Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGCATCGACATAGATTGGAAATACATCGAGGAAGGTTTACCCGACGTATAAAGCGACGTCGGAAAGAGTTTCGGGATAAACACGTCAGAAGAACTATTCATGACGTGCAACCAGCACGATGTCGCGAATATACGTCTCCTAATGTCTCTGTGGCTAACGTTGATACATTGTTAGGAAAACACAATCCCCAATGTCCTCCACAGGTGTTAAGAAAAGGTATTTCTCGATGCAACGTCGAAAACACTTATCCCAATGCTTTTGAACCAACGTTGGGAAAAG mRNA sequence ATGCATCGACATAGATTGGAAATACATCGAGGAAGGTTTACCCGACGTATAAAGCGACGTCGGAAAGAGTTTCGGGATAAACACGTCAGAAGAACTATTCATGACGTGCAACCAGCACGATGTCGCGAATATACGTCTCCTAATGTCTCTGTGGCTAACGTTGATACATTGTTAGGAAAACACAATCCCCAATGTCCTCCACAGGTGTTAAGAAAAGGTATTTCTCGATGCAACGTCGAAAACACTTATCCCAATGCTTTTGAACCAACGTTGGGAAAAG Coding sequence (CDS) ATGCATCGACATAGATTGGAAATACATCGAGGAAGGTTTACCCGACGTATAAAGCGACGTCGGAAAGAGTTTCGGGATAAACACGTCAGAAGAACTATTCATGACGTGCAACCAGCACGATGTCGCGAATATACGTCTCCTAATGTCTCTGTGGCTAACGTTGATACATTGTTAGGAAAACACAATCCCCAATGTCCTCCACAGGTGTTAAGAAAAGGTATTTCTCGATGCAACGTCGAAAACACTTATCCCAATGCTTTTGAACCAACGTTGGGAAAA Protein sequence MHRHRLEIHRGRFTRRIKRRRKEFRDKHVRRTIHDVQPARCREYTSPNVSVANVDTLLGKHNPQCPPQVLRKGISRCNVENTYPNAFEPTLGK
Homology
BLAST of MELO3C010438.1 vs. NCBI nr
Match: TYK01806.1 (hypothetical protein E5676_scaffold113G00390 [Cucumis melo var. makuwa]) HSP 1 Score: 54.3 bits (129), Expect = 6.5e-04 Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0
Query: 6 LEIHRGRFTRRIKRRRKEFRDKHVRRTIHDVQPARCREYTSPNVSVANVDTLLGKHNPQ 65
LE G+ K +K+VRRTI DVQPAR REYTSPN++VA+ DT KH+PQ
Sbjct: 47 LETVSGKAPPTYKMTSGRMSEKYVRRTIFDVQPARHREYTSPNIAVADDDTTSKKHDPQ 105
BLAST of MELO3C010438.1 vs. ExPASy TrEMBL
Match: A0A5D3BU97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00390 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.2e-04 Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0
Query: 6 LEIHRGRFTRRIKRRRKEFRDKHVRRTIHDVQPARCREYTSPNVSVANVDTLLGKHNPQ 65
LE G+ K +K+VRRTI DVQPAR REYTSPN++VA+ DT KH+PQ
Sbjct: 47 LETVSGKAPPTYKMTSGRMSEKYVRRTIFDVQPARHREYTSPNIAVADDDTTSKKHDPQ 105
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK01806.1 | 6.5e-04 | 52.54 | hypothetical protein E5676_scaffold113G00390 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BU97 | 3.2e-04 | 52.54 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C010438.1:exon:205160 | MELO3C010438.1:exon:205160 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C010438.1:three_prime_utr | MELO3C010438.1:three_prime_utr | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C010438.1:cds | MELO3C010438.1:cds | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C010438.1 | MELO3C010438.1-protein | polypeptide |
|
