MELO3C009852.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C009852.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Vesicle transport v-SNARE family protein
Location	chr04: 27612351 .. 27614664 (+)
Sequence length	854
RNA-Seq Expression	MELO3C009852.1
Synteny	MELO3C009852.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAATTCTCTCTTTTCCCGAAGTCAAGTTCAACACACGCTTGCTTCCATTTTTGCTCGTTCCATTTCCGCCACACCGACCTACTTCCCCGGCAATATCTCCAACTTTTTCCGACCTTTCCGACCACCATCCATATAAGGTTTGTTCTCTTAATTATGTGCAGTGCAAAAGAAAAAGCTTTTTCAGCTTTATCAAATTTTCTTTATCTTCTTCGTCTATCCATTGAATTCTAAGACAATCACTAACCTCAACACTTGCACTCTGGAATTCTCTAAGCTCCGGACACCATGAGCGAGGTATTCGAAAGATACGAGCGTCAATACTGCGAACTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCACTGCCCTAGACGGAGGTATCAGTTATCACCCTCCAATTCTTCTTGTCTTCGTTTTTGTCTTACAATATGTGTTGAATACTATGATTTTCTTTCTAATTCTTCAGAGCAGAAGAAGCAAAAGCTTTCTGAAATAAAAGGTGGTATTGATGAAGCCGAGTCTCTGGTACTTGTACAAGTTATTGGCACTGATTGAATTGGAATTTTAAACTAAATTATTGGATTTGACTTAAAGTTTATTGCAATTTTTTAGATTCGGAAAATGGATCTCGATGCGAGGAGTTTGCAGCCCAGTGTTAAAATTGTTCTTCTTGCTAGGCTAAGGGAATATAAATCAGATTTGAACAATCTGAAAAGTGAAGTAAAACGGATTACGTCTGGCAATGTAAATGCAACTGCGCGCGATGAGTTGCTGGAATCTGGATTGGCTGATACCCTCAATGTATGGATTTATTTAGTTGCTTGACCTCTTACAAATTGTTTTCATATGCAGGGACGTGATTAATCCTACATCCTGGAAAATGCATTGATTCTTAAAATATTTGAAGCTGTTTAGTTGTTTGTGTGTGAATAAATTTATGTGACTTTTTGTTTAACGGAGTTCAAGAAACCATTAGCGGTATAAGCTTCTGACAATTGTTCAAATCATTACTTGTTAGTTGTAGTTCTGCTCATCCATCAAGAATTGAAAACTTGGTCAAGCGATATATTGGTTGACTGTTGCTTGTAGACTTGTAGTTGTTTGGGAAAGTCTGCGCGATTAGAAGTTATTGAGATAAGGTGTGTGTCGAGAAAGCTGGAGTGAAAAAGTTTATTGAGAGAATAGTTATTAGGAGAAAGCATGTGGAGTGTAATTAAAGAAAAGAAATGTGTTATGAGAGGTTGAGTATGAAGTGTTTAAGTAAATTGCATTTGATAAGCCACTCATCAATTGTTTCTTTAAAAGCACTTCTTTAAGCTTTAGCTTTTTAAAAGTGCTTATAAATTGTAGTGAATGGTAGAATAATAGGCAGTTCTTTTAACCAGTTAAAAGTATTTATGTCATGACTCAAAACATTCTCAAATATAGCCAGTTTAGGAATTATTTTTACTTGTTAGCATCTACTGATTTGATTACTTATGTTTTTGGGAGGAGTTTGCTAAAAGGTGGATTTATGCGCTAATATTTTAGTTTTTGTATCTGTTTGCTTTATCTTCCCTTCCTCTCTGGATTTATGGAGCAATCTTCTAATGGCGATGAGGATGAAACATAATCTTTAGGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACGGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCCATCCTGGAAGACTTGCATTCACAGAGACAATCACTTTTGGGTGCTCATGACACGGTAATCCTTTTCATTATGCTGGAAACGGTGAATAAATCTTGCTTTAGTTAGTTTCCTTGTCTTTCCTTTTGTAGTTACTCTCCCTCATCCTTAAATATTTTTTCTGCTTTCAGCATTTCATTAGCCTTAAACACTTTTTCGACTGCCATTTTGACACCAGTTTCAATATTTTTCCTCTTCCCTTAGTTGCAATTCTGTAGTTTGTTTTTCTTATTGAAATTTGGGAAATTTAAAAAATATATCTTCCTTCACCTTAATTTTCGTCAGCACCGAAATGAATATAACAGAATTATGTAATTGTTCCTTTTAAAATCTTTGTCTGTTTGCAGCTTCATGGTGTGGATGATAACGTAGGCAGAAGCAAAAGAATTTTAACCAATATGACAAGGAGGATGAACAAAAATAAGTGGACAATTTCCTGCATGCTTACTGTTCTTGTTATTGCCATCATTGCGATCTTATACTTCAAACTTAAATAGGTAAATACATTCCTTCCTTGTACAAAGTTGACTTCCCCC

mRNA sequence

AAATTAATTCTCTCTTTTCCCGAAGTCAAGTTCAACACACGCTTGCTTCCATTTTTGCTCGTTCCATTTCCGCCACACCGACCTACTTCCCCGGCAATATCTCCAACTTTTTCCGACCTTTCCGACCACCATCCATATAAGCTCCGGACACCATGAGCGAGGTATTCGAAAGATACGAGCGTCAATACTGCGAACTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCACTGCCCTAGACGGAGAGCAGAAGAAGCAAAAGCTTTCTGAAATAAAAGGTGGTATTGATGAAGCCGAGTCTCTGATTCGGAAAATGGATCTCGATGCGAGGAGTTTGCAGCCCAGTGTTAAAATTGTTCTTCTTGCTAGGCTAAGGGAATATAAATCAGATTTGAACAATCTGAAAAGTGAAGTAAAACGGATTACGTCTGGCAATGTAAATGCAACTGCGCGCGATGAGTTGCTGGAATCTGGATTGGCTGATACCCTCAATGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACGGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCCATCCTGGAAGACTTGCATTCACAGAGACAATCACTTTTGGGTGCTCATGACACGCTTCATGGTGTGGATGATAACGTAGGCAGAAGCAAAAGAATTTTAACCAATATGACAAGGAGGATGAACAAAAATAAGTGGACAATTTCCTGCATGCTTACTGTTCTTGTTATTGCCATCATTGCGATCTTATACTTCAAACTTAAATAGGTAAATACATTCCTTCCTTGTACAAAGTTGACTTCCCCC

Coding sequence (CDS)

ATGAGCGAGGTATTCGAAAGATACGAGCGTCAATACTGCGAACTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCACTGCCCTAGACGGAGAGCAGAAGAAGCAAAAGCTTTCTGAAATAAAAGGTGGTATTGATGAAGCCGAGTCTCTGATTCGGAAAATGGATCTCGATGCGAGGAGTTTGCAGCCCAGTGTTAAAATTGTTCTTCTTGCTAGGCTAAGGGAATATAAATCAGATTTGAACAATCTGAAAAGTGAAGTAAAACGGATTACGTCTGGCAATGTAAATGCAACTGCGCGCGATGAGTTGCTGGAATCTGGATTGGCTGATACCCTCAATGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACGGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCCATCCTGGAAGACTTGCATTCACAGAGACAATCACTTTTGGGTGCTCATGACACGCTTCATGGTGTGGATGATAACGTAGGCAGAAGCAAAAGAATTTTAACCAATATGACAAGGAGGATGAACAAAAATAAGTGGACAATTTCCTGCATGCTTACTGTTCTTGTTATTGCCATCATTGCGATCTTATACTTCAAACTTAAATAG

Protein sequence

MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDARSLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK

Homology

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BLAST of MELO3C009852.1 vs. NCBI nr
Match: XP_008443391.1 (PREDICTED: vesicle transport v-SNARE 13-like [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 8.5e-111
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR
Sbjct: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG
Sbjct: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 220

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BLAST of MELO3C009852.1 vs. NCBI nr
Match: XP_004136695.1 (vesicle transport v-SNARE 13 [Cucumis sativus] >XP_011652229.1 vesicle transport v-SNARE 13 [Cucumis sativus] >KGN59550.1 hypothetical protein Csa_002122 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 7.0e-105
Identity = 209/220 (95.00%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFERYERQYCELSANL RKCTS+TALDGEQKKQKLSEIKGG+DEAESLIRKM+LDAR
Sbjct: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVKI LLA+LREYKSDLNNLKSEVKRIT GNVNATARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMS RIKDSQR MLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG
Sbjct: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           RSKRILTNMTRRMNKNKWTISC+LTVLVIAII ILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 220

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BLAST of MELO3C009852.1 vs. NCBI nr
Match: XP_038905553.1 (vesicle transport v-SNARE 13-like isoform X1 [Benincasa hispida])

HSP 1 Score: 375.6 bits (963), Expect = 3.0e-100
Identity = 200/220 (90.91%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFE YERQYCELSANLSRKC+SA+ALDGEQKKQKLSEIK GIDEAESLIRKM+LDAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCSSASALDGEQKKQKLSEIKSGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVK VLLA+LREYKSDLNNLKSEV+RI  GN+NA ARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKAVLLAKLREYKSDLNNLKSEVQRINFGNLNAAARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMS+RIKDSQRTMLETEDLGVSILEDLHSQRQSLL AHDTLHGVDDN+G
Sbjct: 121 TRLMTTTERLGNMSNRIKDSQRTMLETEDLGVSILEDLHSQRQSLLHAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           RSKRILTNMTRRMNKNKWTISC++T LV AII ILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCIVTALVFAIILILYFKLK 220

[Close]

BLAST of MELO3C009852.1 vs. NCBI nr
Match: XP_022144558.1 (vesicle transport v-SNARE 11-like [Momordica charantia] >XP_022144560.1 vesicle transport v-SNARE 11-like [Momordica charantia])

HSP 1 Score: 364.8 bits (935), Expect = 5.3e-97
Identity = 193/220 (87.73%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFE YERQYCELSA+LSRKCTSA  L+GEQKKQKLSEIKGGIDEAESLIRKMDLDAR
Sbjct: 1   MSEVFEGYERQYCELSASLSRKCTSAGGLEGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVK +LLA+LREYKSDLNNLKSEVKRI+SGN+NA ARDELLESGLADTL  SADQR
Sbjct: 61  SLQPSVKGILLAKLREYKSDLNNLKSEVKRISSGNLNAAARDELLESGLADTLTASADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLG  SDRIKDS+RTMLETEDLGVSIL+DLHSQRQSLL AHDTLHGVDDN+G
Sbjct: 121 TRLMTTTERLGKTSDRIKDSRRTMLETEDLGVSILQDLHSQRQSLLHAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           +SKRILTN++RRMNKNKWTI+C++ VLVIAII ILYFKLK
Sbjct: 181 KSKRILTNVSRRMNKNKWTIACIVAVLVIAIIVILYFKLK 220

[Close]

BLAST of MELO3C009852.1 vs. NCBI nr
Match: XP_023528169.1 (vesicle transport v-SNARE 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFE YERQYCELSANL RKCTSA+ALDGEQKKQ LSEI GGIDEAESLIRKM+LDAR
Sbjct: 1   MSEVFEGYERQYCELSANLFRKCTSASALDGEQKKQTLSEITGGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           +LQPSVK  LLA+LREYKSDLNNLK EVKRIT GN+NA AR+ELLESGLADT+ VSADQR
Sbjct: 61  TLQPSVKANLLAKLREYKSDLNNLKREVKRITFGNLNAAARNELLESGLADTIAVSADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLM+TTERLG  SDRIKDSQRTMLETEDLGVSILEDLHSQRQ LL AHDTLHGVDDN+G
Sbjct: 121 TRLMSTTERLGKSSDRIKDSQRTMLETEDLGVSILEDLHSQRQPLLRAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           RSKRILTNM+RRMNKNKWTI+C+ TVLVIAII ILYFKLK
Sbjct: 181 RSKRILTNMSRRMNKNKWTIACIGTVLVIAIIVILYFKLK 220

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BLAST of MELO3C009852.1 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.6e-88
Identity = 167/219 (76.26%), Postives = 198/219 (90.41%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MS+ FERYERQYCE+SANLS+KCTSA ALDGEQKKQ LSEIK G++EAE+L++KMDL+AR
Sbjct: 1   MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           +L P+VK  LL +LREYKSDLNN K+EVKRITSGN+NATARDELLE+G+ADTL  SADQR
Sbjct: 61  NLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           +RLM +T+ LG  +DRIKDS+RT+LETE+LGVSIL+DLH QRQSLL AH+TLHGVDDNVG
Sbjct: 121 SRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKL 220
           +SK+ILT MTRRMN+NKWTI  ++TVLV+AII ILYFKL
Sbjct: 181 KSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 219

[Close]

BLAST of MELO3C009852.1 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2)

HSP 1 Score: 308.5 bits (789), Expect = 6.0e-83
Identity = 157/219 (71.69%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MS+VF+ YERQYCELSA+LS+KC+SA +LDGEQKKQKLSEIK G++ AE LIRKMDL+AR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           +L P++K  LL +LRE+KSDLNN K+EVKRITSG +NA ARDELLE+G+ADT   SADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
            RLM +TERLG  +DR+KDS+RTM+ETE++GVSIL+DLH QRQSLL AH+TLHGVDDN+G
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKL 220
           +SK+ILT+MTRRMNKNKWTI  ++  L+ AI  ILYFKL
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKL 219

[Close]

BLAST of MELO3C009852.1 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3)

HSP 1 Score: 256.5 bits (654), Expect = 2.7e-67
Identity = 136/220 (61.82%), Postives = 177/220 (80.45%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATAL-DGEQKKQKLSEIKGGIDEAESLIRKMDLDA 60
           MS+VFE YERQYCELS NLSRKC SA+ L +GE+KK K++EIK GIDEA+ LIRKMDL+A
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQ 120
           RSLQPS K V L++LREYKSDLN LK E KR++S +   ++R+EL+ESG+AD   VSADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNV 180
           R RL  + ERL   SDRI++S+R MLETE++G+SI++DL  QRQ+LL AH+ LHGVDD +
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 181 GRSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKL 220
            +SK++LT M+RRM +NKW I+ ++  LV+AII I+ +KL
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKL 220

[Close]

BLAST of MELO3C009852.1 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.7e-25
Identity = 72/220 (32.73%), Postives = 121/220 (55.00%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MS  FE YE+ +  L+A ++ K      L  ++KKQ ++ ++  ++EA  L+ +MDL+ R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
            + P  + +   R+R YK ++  L+++ KR           DE+    L D  N S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDAGNSSENQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
             L+  TERL   S R++   +  +ETE +G  +LE+L   R+ +  A D L   D N+G
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANLG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           +S RILT M RR+ +N+  +  +  ++VIAI+  + F +K
Sbjct: 181 KSSRILTGMLRRIIQNRILLVILGIIVVIAILTAIAFFVK 215

[Close]

BLAST of MELO3C009852.1 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23
Identity = 69/220 (31.36%), Postives = 121/220 (55.00%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MS  FE YE+ +  L+A ++ K      L  ++KKQ ++ ++  ++EA+ L+ +MDL+ R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
            + P  + +   R+R YK ++  L+++ KR           DE+    L D  N S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDDGNSSENQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
             L+  TERL   S R++   +  +ETE +G  +LE+L   R+ +  A + L   D N+G
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           +S RILT M RR+ +N+  +  +  ++VI I+  + F ++
Sbjct: 181 KSSRILTGMLRRIIQNRILLVILGIIVVITILMAITFSVR 215

[Close]

BLAST of MELO3C009852.1 vs. ExPASy TrEMBL
Match: A0A1S3B8M5 (vesicle transport v-SNARE 13-like OS=Cucumis melo OX=3656 GN=LOC103486987 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.1e-111
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR
Sbjct: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG
Sbjct: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 220

[Close]

