241 NIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDK 300

Query: 301 LSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 339
           LSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ
Sbjct: 301 LSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 338

[Close]

BLAST of MELO3C017719.1 vs. ExPASy TrEMBL
Match: A0A1S3BZH7 (myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 3.1e-166
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 40  MSRQLFSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQS 99
           MSRQLFSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQS
Sbjct: 1   MSRQLFSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQS 60

Query: 100 VDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSK 159
           VDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSK
Sbjct: 61  VDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGHNGFLSDVVNSSSTKTSSK 120

Query: 160 SLDSMTFNNRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTM 219
           SLDSMTFNNRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTM
Sbjct: 121 SLDSMTFNNRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDIVKMRPRVPTM 180

Query: 220 SSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVV 279
           SSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVV
Sbjct: 181 SSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVV 240

Query: 280 ITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 339
           ITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ
Sbjct: 241 ITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 299

[Close]

BLAST of MELO3C017719.1 vs. ExPASy TrEMBL
Match: A0A0A0KYZ4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G014580 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 207/370 (55.95%), Postives = 243/370 (65.68%), Query Frame = 0


Query: 1   MQENKNNLLFLHSSS----TPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNN 60
           M ENK N+ F HSS     TPTS +NFDQNS     S  ++HEMS  L     S +W NN
Sbjct: 1   MAENK-NVSFPHSSGSSLHTPTSPYNFDQNSVALSPSIDDNHEMSLGL--EFSSCNWINN 60

Query: 61  EG---------------NH-----NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSS 120
            G               NH     N   N +TTQ YP S   F   NDNFETP++YHPS 
Sbjct: 61  VGSEQLPTMEETSLRRVNHSLSLTNPNGNFETTQYYP-SFPQFNGLNDNFETPQFYHPSY 120

Query: 121 SQSVDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGH-NGFLSDVVNSSSTK 180
           +Q  DPN+NY+NM DAFL      CSPS LSTTHN  S NDSI + NGFLSDVVNS+STK
Sbjct: 121 TQFNDPNNNYNNMGDAFL------CSPSTLSTTHN--SSNDSIRYNNGFLSDVVNSNSTK 180

Query: 181 TSSKSLDSMTFN---NRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--V 240
           T+    +  +F+   N  S + +PQTSHF SPS+ S THNN QFADST YTGLLSDI   
Sbjct: 181 TTMTFENGCSFDSNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQ 240

Query: 241 KMRPRVPTMSSSTTNL---SSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLG 300
            +RP VPT+S STTNL   SSLPP+P  S NSL I+NN+    WS++EH+LFLAGMQLLG
Sbjct: 241 MIRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLG 300

Query: 301 KAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEA 338
           +  WKKIA++VVITKTH QVASHAQKYFL   + +  K KR+SIHDITT EPEF A  EA
Sbjct: 301 QGAWKKIANYVVITKTHTQVASHAQKYFL---RQTSPKHKRTSIHDITTAEPEFFALAEA 353

[Close]

BLAST of MELO3C017719.1 vs. ExPASy TrEMBL
Match: A0A0A0KTY5 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015160 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.3e-76
Identity = 202/371 (54.45%), Postives = 241/371 (64.96%), Query Frame = 0


Query: 1   MQENKNNLLFLHSSS----TPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNN 60
           M ENK N+ F HSS     TPTS  NFDQNS  TL   I+D+      FSS    +W +N
Sbjct: 1   MAENK-NVSFPHSSGFSLHTPTSPSNFDQNSV-TLGPNIDDNYKMPLEFSSC---NWIDN 60

Query: 61  ---------------EGNH-----NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSS 120
                            NH     N   N +TTQ YP S   F   NDNFETP++YHPS 
Sbjct: 61  ARLEQLPAMEETSLRRVNHGLSLTNPNGNFETTQYYP-SFPQFNGLNDNFETPQFYHPSY 120

Query: 121 SQSVDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGH-NGFLSDVVNSSSTK 180
           +Q  DPN+NY+NM DAFL      CSPS LST HN  S NDSI + NGFLSDVVNS+STK
Sbjct: 121 TQFNDPNNNYNNMGDAFL------CSPSTLSTMHN--SSNDSIRYNNGFLSDVVNSNSTK 180

Query: 181 TSSKSLDSMTFN---NRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--V 240
           T+    +  +F+   N  S + +PQTSHF SPS+ S THNN QFADST YTGLLSDI   
Sbjct: 181 TTMTFENGCSFDSNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQ 240

Query: 241 KMRPRVPTMSSSTTNL---SSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLG 300
            +RP VPT+S STTNL   SSLPP+P  S NSL I+NN+    WS++EH+LFLAGMQLLG
Sbjct: 241 MIRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLG 300

Query: 301 KAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEA 339
           +  WKKIA++VV+TKTH QVASHAQKYFL   + +  K KR+SIHDITT EPEF A  E+
Sbjct: 301 QGAWKKIANYVVVTKTHTQVASHAQKYFL---RQTSQKHKRTSIHDITTAEPEFFALAES 352

[Close]

BLAST of MELO3C017719.1 vs. ExPASy TrEMBL
Match: A0A5D3CZL0 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001340 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 9.9e-64
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 212 MRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEW 271
           MRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNN IRNYWSLKEHRLFLAGMQLLGKAEW
Sbjct: 1   MRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNKIRNYWSLKEHRLFLAGMQLLGKAEW 60

Query: 272 KKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQ 331
           KKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQ
Sbjct: 61  KKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQ 120

Query: 332 HLKGLNQ 339
           HLKGLNQ
Sbjct: 121 HLKGLNQ 127

[Close]

BLAST of MELO3C017719.1 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 9.9e-16
Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+  EH+LFL G++  GK +W+ I+ +VV+T+T  QVASHAQKYFL  + + K +RKRSS
Sbjct: 101 WTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKK-ERKRSS 160

Query: 311 IHDITTVE 319
           IHDITTV+
Sbjct: 161 IHDITTVD 167

[Close]

BLAST of MELO3C017719.1 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 8.4e-15
Identity = 37/67 (55.22%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+ +EHRLFL G+   GK +W+ I+ + VI++T  QVASHAQKYF+ L+ +++  R+RSS
Sbjct: 136 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNR-DRRRSS 195

Query: 311 IHDITTV 318
           IHDITTV
Sbjct: 196 IHDITTV 201

[Close]

BLAST of MELO3C017719.1 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+  EHRLFL G+   GK +W+ I+ + V+T+T  QVASHAQKYF+ L+ ++K  R+RSS
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK-DRRRSS 179

Query: 311 IHDITTV 318
           IHDIT+V
Sbjct: 180 IHDITSV 185

[Close]

BLAST of MELO3C017719.1 vs. TAIR 10
Match: AT5G23650.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-14
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W   EHR FL G++  GK +W+ I+ H V+T+T  QVASHAQKYF H++   K KRKR S
Sbjct: 122 WKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDK-KRKRPS 181

Query: 311 IHDITTVE 319
           IHDIT  E
Sbjct: 182 IHDITIAE 188

[Close]

BLAST of MELO3C017719.1 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 75.9 bits (185), Expect = 7.1e-14
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 251 WSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSS 310
           W+ +EH+LFL G++  GK +W+ I+ + VIT+T  QVASHAQKYF+      K KR R+S
Sbjct: 143 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKR-RAS 202

Query: 311 IHDITTVEPEFLAEVE 327
           IHDITTV  E  A +E
Sbjct: 203 IHDITTVNLEEEASLE 217

The following BLAST results are available for this feature:

BLAST of MELO3C017719.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044592.1	6.5e-187	99.41	myb-like protein J [Cucumis melo var. makuwa]	[more]
XP_008454484.1	6.4e-166	100.00	PREDICTED: myb-like protein J [Cucumis melo]	[more]
XP_011654326.2	9.1e-80	55.68	myb-like protein J [Cucumis sativus] >KAE8649106.1 hypothetical protein Csa_0154...	[more]
KGN53075.1	2.7e-76	54.45	hypothetical protein Csa_014760 [Cucumis sativus]	[more]
TYK16992.1	2.0e-63	99.21	myb-like protein J [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C017719.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNN6	1.5e-13	55.22	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
B8A9B2	3.4e-13	53.73	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	3.4e-13	53.73	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q8S9H7	5.0e-12	55.22	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q2V9B0	1.1e-11	53.03	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]

BLAST of MELO3C017719.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMR3	3.2e-187	99.41	Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00...	[more]
A0A1S3BZH7	3.1e-166	100.00	myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1	[more]
A0A0A0KYZ4	1.2e-80	55.95	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G01458...	[more]
A0A0A0KTY5	1.3e-76	54.45	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G01516...	[more]
A0A5D3CZL0	9.9e-64	99.21	Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G0...	[more]

BLAST of MELO3C017719.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	9.9e-16	57.35	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	8.4e-15	55.22	Duplicated homeodomain-like superfamily protein	[more]
AT5G08520.1	1.1e-14	55.22	Duplicated homeodomain-like superfamily protein	[more]
AT5G23650.1	1.4e-14	55.88	Homeodomain-like transcriptional regulator	[more]
AT5G58900.1	7.1e-14	52.63	Homeodomain-like transcriptional regulator	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 247..297 e-value: 1.2E-4 score: 31.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 243..295 score: 6.666925
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 251..295 e-value: 1.97833E-5 score: 39.481
None	No IPR available	GENE3D	1.10.10.60		coord: 251..298 e-value: 1.8E-11 score: 46.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..70
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 244..319
None	No IPR available	PANTHER	PTHR44191:SF21	TRANSCRIPTION FACTOR SRM1	coord: 244..319
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 248..294 e-value: 3.6E-9 score: 36.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 251..299 score: 12.735502
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 248..297 e-value: 1.3E-14 score: 52.2
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 248..300

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C017719	MELO3C017719	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C017719.1:exon:220291	MELO3C017719.1:exon:220291	exon
MELO3C017719.1:exon:220290	MELO3C017719.1:exon:220290	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C017719.1:cds	MELO3C017719.1:cds	CDS
MELO3C017719.1:cds	MELO3C017719.1:cds_2	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C017719.1:five_prime_utr	MELO3C017719.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C017719.1	MELO3C017719.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding