
MELO3C016148.jh1.t2 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GGAGTGTGAAATGAATTAGGTTGGGATATCCCCCCGCGTTTGTTCAAGCAGTCAATTTCTTTGACAAATTTAACTATTGAAAAAGGGTATTTGGCCCAACTTCTCCGTCAAAATCTGCTATAAAAAGGGCAACAACCGCAGCAGATCGTCAATCTCGTCGCGCCGCCGCCACTGCTACAGATCGTCTCCCCGTCGCCCCATTGGTGGTACGAAAGCTTCCTTTGTCTTTCTCTCTTTGCTTTGTAGCCCTTATTTCGATCATAAATTTGATTCTTTCTTTTTTTTTTTAAAAAAAAATTCATGTACTCGAGAACTAGCCATTGTTAGTGTTACTGTTGCGTTAGGGAAATCGTAGTTTAGTTCTCATCTAAAACAAAGAAAATCTCATGAATTGGGTTGAGCTATAATGACTAACGAAGATGAAGATGGTAGTCTAAAAAATGAATCAAACTTCTTGTTCTAAGTGAAAAATGAAAAGGGGTTTCTATGGTAGCATTTCTTTTGGCCTCTATTTCATAGATTGAAGGGAGGACCGTGAAGAATGAAATTGGCCGATTTGGTGCAATCCATGACTGCCCAGATTTGTACTGCCGGTGGTCATATTCACTTGAACATGATGTTTTCCTTACTCATCTGAGTCTATTCCCAAGACAATAGTAGACTTGAAAGTTTAATGTTTTATATGCAAATTTTGGCTTTAGCTATGGTAGGATTATGCTTTCCTTTTGTACTGAATCTGTTCATGTATTCCCCTTGACTTTAACGAGGGGATCTGAAAGTTGGATCAGGGAATCATGTTAAGACATTAAAGTTCGGCTAGTGAGTTGATTATATTGTGAGTTCGGTGCTATATGAATCCACTTAGCGTCATTAATAATCTATAATAAGTTCCAACAACTTTTACATGGTTGATTGTGGGTCATAAGATTATGGGCGAATAGAAGATGATGATTGAAGCAGGTACTTATGATAATCGGGCATATCTTACTGTTCTCCTGGCGCGGCTAATTGTAGTTGTGCCGAGTTTCAAGGATATGTCTGTATGATTTACAAGACTGCCGTCTGATTCATTCTTTGTTCATTATATTTTATGTTTAATGGCCAATAAATAGATATAGCCCTTTCTGTACAAGCTCTATTGGTTATAACTTCAATGACCAAACTATAACTTGGGCCACCTTTTGAATATTAGTTGATTTTAAGTTAAATCCAGATTTATATCTCTCTAGCTGAATCTTCTGTTCATCAACTGTCTTAAGTTATGAGGATGAACCAGCAGCATTTTGATGTCACAAGGAAAGGGAAATAGGTTAGGTTTTGACAACGGGGAGAGAGATAGTCGTGAGATTTGGGAGCGATTTCAATTAGTCATCTAGTTTTGTGCTTTTTCAAGTGAACTTTTGCGTCATATTGTTATATATTTTTTCTACAACTGTGCAGGTTTCATTACACTCATAATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAGCCATACCCTAAGTCACGATTTTGTCGGGGTGTCCCCGATCCTAAGATCAGGATCTACGATGTTGGAATGAAGAAGAAAGGAGTTGATGAATTCCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCCAGCGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAATAAGTATATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTTCGGGTGCACCCCTTCCATGTTCTTCGGATTAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAGGGAACCTGTGCAAGGGTAGACATTGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGACAGAATGCACAGGAGGCTCTCCGGCGTGCTAAGTTCAAGTTTCCTGGCCGTCAGAAGATCATTGTGAGCAGGAAGTGGGGTTTCACGAAATTCAGCCGAGCTGATTATCTGAAGTACAAGGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAACTGCCTAGATTCATTTTGTTGTGTTTTATTGTTCTCTTTATTTGAAATCATTGTTGACATTATTACCTTGGTTGTTTAAACTCTTGTGAAACGAGACAGAGATTGCTTTTTTATACTATTTTTATCTTTTATCCAAGTAAATTCTTTGTCTTCTTTTG GGAGTGTGAAATGAATTAGGTTGGGATATCCCCCCGCGTTTGTTCAAGCAGTCAATTTCTTTGACAAATTTAACTATTGAAAAAGGGTATTTGGCCCAACTTCTCCGTCAAAATCTGCTATAAAAAGGGCAACAACCGCAGCAGATCGTCAATCTCGTCGCGCCGCCGCCACTGCTACAGATCGTCTCCCCGTCGCCCCATTGGTGGTTTCATTACACTCATAATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAGCCATACCCTAAGTCACGATTTTGTCGGGGTGTCCCCGATCCTAAGATCAGGATCTACGATGTTGGAATGAAGAAGAAAGGAGTTGATGAATTCCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCCAGCGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAATAAGTATATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTTCGGGTGCACCCCTTCCATGTTCTTCGGATTAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAGGGAACCTGTGCAAGGGTAGACATTGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGACAGAATGCACAGGAGGCTCTCCGGCGTGCTAAGTTCAAGTTTCCTGGCCGTCAGAAGATCATTGTGAGCAGGAAGTGGGGTTTCACGAAATTCAGCCGAGCTGATTATCTGAAGTACAAGGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAACTGCCTAGATTCATTTTGTTGTGTTTTATTGTTCTCTTTATTTGAAATCATTGTTGACATTATTACCTTGGTTGTTTAAACTCTTGTGAAACGAGACAGAGATTGCTTTTTTATACTATTTTTATCTTTTATCCAAGTAAATTCTTTGTCTTCTTTTG ATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAGCCATACCCTAAGTCACGATTTTGTCGGGGTGTCCCCGATCCTAAGATCAGGATCTACGATGTTGGAATGAAGAAGAAAGGAGTTGATGAATTCCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCCAGCGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAATAAGTATATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTTCGGGTGCACCCCTTCCATGTTCTTCGGATTAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAGGGAACCTGTGCAAGGGTAGACATTGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGACAGAATGCACAGGAGGCTCTCCGGCGTGCTAAGTTCAAGTTTCCTGGCCGTCAGAAGATCATTGTGAGCAGGAAGTGGGGTTTCACGAAATTCAGCCGAGCTGATTATCTGAAGTACAAGGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAACTGCCTAG MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA Homology
BLAST of MELO3C016148.jh1.t2 vs. NCBI nr
Match: XP_008451785.1 (PREDICTED: 60S ribosomal protein L10-like [Cucumis melo] >TYK16331.1 60S ribosomal protein L10-like [Cucumis melo var. makuwa]) HSP 1 Score: 457 bits (1177), Expect = 1.14e-162 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. NCBI nr
Match: XP_038906131.1 (60S ribosomal protein L10-like [Benincasa hispida]) HSP 1 Score: 456 bits (1174), Expect = 3.27e-162 Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. NCBI nr
Match: XP_004137249.1 (60S ribosomal protein L10 [Cucumis sativus] >KAE8649248.1 hypothetical protein Csa_015270 [Cucumis sativus]) HSP 1 Score: 454 bits (1169), Expect = 1.90e-161 Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. NCBI nr
Match: XP_022931333.1 (60S ribosomal protein L10-like [Cucurbita moschata] >XP_022985026.1 60S ribosomal protein L10-like [Cucurbita maxima] >XP_023553543.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >KAG6577053.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 452 bits (1163), Expect = 1.56e-160 Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. NCBI nr
Match: XP_022942137.1 (60S ribosomal protein L10-like isoform X2 [Cucurbita moschata] >XP_022942138.1 60S ribosomal protein L10-like isoform X2 [Cucurbita moschata] >XP_023526268.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >XP_023526277.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >KAG6600485.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 450 bits (1157), Expect = 1.28e-159 Identity = 216/220 (98.18%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 5.2e-119 Identity = 199/217 (91.71%), Postives = 211/217 (97.24%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 6.7e-119 Identity = 203/220 (92.27%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 2.6e-118 Identity = 203/219 (92.69%), Postives = 209/219 (95.43%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy Swiss-Prot
Match: A2ZCQ7 (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 SV=2) HSP 1 Score: 407.9 bits (1047), Expect = 7.2e-113 Identity = 192/219 (87.67%), Postives = 208/219 (94.98%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q0ITS8 (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SC34 PE=2 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 7.2e-113 Identity = 192/219 (87.67%), Postives = 208/219 (94.98%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5D3CWP6 (60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001130 PE=3 SV=1) HSP 1 Score: 457 bits (1177), Expect = 5.53e-163 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy TrEMBL
Match: A0A1S3BT36 (60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103492967 PE=3 SV=1) HSP 1 Score: 457 bits (1177), Expect = 5.53e-163 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1J6Y1 (60S ribosomal protein L10-like OS=Cucurbita maxima OX=3661 GN=LOC111483117 PE=3 SV=1) HSP 1 Score: 452 bits (1163), Expect = 7.55e-161 Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1EY90 (60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111437559 PE=3 SV=1) HSP 1 Score: 452 bits (1163), Expect = 7.55e-161 Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1FU16 (60S ribosomal protein L10-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447292 PE=3 SV=1) HSP 1 Score: 450 bits (1157), Expect = 6.20e-160 Identity = 216/220 (98.18%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein ) HSP 1 Score: 407.5 bits (1046), Expect = 6.7e-114 Identity = 193/220 (87.73%), Postives = 203/220 (92.27%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 ) HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-113 Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein ) HSP 1 Score: 404.4 bits (1038), Expect = 5.7e-113 Identity = 190/216 (87.96%), Postives = 201/216 (93.06%), Query Frame = 0
BLAST of MELO3C016148.jh1.t2 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein ) HSP 1 Score: 274.2 bits (700), Expect = 8.8e-74 Identity = 139/216 (64.35%), Postives = 149/216 (68.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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