BLAST of MELO3C009852.1 vs. ExPASy TrEMBL
Match: A0A0A0LC29 (V-SNARE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824950 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.4e-105
Identity = 209/220 (95.00%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFERYERQYCELSANL RKCTS+TALDGEQKKQKLSEIKGG+DEAESLIRKM+LDAR
Sbjct: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVKI LLA+LREYKSDLNNLKSEVKRIT GNVNATARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMS RIKDSQR MLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG
Sbjct: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           RSKRILTNMTRRMNKNKWTISC+LTVLVIAII ILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 220

[Close]

BLAST of MELO3C009852.1 vs. ExPASy TrEMBL
Match: A0A6J1CTL4 (vesicle transport v-SNARE 11-like OS=Momordica charantia OX=3673 GN=LOC111014211 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.6e-97
Identity = 193/220 (87.73%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFE YERQYCELSA+LSRKCTSA  L+GEQKKQKLSEIKGGIDEAESLIRKMDLDAR
Sbjct: 1   MSEVFEGYERQYCELSASLSRKCTSAGGLEGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVK +LLA+LREYKSDLNNLKSEVKRI+SGN+NA ARDELLESGLADTL  SADQR
Sbjct: 61  SLQPSVKGILLAKLREYKSDLNNLKSEVKRISSGNLNAAARDELLESGLADTLTASADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLG  SDRIKDS+RTMLETEDLGVSIL+DLHSQRQSLL AHDTLHGVDDN+G
Sbjct: 121 TRLMTTTERLGKTSDRIKDSRRTMLETEDLGVSILQDLHSQRQSLLHAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           +SKRILTN++RRMNKNKWTI+C++ VLVIAII ILYFKLK
Sbjct: 181 KSKRILTNVSRRMNKNKWTIACIVAVLVIAIIVILYFKLK 220

[Close]

BLAST of MELO3C009852.1 vs. ExPASy TrEMBL
Match: A0A6J1J747 (vesicle transport v-SNARE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111482354 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFE YERQYCELSANL RKCTSA+ALDGEQKKQ LSEI GGIDEAESLIRKM+LDAR
Sbjct: 1   MSEVFEGYERQYCELSANLFRKCTSASALDGEQKKQTLSEITGGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           +LQPSVK  LLA+LREYKSDLNNLK EVKRIT GN+NA AR+ELLESGLADT+ VSADQR
Sbjct: 61  TLQPSVKANLLAKLREYKSDLNNLKREVKRITFGNLNAAARNELLESGLADTIAVSADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLM+TTERLG  SDRIKDSQRTMLETEDLGVSILEDLHSQRQ LL AHDTLHGVDDN+G
Sbjct: 121 TRLMSTTERLGKSSDRIKDSQRTMLETEDLGVSILEDLHSQRQPLLRAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           RSKRILTNM+RRMNKNKWTI+C+ T+LVIAII ILYFKLK
Sbjct: 181 RSKRILTNMSRRMNKNKWTIACIGTLLVIAIIVILYFKLK 220

[Close]

BLAST of MELO3C009852.1 vs. ExPASy TrEMBL
Match: A0A6J1F9S4 (vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111442118 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.6e-94
Identity = 191/220 (86.82%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MSEVFE YERQYCELSANL RKCTSA+ALDGEQKKQ LSEI GGIDEAESLIRKM+LDAR
Sbjct: 1   MSEVFEGYERQYCELSANLFRKCTSASALDGEQKKQTLSEITGGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           +LQPSVK  LLA+LREYKSDLNNLK EVKRIT GN+NA AR+ELLESGLADT+ VSADQR
Sbjct: 61  TLQPSVKANLLAKLREYKSDLNNLKREVKRITFGNLNAAARNELLESGLADTIAVSADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLM+TTERLG  SDRIKDSQRTMLETEDLGVSILEDLHSQRQ LL AHDTLHGVDDN+G
Sbjct: 121 TRLMSTTERLGKSSDRIKDSQRTMLETEDLGVSILEDLHSQRQPLLRAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 221
           RSKRILTNM+RRMNK KWTI+C+ TVLVIAII ILYFKLK
Sbjct: 181 RSKRILTNMSRRMNKYKWTIACIGTVLVIAIIVILYFKLK 220

[Close]

BLAST of MELO3C009852.1 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 308.5 bits (789), Expect = 4.2e-84
Identity = 157/219 (71.69%), Postives = 191/219 (87.21%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MS+VF+ YERQYCELSA+LS+KC+SA +LDGEQKKQKLSEIK G++ AE LIRKMDL+AR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           +L P++K  LL +LRE+KSDLNN K+EVKRITSG +NA ARDELLE+G+ADT   SADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
            RLM +TERLG  +DR+KDS+RTM+ETE++GVSIL+DLH QRQSLL AH+TLHGVDDN+G
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKL 220
           +SK+ILT+MTRRMNKNKWTI  ++  L+ AI  ILYFKL
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKL 219

[Close]

BLAST of MELO3C009852.1 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-68
Identity = 136/220 (61.82%), Postives = 177/220 (80.45%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATAL-DGEQKKQKLSEIKGGIDEAESLIRKMDLDA 60
           MS+VFE YERQYCELS NLSRKC SA+ L +GE+KK K++EIK GIDEA+ LIRKMDL+A
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQ 120
           RSLQPS K V L++LREYKSDLN LK E KR++S +   ++R+EL+ESG+AD   VSADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNV 180
           R RL  + ERL   SDRI++S+R MLETE++G+SI++DL  QRQ+LL AH+ LHGVDD +
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 181 GRSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKL 220
            +SK++LT M+RRM +NKW I+ ++  LV+AII I+ +KL
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKL 220

[Close]

BLAST of MELO3C009852.1 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 )

HSP 1 Score: 245.0 bits (624), Expect = 5.7e-65
Identity = 126/168 (75.00%), Postives = 151/168 (89.88%), Query Frame = 0


Query: 52  IRKMDLDARSLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLAD 111
           ++KMDL+AR+L P+VK  LL +LREYKSDLNN K+EVKRITSGN+NATARDELLE+G+AD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 112 TLNVSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDT 171
           TL  SADQR+RLM +T+ LG  +DRIKDS+RT+LETE+LGVSIL+DLH QRQSLL AH+T
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145

Query: 172 LHGVDDNVGRSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKL 220
           LHGVDDNVG+SK+ILT MTRRMN+NKWTI  ++TVLV+AII ILYFKL
Sbjct: 146 LHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 193

[Close]

BLAST of MELO3C009852.1 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 )

HSP 1 Score: 241.5 bits (615), Expect = 6.3e-64
Identity = 125/165 (75.76%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 55  MDLDARSLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLN 114
           MDL+AR+L P+VK  LL +LREYKSDLNN K+EVKRITSGN+NATARDELLE+G+ADTL 
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 115 VSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHG 174
            SADQR+RLM +T+ LG  +DRIKDS+RT+LETE+LGVSIL+DLH QRQSLL AH+TLHG
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHG 120

Query: 175 VDDNVGRSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKL 220
           VDDNVG+SK+ILT MTRRMN+NKWTI  ++TVLV+AII ILYFKL
Sbjct: 121 VDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 165

[Close]

BLAST of MELO3C009852.1 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 164.9 bits (416), Expect = 7.6e-41
Identity = 93/189 (49.21%), Postives = 131/189 (69.31%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60
           MS VF  Y++QY ELS NLS+KC+ A +L G +KK+KLSEI   ++ AE LI KMD  A 
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEKLSEITYDLENAEKLISKMDHAAS 60

Query: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120
           +L P++K +LL +L+E KS L  L++E+KR TS N+  T R+E+LE+  AD     ADQR
Sbjct: 61  NLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           +RLM +TE L    + IKDSQR +LETE++G+SILE+L  Q++SL  +   LH +DD V 
Sbjct: 121 SRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESLQNSQAMLHEIDDTVK 180

Query: 181 RSKRILTNM 190
            S+ I+ ++
Sbjct: 181 ESRSIVRSI 185

The following BLAST results are available for this feature:

BLAST of MELO3C009852.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443391.1	8.5e-111	100.00	PREDICTED: vesicle transport v-SNARE 13-like [Cucumis melo]	[more]
XP_004136695.1	7.0e-105	95.00	vesicle transport v-SNARE 13 [Cucumis sativus] >XP_011652229.1 vesicle transport...	[more]
XP_038905553.1	3.0e-100	90.91	vesicle transport v-SNARE 13-like isoform X1 [Benincasa hispida]	[more]
XP_022144558.1	5.3e-97	87.73	vesicle transport v-SNARE 11-like [Momordica charantia] >XP_022144560.1 vesicle ...	[more]
XP_023528169.1	1.1e-94	87.27	vesicle transport v-SNARE 13-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C009852.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVP9	3.6e-88	76.26	Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1	[more]
Q9SEL6	6.0e-83	71.69	Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2	[more]
Q9SEL5	2.7e-67	61.82	Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3	[more]
O89116	9.7e-25	32.73	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus O...	[more]
Q96AJ9	1.4e-23	31.36	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens O...	[more]

BLAST of MELO3C009852.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8M5	4.1e-111	100.00	vesicle transport v-SNARE 13-like OS=Cucumis melo OX=3656 GN=LOC103486987 PE=3 S...	[more]
A0A0A0LC29	3.4e-105	95.00	V-SNARE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824950 PE=...	[more]
A0A6J1CTL4	2.6e-97	87.73	vesicle transport v-SNARE 11-like OS=Momordica charantia OX=3673 GN=LOC111014211...	[more]
A0A6J1J747	1.2e-94	86.82	vesicle transport v-SNARE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111482354 PE...	[more]
A0A6J1F9S4	4.6e-94	86.82	vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111442118 ...	[more]

BLAST of MELO3C009852.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39510.1	4.2e-84	71.69	Vesicle transport v-SNARE family protein	[more]
AT1G26670.1	1.9e-68	61.82	Vesicle transport v-SNARE family protein	[more]
AT3G29100.1	5.7e-65	75.00	vesicle transport V-snare 13	[more]
AT3G29100.2	6.3e-64	75.76	vesicle transport V-snare 13	[more]
AT5G39630.1	7.6e-41	49.21	Vesicle transport v-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..94
None	No IPR available	GENE3D	1.20.5.110		coord: 117..197 e-value: 1.4E-24 score: 88.1
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 128..193 e-value: 7.6E-23 score: 80.6
None	No IPR available	PANTHER	PTHR21230:SF67	VESICLE TRANSPORT V-SNARE 13-LIKE	coord: 1..219
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 1..219
None	No IPR available	CDD	cd15862	SNARE_Vti1	coord: 127..188 e-value: 1.13437E-20 score: 79.8804
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 131..189
IPR027027	GOSR2/Membrin/Bos1	PIRSF	PIRSF028865	Membrin-2	coord: 1..218 e-value: 2.2E-13 score: 48.5
IPR038407	Vesicle transport v-SNARE, N-terminal domain superfamily	GENE3D	1.20.58.400		coord: 1..98 e-value: 5.4E-32 score: 112.0
IPR007705	Vesicle transport v-SNARE, N-terminal	PFAM	PF05008	V-SNARE	coord: 12..90 e-value: 3.1E-23 score: 81.9
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 6..93

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C009852	MELO3C009852	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009852.1:exon:122711	MELO3C009852.1:exon:122711	exon
MELO3C009852.1:exon:122712	MELO3C009852.1:exon:122712	exon
MELO3C009852.1:exon:122713	MELO3C009852.1:exon:122713	exon
MELO3C009852.1:exon:122714	MELO3C009852.1:exon:122714	exon
MELO3C009852.1:exon:122715	MELO3C009852.1:exon:122715	exon
MELO3C009852.1:exon:122716	MELO3C009852.1:exon:122716	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009852.1:five_prime_utr	MELO3C009852.1:five_prime_utr	five_prime_UTR
MELO3C009852.1:five_prime_utr	MELO3C009852.1:five_prime_utr_2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009852.1:cds	MELO3C009852.1:cds	CDS
MELO3C009852.1:cds	MELO3C009852.1:cds_2	CDS
MELO3C009852.1:cds	MELO3C009852.1:cds_3	CDS
MELO3C009852.1:cds	MELO3C009852.1:cds_4	CDS
MELO3C009852.1:cds	MELO3C009852.1:cds_5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009852.1:three_prime_utr	MELO3C009852.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C009852.1	MELO3C009852.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity