MELO3C016114.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO3C016114.jh1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein ROOT INITIATION DEFECTIVE 3-like
Location	chr07: 19906743 .. 19908426 (+)
Sequence length	1684
RNA-Seq Expression	MELO3C016114.jh1.t1
Synteny	MELO3C016114.jh1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGTCTCATTGTTGCCTATGATGCCTCCACAGGCACCCCTCTAGCCAACTTCAACAGTAGCCGCTCGCCTCGCCGTGGCATCACCCGAGCCGGGAAAAGTTTCATAGCTGTCTCCCACATTTGCCCGGTCACTGCTTCGGGTTCAATCCATATTTACAATTGGTGGACTTCATCTGCCTTCCAATGCCTCACTGTCCCAGAACCCGTTGCCCCTCTCACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCCTTTCAGGCTACATCCATATTCTCTCTCTTCCATCGGGGGATGTTCTCAACTCTCTACCTGCACACAAAAAGCCAGTCTCTTGCCTTAAACTTAGTGCGGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACAATTGTTGTCATGCCAATCTTTCAACTTGTACAAGCCAAACCACGAGAAAATGCAACCGAACACATTCTGCATCAGTTTTTAGCACATACTGATTCGGTGACTTCCATTTACTCGGGCATGGGGATATCCAGTACCAAAATAGTCTCCTGCTCATTGGATGCCAGATGCAAATTTTGGAGCTTGCTCTCAGGAACCATCTTGCACACCGTGGTATTCCCTTGTGCCATTTTCAGTGTGGTCTTAGAACCATCAGAGATAGAATTTTTCGCTGCAGGATCTGACGGCTTGGTGTACAAGGGATCGTTGAGACATAACAACAAACACCGTAGGGGCACAGACTATGACCTAATTCCACAAATCTCCAATGACTTAGTGTACAAGCGCTCATTGAGGCATAAAAACAAACACCTAACAGGCACTAGCTTTGAACTAATTCCATGGTCGCCAAAGCACGAGGCTGCAGTTGTTTCTATAGTCATAGTAAACGAAGGAAAGCACTTAATATCTGCAGCAGAAGATGGGAGCATCTGGGTCTGGGAAGTGAAGAAAGGGCAGGTCATAATGGCCCTTGAGAATGAGATGGGAAGCATAAGCGATTTGGTGATGGCCACAGAAAGAGCCCATGGTAAAGAACAGTGTGTCAGAACAGACAGGCATGGAAGAGAAATAAAAATTAGTGAGAGGTTTAGATTACCCATTAAAATGTTGGGGTTGTCAATAAAAGAAACAGTTGATATGCAAGGCGAGCTGGCAGCGGCCGGAAGCGACGTGAGGAGAGCCATTGAGATGCTGGAATCAGCCATTGCTGTGTATGAGAAGATGTTAGAATTAATCCTCAAGGAAGCCGAAGCAAGCTACAATCAAAGAGAAGAAACACAATGATAGTGATAATATAAGGTCATGCAAATCCATCCCCCCAACATCTAATTTTGCAAATTTTTGCTTCTATGGATCAATGCTATTCAGAAGCTAAACATAAATCGACCATAATTAGAGTCCAAAATATTTCTTATAGCGTTCGAAATATCTAATTCCTATCTTAAAAGTTCAACTTATAATTTACTCGCTTATGAAATCATTAATGTTAGTAATGAAAAGTAACCTTTATGATTATTTTTGCTTGATATAAATTATATAAGTATTTATTTCTCTTTTATAAAAAAGTGAAGAGGTATGCTACATGAAATTGCAATGACAAATTTCTTATACAGTGAATTCAACACTAGCCAAATTGCATGTA

mRNA sequence

ATGACTATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGTCTCATTGTTGCCTATGATGCCTCCACAGGCACCCCTCTAGCCAACTTCAACAGTAGCCGCTCGCCTCGCCGTGGCATCACCCGAGCCGGGAAAAGTTTCATAGCTGTCTCCCACATTTGCCCGGTCACTGCTTCGGGTTCAATCCATATTTACAATTGGTGGACTTCATCTGCCTTCCAATGCCTCACTGTCCCAGAACCCGTTGCCCCTCTCACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCCTTTCAGGCTACATCCATATTCTCTCTCTTCCATCGGGGGATGTTCTCAACTCTCTACCTGCACACAAAAAGCCAGTCTCTTGCCTTAAACTTAGTGCGGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACAATTGTTGTCATGCCAATCTTTCAACTTGTACAAGCCAAACCACGAGAAAATGCAACCGAACACATTCTGCATCAGTTTTTAGCACATACTGATTCGGTGACTTCCATTTACTCGGGCATGGGGATATCCAGTACCAAAATAGTCTCCTGCTCATTGGATGCCAGATGCAAATTTTGGAGCTTGCTCTCAGGAACCATCTTGCACACCGTGGTATTCCCTTGTGCCATTTTCAGTGTGGTCTTAGAACCATCAGAGATAGAATTTTTCGCTGCAGGATCTGACGGCTTGGTGTACAAGGGATCGTTGAGACATAACAACAAACACCGTAGGGGCACAGACTATGACCTAATTCCACAAATCTCCAATGACTTAGTGTACAAGCGCTCATTGAGGCATAAAAACAAACACCTAACAGGCACTAGCTTTGAACTAATTCCATGGTCGCCAAAGCACGAGGCTGCAGTTGTTTCTATAGTCATAGTAAACGAAGGAAAGCACTTAATATCTGCAGCAGAAGATGGGAGCATCTGGGTCTGGGAAGTGAAGAAAGGGCAGGTCATAATGGCCCTTGAGAATGAGATGGGAAGCATAAGCGATTTGGTGATGGCCACAGAAAGAGCCCATGGTAAAGAACAGTGTGTCAGAACAGACAGGCATGGAAGAGAAATAAAAATTAGTGAGAGGTTTAGATTACCCATTAAAATGTTGGGGTTGTCAATAAAAGAAACAGTTGATATGCAAGGCGAGCTGGCAGCGGCCGGAAGCGACGTGAGGAGAGCCATTGAGATGCTGGAATCAGCCATTGCTGTGTATGAGAAGATGTTAGAATTAATCCTCAAGGAAGCCGAAGCAAGCTACAATCAAAGAGAAGAAACACAATGATAGTGATAATATAAGGTCATGCAAATCCATCCCCCCAACATCTAATTTTGCAAATTTTTGCTTCTATGGATCAATGCTATTCAGAAGCTAAACATAAATCGACCATAATTAGAGTCCAAAATATTTCTTATAGCGTTCGAAATATCTAATTCCTATCTTAAAAGTTCAACTTATAATTTACTCGCTTATGAAATCATTAATGTTAGTAATGAAAAGTAACCTTTATGATTATTTTTGCTTGATATAAATTATATAAGTATTTATTTCTCTTTTATAAAAAAGTGAAGAGGTATGCTACATGAAATTGCAATGACAAATTTCTTATACAGTGAATTCAACACTAGCCAAATTGCATGTA

Coding sequence (CDS)

ATGACTATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGTCTCATTGTTGCCTATGATGCCTCCACAGGCACCCCTCTAGCCAACTTCAACAGTAGCCGCTCGCCTCGCCGTGGCATCACCCGAGCCGGGAAAAGTTTCATAGCTGTCTCCCACATTTGCCCGGTCACTGCTTCGGGTTCAATCCATATTTACAATTGGTGGACTTCATCTGCCTTCCAATGCCTCACTGTCCCAGAACCCGTTGCCCCTCTCACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCCTTTCAGGCTACATCCATATTCTCTCTCTTCCATCGGGGGATGTTCTCAACTCTCTACCTGCACACAAAAAGCCAGTCTCTTGCCTTAAACTTAGTGCGGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACAATTGTTGTCATGCCAATCTTTCAACTTGTACAAGCCAAACCACGAGAAAATGCAACCGAACACATTCTGCATCAGTTTTTAGCACATACTGATTCGGTGACTTCCATTTACTCGGGCATGGGGATATCCAGTACCAAAATAGTCTCCTGCTCATTGGATGCCAGATGCAAATTTTGGAGCTTGCTCTCAGGAACCATCTTGCACACCGTGGTATTCCCTTGTGCCATTTTCAGTGTGGTCTTAGAACCATCAGAGATAGAATTTTTCGCTGCAGGATCTGACGGCTTGGTGTACAAGGGATCGTTGAGACATAACAACAAACACCGTAGGGGCACAGACTATGACCTAATTCCACAAATCTCCAATGACTTAGTGTACAAGCGCTCATTGAGGCATAAAAACAAACACCTAACAGGCACTAGCTTTGAACTAATTCCATGGTCGCCAAAGCACGAGGCTGCAGTTGTTTCTATAGTCATAGTAAACGAAGGAAAGCACTTAATATCTGCAGCAGAAGATGGGAGCATCTGGGTCTGGGAAGTGAAGAAAGGGCAGGTCATAATGGCCCTTGAGAATGAGATGGGAAGCATAAGCGATTTGGTGATGGCCACAGAAAGAGCCCATGGTAAAGAACAGTGTGTCAGAACAGACAGGCATGGAAGAGAAATAAAAATTAGTGAGAGGTTTAGATTACCCATTAAAATGTTGGGGTTGTCAATAAAAGAAACAGTTGATATGCAAGGCGAGCTGGCAGCGGCCGGAAGCGACGTGAGGAGAGCCATTGAGATGCTGGAATCAGCCATTGCTGTGTATGAGAAGATGTTAGAATTAATCCTCAAGGAAGCCGAAGCAAGCTACAATCAAAGAGAAGAAACACAATGA

Protein sequence

MTMPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHEAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKMLELILKEAEASYNQREETQ

Homology

[Close]

BLAST of MELO3C016114.jh1.t1 vs. NCBI nr
Match: KAA0059059.1 (protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 873 bits (2255), Expect = 0.0
Identity = 440/441 (99.77%), Postives = 440/441 (99.77%), Query Frame = 0


Query: 1   MTMPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDG IVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240
           VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG
Sbjct: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300
           SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE
Sbjct: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360

Query: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420
           CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE
Sbjct: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAEASYNQREETQ 441
           KMLELILKEAEASYNQREETQ
Sbjct: 421 KMLELILKEAEASYNQREETQ 441

[Close]

BLAST of MELO3C016114.jh1.t1 vs. NCBI nr
Match: XP_008451730.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo] >TYK16268.1 protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 867 bits (2241), Expect = 0.0
Identity = 438/441 (99.32%), Postives = 438/441 (99.32%), Query Frame = 0


Query: 1   MTMPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDG IVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYL AGGLSGYIHILSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLLAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240
           VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG
Sbjct: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300
           SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTS ELIPWSPKHE
Sbjct: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSSELIPWSPKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360

Query: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420
           CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE
Sbjct: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAEASYNQREETQ 441
           KMLELILKEAEASYNQREETQ
Sbjct: 421 KMLELILKEAEASYNQREETQ 441

[Close]

BLAST of MELO3C016114.jh1.t1 vs. NCBI nr
Match: KGN53581.1 (hypothetical protein Csa_015091 [Cucumis sativus])

HSP 1 Score: 823 bits (2125), Expect = 1.06e-299
Identity = 414/441 (93.88%), Postives = 427/441 (96.83%), Query Frame = 0


Query: 1   MTMPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDG IVAYDASTGT LA+FNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTHLASFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240
           VTSIYSGMGISST+IVSCSLD RCK W+LLSGTILHTVVFPCAIFSVVLEPSE EFFAAG
Sbjct: 181 VTSIYSGMGISSTQIVSCSLDGRCKLWNLLSGTILHTVVFPCAIFSVVLEPSETEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300
           SDGLVYKGSL HNNK RRGTDY+LIPQISNDLVY+RSLRHKNKHLTGTS ELIPWS KHE
Sbjct: 241 SDGLVYKGSLGHNNKRRRGTDYELIPQISNDLVYRRSLRHKNKHLTGTSSELIPWSTKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATER+HGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERSHGKEQ 360

Query: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420
           CV+TD HG  ++ISERFRLPIKMLGLSIK+TV+MQGE+ AAGSDV RAIEMLESAIAVYE
Sbjct: 361 CVKTDSHGGAMEISERFRLPIKMLGLSIKQTVEMQGEVGAAGSDVSRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAEASYNQREETQ 441
           KMLELILKEA+ASYNQREETQ
Sbjct: 421 KMLELILKEAKASYNQREETQ 441

[Close]

BLAST of MELO3C016114.jh1.t1 vs. NCBI nr
Match: XP_011654344.2 (protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus])

HSP 1 Score: 819 bits (2115), Expect = 3.28e-298
Identity = 412/439 (93.85%), Postives = 425/439 (96.81%), Query Frame = 0


Query: 3   MPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           MPSSPQEVVLASSPDG IVAYDASTGT LA+FNSSRSPRRGITRAGKSFIAVSHICPVTA
Sbjct: 1   MPSSPQEVVLASSPDGPIVAYDASTGTHLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 60

Query: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP 122
           SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP
Sbjct: 61  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182
           AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT
Sbjct: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 180

Query: 183 SIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSD 242
           SIYSGMGISST+IVSCSLD RCK W+LLSGTILHTVVFPCAIFSVVLEPSE EFFAAGSD
Sbjct: 181 SIYSGMGISSTQIVSCSLDGRCKLWNLLSGTILHTVVFPCAIFSVVLEPSETEFFAAGSD 240

Query: 243 GLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHEAA 302
           GLVYKGSL HNNK RRGTDY+LIPQISNDLVY+RSLRHKNKHLTGTS ELIPWS KHEAA
Sbjct: 241 GLVYKGSLGHNNKRRRGTDYELIPQISNDLVYRRSLRHKNKHLTGTSSELIPWSTKHEAA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCV 362
           VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATER+HGKEQCV
Sbjct: 301 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERSHGKEQCV 360

Query: 363 RTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKM 422
           +TD HG  ++ISERFRLPIKMLGLSIK+TV+MQGE+ AAGSDV RAIEMLESAIAVYEKM
Sbjct: 361 KTDSHGGAMEISERFRLPIKMLGLSIKQTVEMQGEVGAAGSDVSRAIEMLESAIAVYEKM 420

Query: 423 LELILKEAEASYNQREETQ 441
           LELILKEA+ASYNQREETQ
Sbjct: 421 LELILKEAKASYNQREETQ 439

[Close]

BLAST of MELO3C016114.jh1.t1 vs. NCBI nr
Match: XP_038889657.1 (protein ROOT INITIATION DEFECTIVE 3-like [Benincasa hispida])

HSP 1 Score: 763 bits (1971), Expect = 2.64e-276
Identity = 389/439 (88.61%), Postives = 407/439 (92.71%), Query Frame = 0


Query: 3   MPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           MP S QEVVLASSPDG IVAYDASTGTPLA+F+ S SPRRGITRAGKSFIAVSHI PVTA
Sbjct: 1   MPFSQQEVVLASSPDGPIVAYDASTGTPLASFSGSCSPRRGITRAGKSFIAVSHISPVTA 60

Query: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP 122
            GSIHIYNWWTSSAFQ LTVPEPVAPLTAT DGFYLFAGGLSGYIH LSLPSGDVLNSLP
Sbjct: 61  LGSIHIYNWWTSSAFQSLTVPEPVAPLTATTDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182
           AHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKP+ENAT HILHQFLAHTDSVT
Sbjct: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPQENATTHILHQFLAHTDSVT 180

Query: 183 SIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSD 242
           SIYSGMGISS++IVSCSLD RCKFWSLLSGTILHTVVFPCAIFSVVLEP+E EFFAAGSD
Sbjct: 181 SIYSGMGISSSQIVSCSLDGRCKFWSLLSGTILHTVVFPCAIFSVVLEPTETEFFAAGSD 240

Query: 243 GLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHEAA 302
           GLVYK SLRHNNKH  GTDY+ IP ISNDL YKR LR KNKHLTGTS+ELIPWSPKHEAA
Sbjct: 241 GLVYKASLRHNNKHLMGTDYEPIPPISNDLGYKRPLRRKNKHLTGTSYELIPWSPKHEAA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCV 362
           V+SIVI+NEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATE++HGKEQ  
Sbjct: 301 VISIVIINEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATEKSHGKEQS- 360

Query: 363 RTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKM 422
            T  HGR ++ISE FRLPIKMLGLSI +TVDMQ  +AAAGSDVRRAIEMLESAIAVYEKM
Sbjct: 361 -TGSHGRAMEISESFRLPIKMLGLSINQTVDMQEAVAAAGSDVRRAIEMLESAIAVYEKM 420

Query: 423 LELILKEAEASYNQREETQ 441
           LELILKEA+ASYNQREE Q
Sbjct: 421 LELILKEAKASYNQREEKQ 437

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.8e-37
Identity = 104/335 (31.04%), Postives = 154/335 (45.97%), Query Frame = 0


Query: 10  VVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTASGSIHIY 69
           V+ +SS D  I ++D  TGT    F    SP  G+T  G+ F+A S +     SGSI  +
Sbjct: 5   VIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYW 64

Query: 70  NWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLPAHKKPVS 129
           +W    A       EP+  L A  +G YL  GG+SG I++  + +G +L     H + V+
Sbjct: 65  SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVT 124

Query: 130 CLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVTSIYSGMG 189
           CL  S D SLL+SG  DG+I V  + +L     R+       H F  HT SVT I    G
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYG 184

Query: 190 ISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSDGLVYKGS 249
             +  I+S S D  CK WSL  G +L  ++FP  I ++ L+P    F+A   D  +Y G+
Sbjct: 185 GCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGA 244

Query: 250 LRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHEAAVVSIVIV 309
           +   +++  GT                S+  K K                  A+  +   
Sbjct: 245 INATSEY--GTQ------------VLGSVSEKGK------------------AITCLAYC 304

Query: 310 NEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGS 345
            +G  LIS +EDG + VW+ K  + +  L +  GS
Sbjct: 305 ADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGS 307

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q499N3 (WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.5e-24
Identity = 87/338 (25.74%), Postives = 157/338 (46.45%), Query Frame = 0


Query: 5   SSPQEVVL---ASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVT 64
           ++P EVV+   +++P    + ++  +G  L  +   ++  RG+      ++  +      
Sbjct: 2   AAPMEVVVCTDSAAPLWSCMVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ----- 61

Query: 65  ASGSIHIYNWWTSSAFQC---LTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVL 124
             G  +I  W      Q    +  P PV  LT  P+G Y+ A G++  I++  + +G++L
Sbjct: 62  -QGKNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLA-GIAESIYLWEVSTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKP-RENATEHILHQFLAH 184
             L  H + VSCLK + DGS  +S G D  ++   +  ++QA P R  A  H+  Q   H
Sbjct: 122 VILSRHYQDVSCLKFTGDGSHFVSAGKDCLVLAWSLCSVLQADPSRILAPRHVWSQ---H 181

Query: 185 TDSVTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFF 244
           T  +T ++ G G    ++ + SLD   K W++ SG +L +V+F   I SV ++ +E   F
Sbjct: 182 TLPITDLHCGFGGPMARVATASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIF 241

Query: 245 AAGSDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSP 304
             GSDG +++  L      R   +    P+ +   V+K    H+N+              
Sbjct: 242 CGGSDGSIFQVDLCSRPGPR---EQSFQPEQNTGKVFK---GHRNQ-------------- 301

Query: 305 KHEAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVI 336
                V  + +  +G  L+S + D S+ +W+VK  Q +
Sbjct: 302 -----VTCLSVSTDGSILLSGSHDESVRLWDVKSKQCV 304

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy Swiss-Prot
Match: A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 4.3e-24
Identity = 82/340 (24.12%), Postives = 158/340 (46.47%), Query Frame = 0


Query: 5   SSPQEVVLASSPDGLI---VAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVT 64
           ++P E+VL++   G +     ++  TG+ L  +    +  RG+   G  ++    +    
Sbjct: 2   AAPLELVLSADAAGQVANCTVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQL---- 61

Query: 65  ASGSIHIYNWWTSSAFQC---LTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVL 124
             G  +I  W      Q    +  P PV  L+A+P+G YL A G++  I++  + +G +L
Sbjct: 62  --GKNYINVWELQRRDQLQQKIVCPGPVNCLSASPNGLYLVA-GIAESIYLWEVSTGHLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHT 184
             L +H + V+CL  + D S +ISG  D  ++V  ++ ++Q +          + +  H+
Sbjct: 122 AILNSHYQDVTCLTFTDDSSHIISGAKDSLVLVWGLYSVLQVETSRGPEPR--YVWSRHS 181

Query: 185 DSVTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFA 244
             +T +  G+G    ++ + SLD   K W + SG +L +V+F   I SV  +P+E   F 
Sbjct: 182 LPITDVQCGIGGPQARVATSSLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFC 241

Query: 245 AGSDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPK 304
            GSDG++Y+  L    + R    +        ++V+K    H+N+               
Sbjct: 242 GGSDGVIYQVDLYTTPEQRERPFHP-----EQEMVFK---GHRNQ--------------- 301

Query: 305 HEAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMAL 339
               V  + +  +G  LIS + D ++ VW+++  Q + ++
Sbjct: 302 ----VTCLSVSLDGSMLISGSHDETVCVWDIQSKQSLRSV 305

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q4VBE8 (WD repeat-containing protein 18 OS=Mus musculus OX=10090 GN=Wdr18 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.6e-23
Identity = 87/338 (25.74%), Postives = 155/338 (45.86%), Query Frame = 0


Query: 5   SSPQEVVLASSPDGLI---VAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVT 64
           ++P EVV+ +     +   V ++  +G  L  +   ++  RG+      ++  +      
Sbjct: 2   AAPMEVVVCTDAAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ----- 61

Query: 65  ASGSIHIYNWWTSSAFQC---LTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVL 124
             G  +I  W      Q    +  P PV  LT  P+G Y+ A G++  I++  + +G++L
Sbjct: 62  -QGKNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLA-GIAESIYLWEVCTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKP-RENATEHILHQFLAH 184
             L  H + VSCLK + DGS  +S G D   +   +  ++QA P R  A  H+  Q   H
Sbjct: 122 VILSRHYQDVSCLKFTGDGSHFVSAGKDCLALAWSLCSVLQADPSRILAPRHVWSQ---H 181

Query: 185 TDSVTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFF 244
           T  +T ++ G G    ++ + SLD   K W++ SG +L +V+F   I SV ++ +E   F
Sbjct: 182 TLPITDLHCGFGGPMARVATASLDQTVKLWAISSGDLLLSVLFDMGITSVTMDLAEHHIF 241

Query: 245 AAGSDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSP 304
             GSDG +++  L      R   ++   P+ +   V+K    H+N+              
Sbjct: 242 CGGSDGSIFQVDLCSWPGLR---EHSFQPEQNTGKVFK---GHRNQ-------------- 301

Query: 305 KHEAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVI 336
                V  + +  +G  L+S + D S+ +W+VK  Q +
Sbjct: 302 -----VTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCL 304

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q68EI0 (WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.1e-23
Identity = 97/383 (25.33%), Postives = 168/383 (43.86%), Query Frame = 0


Query: 5   SSPQEVVLASSPDGLI---VAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVT 64
           S+P EVVL++   G +     YD  TG+   ++    +  R +T     +I  + +    
Sbjct: 2   SAPVEVVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQL---- 61

Query: 65  ASGSIHIYNWWTSSAFQC---LTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVL 124
             G  +I  W      Q    +  P  V  L A+PDG Y+ A G++  I++  + +G++L
Sbjct: 62  --GKNYINVWEIQRKDQLQQKIVCPGIVTCLCASPDGLYVLA-GIAEAIYLWEVSTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQA-KPRENATEHILHQFLAH 184
             L  H + +SC+K + D S  +SGG D    +  +  +VQ    R     HIL +   H
Sbjct: 122 AILSRHFQDLSCIKFTDDSSHFVSGGKDNLAFIWNLSSVVQLDSSRTPEPRHILSR---H 181

Query: 185 TDSVTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFF 244
           +  +T I+ G+     ++ + SLD   K W + SG +L +V+F   I SV  +P E   F
Sbjct: 182 SLPITDIHCGLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLF 241

Query: 245 AAGSDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSP 304
             GSDG +++ SL   +             +S D  + +S    N+   G          
Sbjct: 242 CGGSDGNIFQVSLCSTS-------------LSRDKTF-QSDSEGNQVFKG---------- 301

Query: 305 KHEAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAH- 364
            H   V  + +  +G  L+S + D ++ +W+V+  Q I  + N  G +++  +    A+ 
Sbjct: 302 -HRNLVTCLSVSMDGTVLLSGSNDETVRMWDVQSKQCIWTI-NHRGPVTNAAIIPAPANM 348

Query: 365 ---GKEQCVRTDRHGREIKISER 377
                   V   R  R +  SE+
Sbjct: 362 FLSDSHPAVPLPRFSRHLNPSEQ 348

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7UZU9 (Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00860 PE=4 SV=1)

HSP 1 Score: 873 bits (2255), Expect = 0.0
Identity = 440/441 (99.77%), Postives = 440/441 (99.77%), Query Frame = 0


Query: 1   MTMPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDG IVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240
           VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG
Sbjct: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300
           SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE
Sbjct: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360

Query: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420
           CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE
Sbjct: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAEASYNQREETQ 441
           KMLELILKEAEASYNQREETQ
Sbjct: 421 KMLELILKEAEASYNQREETQ 441

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3CYC7 (Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00370 PE=4 SV=1)

HSP 1 Score: 867 bits (2241), Expect = 0.0
Identity = 438/441 (99.32%), Postives = 438/441 (99.32%), Query Frame = 0


Query: 1   MTMPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDG IVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYL AGGLSGYIHILSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLLAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240
           VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG
Sbjct: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300
           SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTS ELIPWSPKHE
Sbjct: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSSELIPWSPKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360

Query: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420
           CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE
Sbjct: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAEASYNQREETQ 441
           KMLELILKEAEASYNQREETQ
Sbjct: 421 KMLELILKEAEASYNQREETQ 441

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3BRK4 (protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo OX=3656 GN=LOC103492937 PE=4 SV=1)

HSP 1 Score: 867 bits (2241), Expect = 0.0
Identity = 438/441 (99.32%), Postives = 438/441 (99.32%), Query Frame = 0


Query: 1   MTMPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDG IVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYL AGGLSGYIHILSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLLAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240
           VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG
Sbjct: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300
           SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTS ELIPWSPKHE
Sbjct: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSSELIPWSPKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360

Query: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420
           CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE
Sbjct: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAEASYNQREETQ 441
           KMLELILKEAEASYNQREETQ
Sbjct: 421 KMLELILKEAEASYNQREETQ 441

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0L0D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083560 PE=4 SV=1)

HSP 1 Score: 823 bits (2125), Expect = 5.13e-300
Identity = 414/441 (93.88%), Postives = 427/441 (96.83%), Query Frame = 0


Query: 1   MTMPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDG IVAYDASTGT LA+FNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTHLASFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240
           VTSIYSGMGISST+IVSCSLD RCK W+LLSGTILHTVVFPCAIFSVVLEPSE EFFAAG
Sbjct: 181 VTSIYSGMGISSTQIVSCSLDGRCKLWNLLSGTILHTVVFPCAIFSVVLEPSETEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300
           SDGLVYKGSL HNNK RRGTDY+LIPQISNDLVY+RSLRHKNKHLTGTS ELIPWS KHE
Sbjct: 241 SDGLVYKGSLGHNNKRRRGTDYELIPQISNDLVYRRSLRHKNKHLTGTSSELIPWSTKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATER+HGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERSHGKEQ 360

Query: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420
           CV+TD HG  ++ISERFRLPIKMLGLSIK+TV+MQGE+ AAGSDV RAIEMLESAIAVYE
Sbjct: 361 CVKTDSHGGAMEISERFRLPIKMLGLSIKQTVEMQGEVGAAGSDVSRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAEASYNQREETQ 441
           KMLELILKEA+ASYNQREETQ
Sbjct: 421 KMLELILKEAKASYNQREETQ 441

[Close]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1E4H4 (protein ROOT INITIATION DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430540 PE=4 SV=1)

HSP 1 Score: 696 bits (1796), Expect = 5.93e-250
Identity = 354/439 (80.64%), Postives = 386/439 (87.93%), Query Frame = 0


Query: 3   MPSSPQEVVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           MP SPQEVVLASSPDG IVAYDASTGTPLA+FN SRSPRRGITRAG+S IAVSHICPVTA
Sbjct: 1   MPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSRSPRRGITRAGRSSIAVSHICPVTA 60

Query: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP 122
           SGSIHIYNWW SSAFQ +TVPEPVAPLTATPDGFYLFAGGLSG IH LSLPSGDVLNSLP
Sbjct: 61  SGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182
           AH+K VSCL+LSADGSLLISGGDDG IVVMPIFQLVQAKP+ENAT+HILHQF AHTDSVT
Sbjct: 121 AHRKSVSCLELSADGSLLISGGDDGMIVVMPIFQLVQAKPQENATKHILHQFSAHTDSVT 180

Query: 183 SIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSD 242
           SIYS MG+SS++IVS S+D RCKFWSLLSGT+LHTVVFPCAIFSVVL+PSE EFFAAG+D
Sbjct: 181 SIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCAIFSVVLDPSETEFFAAGTD 240

Query: 243 GLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHEAA 302
           GLVYK SLRHN KH   TD +L P  S+DL Y+ SLRHKNKHL GTS ELI WSPKH+AA
Sbjct: 241 GLVYKDSLRHNIKHLISTDSELTPPASDDLAYRCSLRHKNKHLMGTSSELISWSPKHDAA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCV 362
           VVSIVI+NEG +LISAAEDG+IWVW+V KGQVIM LENEMGSISDL +ATE+ H KE+ V
Sbjct: 301 VVSIVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLAIATEKRHEKERNV 360

Query: 363 RTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKM 422
           R   HGR +K  E  RLP  MLGL I +T +MQG +AA GSDVRRAIE+LESAIA+YEKM
Sbjct: 361 RRGSHGRAMK-RESSRLPSPMLGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMYEKM 420

Query: 423 LELILKEAEASYNQREETQ 441
           LELILKEA+A YNQREE Q
Sbjct: 421 LELILKEAKAGYNQREEIQ 438

[Close]

BLAST of MELO3C016114.jh1.t1 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 4.1e-38
Identity = 104/335 (31.04%), Postives = 154/335 (45.97%), Query Frame = 0


Query: 10  VVLASSPDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTASGSIHIY 69
           V+ +SS D  I ++D  TGT    F    SP  G+T  G+ F+A S +     SGSI  +
Sbjct: 5   VIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYW 64

Query: 70  NWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLPAHKKPVS 129
           +W    A       EP+  L A  +G YL  GG+SG I++  + +G +L     H + V+
Sbjct: 65  SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVT 124

Query: 130 CLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVTSIYSGMG 189
           CL  S D SLL+SG  DG+I V  + +L     R+       H F  HT SVT I    G
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYG 184

Query: 190 ISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSDGLVYKGS 249
             +  I+S S D  CK WSL  G +L  ++FP  I ++ L+P    F+A   D  +Y G+
Sbjct: 185 GCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGA 244

Query: 250 LRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHEAAVVSIVIV 309
           +   +++  GT                S+  K K                  A+  +   
Sbjct: 245 INATSEY--GTQ------------VLGSVSEKGK------------------AITCLAYC 304

Query: 310 NEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGS 345
            +G  LIS +EDG + VW+ K  + +  L +  GS
Sbjct: 305 ADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGS 307

[Close]

BLAST of MELO3C016114.jh1.t1 vs. TAIR 10
Match: AT1G58230.1 (binding )

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-08
Identity = 37/140 (26.43%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 94   DGFYLFAGGLSGYIHILSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMP 153
            + F +  G      H++SL  G V+ S+  HK  VSC+ ++AD ++L +G  D T++V  
Sbjct: 2339 ENFLVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWD 2398

Query: 154  IFQLVQAKPR-ENATEHIL-----------HQFLAHTDSVTSIYSGMGISSTKIVSCSLD 213
            I ++   + R  N    +L           H    H D +T +Y    +    ++S S D
Sbjct: 2399 ILRMRTPEKRVRNTHAEVLRKDIVIADAPSHILCGHDDIITCLYVSTDLDI--VISGSKD 2458

Query: 214  ARCKFWSLLSGTILHTVVFP 222
              C F +L  G  + ++  P
Sbjct: 2459 GTCVFHTLREGRYIRSLKHP 2476

[Close]

BLAST of MELO3C016114.jh1.t1 vs. TAIR 10
Match: AT4G15900.1 (pleiotropic regulatory locus 1 )

HSP 1 Score: 53.1 bits (126), Expect = 6.4e-07
Identity = 61/281 (21.71%), Postives = 105/281 (37.37%), Query Frame = 0


Query: 58  CPVTASGSIHIYNWWTSSAFQCLTVP-EPVAPLTATPDGFYLFAGGLSGYIHILSLPSGD 117
           C  +A  +I I++  T      LT   E V  L  +    Y+F+ G    +    L    
Sbjct: 192 CTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 251

Query: 118 VLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLA 177
           V+ S   H   V CL L     +L++GG D    V  I            T+  +     
Sbjct: 252 VIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI-----------RTKMQIFALSG 311

Query: 178 HTDSVTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVV-FPCAIFSVVLEPSEIE 237
           H ++V S+++    +  ++V+ S D   KFW L  G  + T+     ++ ++ L P E  
Sbjct: 312 HDNTVCSVFTRP--TDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA 371

Query: 238 FFAAGSDGL----VYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFE 297
           F +A +D      + KG   HN   ++ T                               
Sbjct: 372 FASASADNTKKFSLPKGEFCHNMLSQQKT------------------------------- 417

Query: 298 LIPWSPKHEAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKG 333
                      +++ + VNE   +++  ++GSIW W+ K G
Sbjct: 432 -----------IINAMAVNEDGVMVTGGDNGSIWFWDWKSG 417

[Close]

BLAST of MELO3C016114.jh1.t1 vs. TAIR 10
Match: AT1G73720.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 49.7 bits (117), Expect = 7.1e-06
Identity = 41/148 (27.70%), Postives = 62/148 (41.89%), Query Frame = 0


Query: 92  TPDGFYLFAGGLSGYIHILSLPSGDVLNSLP--------AHKKPVSCLKLSADGSLLISG 151
           +PDG +L +  + G+I +    SG +   L          H  PV C+  S D  +L SG
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281

Query: 152 GDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVTSIYSGMGISSTKIVSCSLDAR 211
             DG I +  I            T   + +F AH+  VTS+        ++++S S D  
Sbjct: 282 SQDGKIKIWRI-----------RTGVCIRRFDAHSQGVTSL--SFSRDGSQLLSTSFDQT 341

Query: 212 CKFWSLLSGTIL-----HTVVFPCAIFS 227
            +   L SG +L     HT     AIF+
Sbjct: 342 ARIHGLKSGKLLKEFRGHTSYVNHAIFT 356

[Close]

BLAST of MELO3C016114.jh1.t1 vs. TAIR 10
Match: AT5G08390.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 4.6e-05
Identity = 43/195 (22.05%), Postives = 81/195 (41.54%), Query Frame = 0


Query: 16  PDGLIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTASGSIHIYNWWTSS 75
           P+ ++  Y  S+G     F++S     G+  AG             ASG+I +++   + 
Sbjct: 49  PNAILSLYGHSSGIDSVTFDAS----EGLVAAG------------AASGTIKLWDLEEAK 108

Query: 76  AFQCLTVPEP-VAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLPAHKKPVSCLKLS 135
             + LT        +   P G +  +G L   + I  +     +++   H + V+ L+ +
Sbjct: 109 VVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT 168

Query: 136 ADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVTSIYSGMGISSTK 195
            DG  ++SGG+D    V+ ++ L   K        +LH+F +H   + S+          
Sbjct: 169 PDGRWIVSGGEDN---VVKVWDLTAGK--------LLHEFKSHEGKIQSL--DFHPHEFL 214

Query: 196 IVSCSLDARCKFWSL 210
           + + S D   KFW L
Sbjct: 229 LATGSADKTVKFWDL 214

The following BLAST results are available for this feature:

BLAST of MELO3C016114.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059059.1	0.0	99.77	protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo var. makuwa]	[more]
XP_008451730.1	0.0	99.32	PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo] >TYK16268.1 p...	[more]
KGN53581.1	1.06e-299	93.88	hypothetical protein Csa_015091 [Cucumis sativus]	[more]
XP_011654344.2	3.28e-298	93.85	protein ROOT INITIATION DEFECTIVE 3 [Cucumis sativus]	[more]
XP_038889657.1	2.64e-276	88.61	protein ROOT INITIATION DEFECTIVE 3-like [Benincasa hispida]	[more]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B4	5.8e-37	31.04	Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1...	[more]
Q499N3	2.5e-24	25.74	WD repeat-containing protein 18 OS=Rattus norvegicus OX=10116 GN=Wdr18 PE=2 SV=1	[more]
A0A1L8HX76	4.3e-24	24.12	WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1	[more]
Q4VBE8	1.6e-23	25.74	WD repeat-containing protein 18 OS=Mus musculus OX=10090 GN=Wdr18 PE=1 SV=1	[more]
Q68EI0	2.1e-23	25.33	WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1	[more]

BLAST of MELO3C016114.jh1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZU9	0.0	99.77	Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CYC7	0.0	99.32	Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BRK4	0.0	99.32	protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo OX=3656 GN=LOC103492937...	[more]
A0A0A0L0D5	5.13e-300	93.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083560 PE=4 SV=1	[more]
A0A6J1E4H4	5.93e-250	80.64	protein ROOT INITIATION DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of MELO3C016114.jh1.t1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49180.1	4.1e-38	31.04	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G58230.1	1.5e-08	26.43	binding	[more]
AT4G15900.1	6.4e-07	21.71	pleiotropic regulatory locus 1	[more]
AT1G73720.1	7.1e-06	27.70	transducin family protein / WD-40 repeat family protein	[more]
AT5G08390.1	4.6e-05	22.05	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 409..429
None	No IPR available	PANTHER	PTHR18763	WD-REPEAT PROTEIN 18	coord: 3..439
None	No IPR available	PANTHER	PTHR18763:SF3	OS09G0477800 PROTEIN	coord: 3..439
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 121..151 score: 8.65015
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 296..333 score: 9.335602
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 73..111 e-value: 180.0 score: 2.7 coord: 114..153 e-value: 4.2E-6 score: 36.3 coord: 289..328 e-value: 0.018 score: 24.2 coord: 167..208 e-value: 0.028 score: 23.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 117..151 e-value: 5.4E-6 score: 27.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 121..151 score: 10.274523
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 296..337 score: 12.313033
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 267..404 e-value: 1.1E-6 score: 30.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 3..165 e-value: 3.7E-19 score: 70.6
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 166..256 e-value: 1.2E-7 score: 32.8
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 315..329
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 10..341

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C016114.jh1	MELO3C016114.jh1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016114.jh1.t1.exon	MELO3C016114.jh1.t1.exon	exon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016114.jh1.t1.start_codon	MELO3C016114.jh1.t1.start_codon	start_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016114.jh1.t1.cds	MELO3C016114.jh1.t1.cds	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016114.jh1.t1.stop_codon	MELO3C016114.jh1.t1.stop_codon	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C016114.jh1.t1	MELO3C016114.jh1.t1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding