MELO3C009352.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C009352.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transcription initiation factor TFIID subunit 8
Location	chr04: 31481357 .. 31483951 (+)
Sequence length	1705
RNA-Seq Expression	MELO3C009352.1
Synteny	MELO3C009352.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTAAGTTATTAGATGAGTTGATAATTTATTTTAAGTACAACCATTAGGGCAGGTAAATTCGAAGCGTTGATAGTTTTGTTGGCGCAAAACACGAAAATGTATGATCCCAAGATTCTTTTTTTGGTTAATATACACTTATTTCTTGAACAAAATTATCTTCCCCCTTCCGTTGTCAAGCACAAAAATTATTATTTTTAGTTCTTAATTTCCTTTTTCTTCTTTCTCATCCCTTTACCGTAGACGGCCGTCGGTAATTGCTCTCCCGTTTTGATCGCTTTCGTAGAATATTCGAAGCTTTTGGCGTTGCAGATTATTGGGTTTCTTGATTCCATCTCAGGTATTTTCAGTGTAGTGTACATATTCGATTCGCTTGTTGATTTTGTGGAGTTTTTTTTTATTTTTTATTTTTTTCACTTGACCATGGGTGCAGTTCGAAATCCTAAATCGTTTCCGATGATCTAATAACGGAGTGGAGATTATTAGAGTAGTTGTCTTCGATTGTCTGCTTGTAATTTGGTTACTGATCGTTCTTCTGGTTTAATTTAGGGTTAAACGATTTGAATTAGTTGGGCATTCTCAGCTATCTGACAGTGATGAATTTTTAGTCCGAAGTTTGACCGATTCCTATATTTTACTGAGTAGCTGTAACTTTTTTTTATCGGTCAGGACTTTGATTGAATTGCTGCAATTAGGTTTTGTTAGCATTTTTGTGCTAAAGGATTTGGATAAAAAGGGATGCTAGCAAGTCTATCTATATATGAGAAATCTTGATTTCTGTTGCAATGGTCGTAGTTATACCTTTTCTAGTTTATTTTATTTGATGATCTATGAATTAACGAACTCAAGAAGCTACTCTTTATGTTTTACTTTTACTTTATAATTTTTGGGAGTATGTGTAGCCCTGCGGAAAGCTCTACCATCGTTAACAATTTTCTGGTGTTTCTCCTGATGGTATACGTGATTATGATTAGATTGGATAAAGACATCCTGTCTACAAGTGGGATTCTTTTCGTATAGTTTATCTCCTTTCAAAAAAATTTCTATACGAAAATCTCTGATTCTGAAATGATCTCCCGTTGTTGCAGTTGGGTCTCTGATGCTCAAAGGCATCATTTGGAAGTTGATGAAGGACAAGAGTAAATAGTTATTTGAAAAGTATAAAACACAGACAGATTTAATTGTCTCCTCCAACTCTGAGGCACGTCTTCGTTCTCGGAATTTCTCTTCTCGGGTTTCAGATTTCAAATTGCCCTCTGTAATTCAACCCACCGTTACCTTGGGGAATTAAAGAAGAATTGAAATGCTGACAAAATTCGAAGAAAACTGAAATGCAGAGGCAATGAGGGATGGAGTTGGTAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGGAAATGCAGAGGCAATGAGTTTGGTCGAGAGGTGTCCAAAATTGCTGTGGCTCAAATGTGTAACAGTGTAGGGTTTCAAAGCTTTAAGGAGTCTGCTCTAGACACACTGGCCGACATTGCCATTAAATACCTTCATCAGTTAGGGAAGATTGCAACATTTTATGCTAATTTAGCTGGTAGAATAGAGTGCAATGTCTTTGATATAATCAGAGGGCTGGAAGAGTTGGAATCATCACAAGGGTTTCTGGGTGCTTGGCAATCAGATCATTGTCTTGCCAAATCGGGGTCAGTGAAAAACATTGTTTGCTATGTGAATTCTGTTCAAGAGATCCCTTTCGCTCATCCACTACCATGTTTCCCTGTGATCAGAAAAAGGGAGTCAATTCCTACCTTTGTTCAGATCGGTGAAACCCCACCTAGCAAACATATTCCCAGTTGGTTGCCAGCATTCCCTGATGCCCATACGTACAGTCATTCAGCTTTATGGAGGAGGAAGCCGAAAGAGCTGCGTGCCGAGAAGATAGAACTTGCAAGGCAACGAAGGAAGGCGGAGAAATCTTTGTTGGGTTTGCAACAGAGATTGGTTTCCTGCGGTTCAGAAAGAAGTGGCAATGGCGAGATTGAGTTTTCAGGAGATGAAAGTAATTCATTACTTGGGACATGTTTTCAAGAGATAGAAGATGGATTTGGATTGCCTTATGAAAACACTAGTCCCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTCGCTCCTGCCATTGAGGTGATAAAAGGCGGTGGCTGTCCTAATAGTCAAGACGAGAAGGCAAAGATTCTTCCTCGTGCGAGGCCTCTTGTTCATTTTAAGTTAGAAACTTGCAAAACATTTATCGGAGGATCTATGAATTCGAATTCTAAAATGGGAGGAATTAGGGAATCCGTGTTTTGGGTTAGACGAAACGACGAAAGAGATCAAAAGCATAATAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCTCAAACATTCTATAGAGAAGCCAGAAGAACTCAATCAATCATAATTATTGCCAGTTGCTTGCTTCAATGTGTTAAACTTAAAGCCCTTTCTGAATCTCTCTTTTCTCTATTCAATTTTGCAATGGCAGATTGACCTGTGATCTAAACTCAAAAAATTAATTTCTTCCCCTCTTTTTCTTGTTTCA

mRNA sequence

GTCTAAGTTATTAGATGAGTTGATAATTTATTTTAAGTACAACCATTAGGGCAGGTAAATTCGAAGCGTTGATAGTTTTGTTGGCGCAAAACACGAAAATACGGCCGTCGGTAATTGCTCTCCCGTTTTGATCGCTTTCGTAGAATATTCGAAGCTTTTGGCGTTGCAGATTATTGGGTTTCTTGATTCCATCTCAGTTGGGTCTCTGATGCTCAAAGGCATCATTTGGAAGTTGATGAAGGACAAGAGTAAATAGTTATTTGAAAAGTATAAAACACAGACAGATTTAATTGTCTCCTCCAACTCTGAGGCACGTCTTCGTTCTCGGAATTTCTCTTCTCGGGTTTCAGATTTCAAATTGCCCTCTGTAATTCAACCCACCGTTACCTTGGGGAATTAAAGAAGAATTGAAATGCTGACAAAATTCGAAGAAAACTGAAATGCAGAGGCAATGAGGGATGGAGTTGGTAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGGAAATGCAGAGGCAATGAGTTTGGTCGAGAGGTGTCCAAAATTGCTGTGGCTCAAATGTGTAACAGTGTAGGGTTTCAAAGCTTTAAGGAGTCTGCTCTAGACACACTGGCCGACATTGCCATTAAATACCTTCATCAGTTAGGGAAGATTGCAACATTTTATGCTAATTTAGCTGGTAGAATAGAGTGCAATGTCTTTGATATAATCAGAGGGCTGGAAGAGTTGGAATCATCACAAGGGTTTCTGGGTGCTTGGCAATCAGATCATTGTCTTGCCAAATCGGGGTCAGTGAAAAACATTGTTTGCTATGTGAATTCTGTTCAAGAGATCCCTTTCGCTCATCCACTACCATGTTTCCCTGTGATCAGAAAAAGGGAGTCAATTCCTACCTTTGTTCAGATCGGTGAAACCCCACCTAGCAAACATATTCCCAGTTGGTTGCCAGCATTCCCTGATGCCCATACGTACAGTCATTCAGCTTTATGGAGGAGGAAGCCGAAAGAGCTGCGTGCCGAGAAGATAGAACTTGCAAGGCAACGAAGGAAGGCGGAGAAATCTTTGTTGGGTTTGCAACAGAGATTGGTTTCCTGCGGTTCAGAAAGAAGTGGCAATGGCGAGATTGAGTTTTCAGGAGATGAAAGTAATTCATTACTTGGGACATGTTTTCAAGAGATAGAAGATGGATTTGGATTGCCTTATGAAAACACTAGTCCCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTCGCTCCTGCCATTGAGGTGATAAAAGGCGGTGGCTGTCCTAATAGTCAAGACGAGAAGGCAAAGATTCTTCCTCGTGCGAGGCCTCTTGTTCATTTTAAGTTAGAAACTTGCAAAACATTTATCGGAGGATCTATGAATTCGAATTCTAAAATGGGAGGAATTAGGGAATCCGTGTTTTGGGTTAGACGAAACGACGAAAGAGATCAAAAGCATAATAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCTCAAACATTCTATAGAGAAGCCAGAAGAACTCAATCAATCATAATTATTGCCAGTTGCTTGCTTCAATGTGTTAAACTTAAAGCCCTTTCTGAATCTCTCTTTTCTCTATTCAATTTTGCAATGGCAGATTGACCTGTGATCTAAACTCAAAAAATTAATTTCTTCCCCTCTTTTTCTTGTTTCA

Coding sequence (CDS)

ATGAGGGATGGAGTTGGTAATAACATGAAGTCGAAAGAACAACAAAGCTCTGATTCGAGGAAATGCAGAGGCAATGAGTTTGGTCGAGAGGTGTCCAAAATTGCTGTGGCTCAAATGTGTAACAGTGTAGGGTTTCAAAGCTTTAAGGAGTCTGCTCTAGACACACTGGCCGACATTGCCATTAAATACCTTCATCAGTTAGGGAAGATTGCAACATTTTATGCTAATTTAGCTGGTAGAATAGAGTGCAATGTCTTTGATATAATCAGAGGGCTGGAAGAGTTGGAATCATCACAAGGGTTTCTGGGTGCTTGGCAATCAGATCATTGTCTTGCCAAATCGGGGTCAGTGAAAAACATTGTTTGCTATGTGAATTCTGTTCAAGAGATCCCTTTCGCTCATCCACTACCATGTTTCCCTGTGATCAGAAAAAGGGAGTCAATTCCTACCTTTGTTCAGATCGGTGAAACCCCACCTAGCAAACATATTCCCAGTTGGTTGCCAGCATTCCCTGATGCCCATACGTACAGTCATTCAGCTTTATGGAGGAGGAAGCCGAAAGAGCTGCGTGCCGAGAAGATAGAACTTGCAAGGCAACGAAGGAAGGCGGAGAAATCTTTGTTGGGTTTGCAACAGAGATTGGTTTCCTGCGGTTCAGAAAGAAGTGGCAATGGCGAGATTGAGTTTTCAGGAGATGAAAGTAATTCATTACTTGGGACATGTTTTCAAGAGATAGAAGATGGATTTGGATTGCCTTATGAAAACACTAGTCCCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTCGCTCCTGCCATTGAGGTGATAAAAGGCGGTGGCTGTCCTAATAGTCAAGACGAGAAGGCAAAGATTCTTCCTCGTGCGAGGCCTCTTGTTCATTTTAAGTTAGAAACTTGCAAAACATTTATCGGAGGATCTATGAATTCGAATTCTAAAATGGGAGGAATTAGGGAATCCGTGTTTTGGGTTAGACGAAACGACGAAAGAGATCAAAAGCATAATAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATACATTCTCAAACATTCTATAGAGAAGCCAGAAGAACTCAATCAATCATAA

Protein sequence

MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIAIKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNIVCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGTCFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPLVHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHSIEKPEELNQS

Homology

[Close]

BLAST of MELO3C009352.1 vs. NCBI nr
Match: XP_008442699.1 (PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >XP_016899603.1 PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >XP_016899604.1 PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >KAA0043998.1 transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa] >TYK25142.1 transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 744.6 bits (1921), Expect = 4.2e-211
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. NCBI nr
Match: XP_031738252.1 (transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738253.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738254.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738255.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >KGN58974.1 hypothetical protein Csa_002614 [Cucumis sativus])

HSP 1 Score: 702.2 bits (1811), Expect = 2.4e-198
Identity = 349/370 (94.32%), Postives = 357/370 (96.49%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEF +EVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYLH LGKIATFYANLAGRIECNVFDIIRGLEELE SQGFLGAWQSDHCLA SGSVKNI
Sbjct: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCF VIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKPKELRAEKIELA+QRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSG ESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           CFQEIEDG GLPYENTS KDGISHLSVPEVFAPAIE IKGGGCPNSQDEKAKILPR RPL
Sbjct: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLETCKTF+GGSMN ++KM GIRESVFWVRR+DERD+KH NERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. NCBI nr
Match: XP_038904421.1 (transcription initiation factor TFIID subunit 8-like [Benincasa hispida])

HSP 1 Score: 637.1 bits (1642), Expect = 9.4e-179
Identity = 317/370 (85.68%), Postives = 339/370 (91.62%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSD RKCRGNEFGRE+SKIAVAQMCN VGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDLRKCRGNEFGRELSKIAVAQMCNRVGFQSFKESALDTLADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYL  LGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAW+SDHCLA SGSVKNI
Sbjct: 61  IKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWESDHCLANSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSV+EIPFAHPLP FPVIR R SIP+FVQIGETPPS+HIP+WLPAFPDAHTY+HSA
Sbjct: 121 VCYVNSVEEIPFAHPLPRFPVIRNRGSIPSFVQIGETPPSRHIPNWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWR+KP E  AEKIELARQRRKA KSLLGLQQRL+SCGSERS NG+I FSGDESNSLLGT
Sbjct: 181 LWRKKPGEPHAEKIELARQRRKAGKSLLGLQQRLISCGSERSRNGQIGFSGDESNSLLGT 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           C QE+EDG GL  +N   KDGI HLSVPEVFAPAIE IKGG  PNSQD+KAKILPRARPL
Sbjct: 241 CLQEMEDGIGLHSDNIIGKDGICHLSVPEVFAPAIEAIKGGCFPNSQDDKAKILPRARPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLETCKTF+GGSMN N+KM G+RESVFW RR++ERDQK + ERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETCKTFLGGSMNLNAKMAGVRESVFWFRRDNERDQKRDGERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           I+ PEELN+S
Sbjct: 361 IDNPEELNKS 370

[Close]

BLAST of MELO3C009352.1 vs. NCBI nr
Match: XP_022934759.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita moschata])

HSP 1 Score: 606.7 bits (1563), Expect = 1.4e-169
Identity = 302/370 (81.62%), Postives = 330/370 (89.19%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+ GREVS+IAV QMCN  GFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDLGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYL  LG+IA FYANLAGR ECNVFDIIRG+EELESSQGF GAW+ +HCL  SGSVK+I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKSI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           V YVNSV EIPFAHPLP FPVIR RE IP+FVQIGE PPSKHIPSWLPAFPDAHTY+HSA
Sbjct: 121 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKP+E RAEKIELARQRRKAEKSLLGLQ+RLVSCGSERSGNG+IEFSG ESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLGS 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           C QE+EDG G P E +  KDGISHLSVPEVFAPAIEVIKG G PNS+D++A ILPRARPL
Sbjct: 241 CLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEVIKGRGFPNSRDDEANILPRARPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLET +TF+GGSMN N+K+ GIRESVFWVRR+DERDQKHN ERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDERDQKHNKERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           I+KPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. NCBI nr
Match: KAG6580615.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 606.3 bits (1562), Expect = 1.8e-169
Identity = 301/370 (81.35%), Postives = 330/370 (89.19%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+FGREVS+IAV QMCN  GFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYL  LG+IA FYANLAGR ECNVFDIIRG+EELESSQGF GAW+ +HCL  SGSVK+I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKSI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           V YVNSV EIPFAHPLP FPVIR RE IP+FVQIGE PPSKHIPSWLPAFPDAHTY+HSA
Sbjct: 121 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKP+E RAEKIELARQRRKAEKSLLGLQ+RLVSCGSERSGNG+IEFSG ESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLGS 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           C QE+EDG G P E +  KDGISHLSVPEVFAPAIE IKG G PNS+D++A ILPRARPL
Sbjct: 241 CLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEAIKGRGFPNSRDDEANILPRARPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLET +TF+GGSMN N+K+ GIRESVFWVRR+DERDQKHN ERDEKKRRV+YIL+HS
Sbjct: 301 VHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDERDQKHNKERDEKKRRVDYILRHS 360

Query: 361 IEKPEELNQS 371
           I+KPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.0e-63
Identity = 151/375 (40.27%), Postives = 219/375 (58.40%), Query Frame = 0


Query: 7   NNMKSKEQQSSDSRKCRG----NEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIAIK 66
           N  +++E   +D+    G     EF    +K AVAQ+C SVG+++FK+ AL++L+  A++
Sbjct: 2   NTERAQEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQ 61

Query: 67  YLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNIVC 126
           Y+ QLGK AT +ANL GR +CNVFDII  L++L  + G  G       L +S  ++ I+ 
Sbjct: 62  YILQLGKTATSFANLTGRSQCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIID 121

Query: 127 YVNSVQEIPFAHPLPCFPVI---RKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHS 186
           +VNS +E+PF+ PLP FPV    R R+ IP+FV+IGETPP KHIP WLPAFPD HTY  +
Sbjct: 122 FVNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET 181

Query: 187 ALWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSG-----NGEIEFSGDES 246
            +W  +  + R +KIE ARQRRKAE++LL LQ++LV   S R+      +G  E   D+ 
Sbjct: 182 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDDE 241

Query: 247 NSLLGTCFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKIL 306
           + L     + +  G  +   N   +DG   LSV E FAPA+E  + G    +  E  K  
Sbjct: 242 SEL-----RSVSSGEKVESLN---RDG---LSVIEAFAPAMEAARDGFSSEAHTEWKK-- 301

Query: 307 PRARPLVHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVE 366
              +P+   KL T K F+G  ++ + +M G    + +VR  D         RD+K+RR E
Sbjct: 302 --NKPVALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREED---------RDDKRRRAE 352

Query: 367 YILKHSIEKPEELNQ 370
           +IL+  +E P +LNQ
Sbjct: 362 FILRQCMENPVDLNQ 352

[Close]

BLAST of MELO3C009352.1 vs. ExPASy Swiss-Prot
Match: A7MAZ4 (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.8e-08
Identity = 43/179 (24.02%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 29  REVSKIAVAQMCNSVGFQSFKESALDTLADIAIKYLHQLGKIATFYANLAGRIECNVFDI 88
           R   ++ V+ +    GF+S ++++++TL ++   Y+ ++G+ A  Y     R +  + DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 89  IRGLEELESSQGFLGAWQSDHCLAKSGSVKNIVCYVNSVQEIPFAHPLPCFPVIRKRESI 148
           +  L E+    GF              +V  +  Y    Q +    P    PV  +  + 
Sbjct: 94  VVTLVEM----GF--------------NVDTLPAYAKRSQRMVITAP----PVTNQPVTP 153

Query: 149 PTFVQIGETPPSKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELARQRRKAEKSL 208
                    P   HIPS  P FPD HTY  +  +R    + +  + + A QRR  E++L
Sbjct: 154 KALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

[Close]

BLAST of MELO3C009352.1 vs. ExPASy Swiss-Prot
Match: Q7Z7C8 (Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.8e-08
Identity = 43/179 (24.02%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 29  REVSKIAVAQMCNSVGFQSFKESALDTLADIAIKYLHQLGKIATFYANLAGRIECNVFDI 88
           R   ++ V+ +    GF+S ++++++TL ++   Y+ ++G+ A  Y     R +  + DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 89  IRGLEELESSQGFLGAWQSDHCLAKSGSVKNIVCYVNSVQEIPFAHPLPCFPVIRKRESI 148
           +  L E+    GF              +V  +  Y    Q +    P    PV  +  + 
Sbjct: 94  VVTLVEM----GF--------------NVDTLPAYAKRSQRMVITAP----PVTNQPVTP 153

Query: 149 PTFVQIGETPPSKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELARQRRKAEKSL 208
                    P   HIPS  P FPD HTY  +  +R    + +  + + A QRR  E++L
Sbjct: 154 KALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

[Close]

BLAST of MELO3C009352.1 vs. ExPASy Swiss-Prot
Match: Q9EQH4 (Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.6e-08
Identity = 43/179 (24.02%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 29  REVSKIAVAQMCNSVGFQSFKESALDTLADIAIKYLHQLGKIATFYANLAGRIECNVFDI 88
           R   ++ V+ +    GF+S ++++++TL ++   Y+ ++G+ A  Y     R +  + DI
Sbjct: 32  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 91

Query: 89  IRGLEELESSQGFLGAWQSDHCLAKSGSVKNIVCYVNSVQEIPFAHPLPCFPVIRKRESI 148
           +  L E+    GF              +V  +  Y    Q +    P    PV  +  + 
Sbjct: 92  VVTLVEM----GF--------------NVDTLPAYAKRSQRMVITAP----PVTNQPVTP 151

Query: 149 PTFVQIGETPPSKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELARQRRKAEKSL 208
                    P   HIPS  P FPD HTY  +  +R    + +  + + A QRR  E++L
Sbjct: 152 KALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQILREKAASQRRDVERAL 188

[Close]

BLAST of MELO3C009352.1 vs. ExPASy Swiss-Prot
Match: Q7ZYA2 (Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf8 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.7e-08
Identity = 44/180 (24.44%), Postives = 79/180 (43.89%), Query Frame = 0


Query: 29  REVSKIAVAQMCNSVGFQSFKESALDTLADIAIKYLHQLGKIATFYANLAGRIECNVFDI 88
           R   ++ V+ +    GF S +++A+++L ++   YL ++G+ A  Y     R +  + DI
Sbjct: 24  RRTLQVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDI 83

Query: 89  IRGLEELESSQGFLGAWQSDHCLAKSGSVKNIVCYVNSVQEIPFAHPLPCFPVIRKRESI 148
           +  L E+    GF              +V ++  Y    Q +         P +     +
Sbjct: 84  VVTLIEM----GF--------------NVDSLPAYAKRSQRMVIT-----APPVTNNPVV 143

Query: 149 PTFVQIGETPP-SKHIPSWLPAFPDAHTYSHSALWRRKPKELRAEKIELARQRRKAEKSL 208
           P  +  G+  P   HIPS  P FPD HTY  +  +R    + +  + + A QRR  E++L
Sbjct: 144 PKALSAGDNKPHPAHIPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERAL 180

[Close]

BLAST of MELO3C009352.1 vs. ExPASy TrEMBL
Match: A0A1S3B6Z5 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103486494 PE=3 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 2.0e-211
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. ExPASy TrEMBL
Match: A0A5D3DNP1 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002670 PE=3 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 2.0e-211
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. ExPASy TrEMBL
Match: A0A0A0LDI8 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_3G740170 PE=3 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 1.1e-198
Identity = 349/370 (94.32%), Postives = 357/370 (96.49%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEF +EVSKIAVAQMCNSVGFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYLH LGKIATFYANLAGRIECNVFDIIRGLEELE SQGFLGAWQSDHCLA SGSVKNI
Sbjct: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           VCYVNSVQEIPFAHPLPCF VIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKPKELRAEKIELA+QRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSG ESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           CFQEIEDG GLPYENTS KDGISHLSVPEVFAPAIE IKGGGCPNSQDEKAKILPR RPL
Sbjct: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLETCKTF+GGSMN ++KM GIRESVFWVRR+DERD+KH NERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           IEKPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. ExPASy TrEMBL
Match: A0A6J1F3H6 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111441840 PE=3 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 6.6e-170
Identity = 302/370 (81.62%), Postives = 330/370 (89.19%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+ GREVS+IAV QMCN  GFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDLGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYL  LG+IA FYANLAGR ECNVFDIIRG+EELESSQGF GAW+ +HCL  SGSVK+I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKSI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           V YVNSV EIPFAHPLP FPVIR RE IP+FVQIGE PPSKHIPSWLPAFPDAHTY+HSA
Sbjct: 121 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKP+E RAEKIELARQRRKAEKSLLGLQ+RLVSCGSERSGNG+IEFSG ESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLGS 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           C QE+EDG G P E +  KDGISHLSVPEVFAPAIEVIKG G PNS+D++A ILPRARPL
Sbjct: 241 CLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEVIKGRGFPNSRDDEANILPRARPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLET +TF+GGSMN N+K+ GIRESVFWVRR+DERDQKHN ERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDERDQKHNKERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           I+KPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. ExPASy TrEMBL
Match: A0A6J1J4F9 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111481673 PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.3e-169
Identity = 298/370 (80.54%), Postives = 329/370 (88.92%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+FGREVS+IAV QMCN  GFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120
           IKYL  LG+IA FYANLAGR ECNVFDIIRG+EELESSQGF GAW+ +HCL  SGSVK I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKKI 120

Query: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
           V YVNSV+EIPFAHPLP FPVIR RE IP+FVQIGE PPSKHIPSWLPAFPDAHTY+HSA
Sbjct: 121 VRYVNSVEEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240
           LWRRKP+E RAEKIELARQRRKAEKSLLGLQQRLVSCG ERSGNG++EFSG ESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQQRLVSCGLERSGNGKVEFSGGESNSFLGS 240

Query: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300
           C QE+EDG G P EN+  KDGISHLSVPEVFAPA+E IKG G PNS+D++A ILPR RPL
Sbjct: 241 CLQEMEDGIGFPSENSIGKDGISHLSVPEVFAPALEAIKGSGFPNSRDDEANILPRVRPL 300

Query: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360
           VHFKLET +TF+GGSMN N+++ GIRESVFWVRR+DER+QKHN ERDEKKRRVEYIL+HS
Sbjct: 301 VHFKLETSRTFLGGSMNLNAEVTGIRESVFWVRRDDERNQKHNKERDEKKRRVEYILRHS 360

Query: 361 IEKPEELNQS 371
           I+KPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of MELO3C009352.1 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 243.8 bits (621), Expect = 2.2e-64
Identity = 151/375 (40.27%), Postives = 219/375 (58.40%), Query Frame = 0


Query: 7   NNMKSKEQQSSDSRKCRG----NEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIAIK 66
           N  +++E   +D+    G     EF    +K AVAQ+C SVG+++FK+ AL++L+  A++
Sbjct: 2   NTERAQEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQ 61

Query: 67  YLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNIVC 126
           Y+ QLGK AT +ANL GR +CNVFDII  L++L  + G  G       L +S  ++ I+ 
Sbjct: 62  YILQLGKTATSFANLTGRSQCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIID 121

Query: 127 YVNSVQEIPFAHPLPCFPVI---RKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHS 186
           +VNS +E+PF+ PLP FPV    R R+ IP+FV+IGETPP KHIP WLPAFPD HTY  +
Sbjct: 122 FVNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET 181

Query: 187 ALWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSG-----NGEIEFSGDES 246
            +W  +  + R +KIE ARQRRKAE++LL LQ++LV   S R+      +G  E   D+ 
Sbjct: 182 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISSRNPVWGDMDGVKEEMRDDE 241

Query: 247 NSLLGTCFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKIL 306
           + L     + +  G  +   N   +DG   LSV E FAPA+E  + G    +  E  K  
Sbjct: 242 SEL-----RSVSSGEKVESLN---RDG---LSVIEAFAPAMEAARDGFSSEAHTEWKK-- 301

Query: 307 PRARPLVHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVE 366
              +P+   KL T K F+G  ++ + +M G    + +VR  D         RD+K+RR E
Sbjct: 302 --NKPVALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREED---------RDDKRRRAE 352

Query: 367 YILKHSIEKPEELNQ 370
           +IL+  +E P +LNQ
Sbjct: 362 FILRQCMENPVDLNQ 352

[Close]

BLAST of MELO3C009352.1 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 168.7 bits (426), Expect = 8.8e-42
Identity = 122/388 (31.44%), Postives = 187/388 (48.20%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNS--------------VGFQ 60
           M +GVG     + +     +  RGN+F   ++++AVAQ+C S              V F 
Sbjct: 17  MNNGVGEGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFS 76

Query: 61  SFKESALDTLADIAIKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQ 120
           SF+ESALDTL D+A++Y+  +GK A  YANLAGR++ N  DI++ LE+L S  GF G   
Sbjct: 77  SFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSD 136

Query: 121 SDHCLAKSGSVKNIVCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSW 180
           +DHCLA SG VK+I+ Y    +EIPF + LP FP  ++++  P+F ++G  PP +HIP W
Sbjct: 137 TDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVW 196

Query: 181 LPAFPDAHTYSHSALWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCG-----SER 240
           LPAFP+      S       +E  A  IE     ++   SL  +Q      G        
Sbjct: 197 LPAFPETELCDRS-------EETNAATIEGEIPSKENGSSLPSMQLSFDGGGRLEIHKSS 256

Query: 241 SGNGEIEFSGDESNSLLGTCFQEIEDGFG---LPYE--------NTSPKDGI---SHLSV 300
              GE   +  E N  L    + +E        P E        N  P   +    H+ +
Sbjct: 257 KDVGESTEAVVEGNLFLTAPLRFVEKNVSPVVRPLELSNEVVRTNHVPDKHVRNNHHIPI 316

Query: 301 PEVFAPAIEVIKGGGCPNSQD-EKAKILPRARPLVHFKLETCKTFIGGSMNSNSKMGGIR 355
            E  AP+ ++        S+D EK  +  +   LV FK+ T K  +  + N + +  G  
Sbjct: 317 LEASAPSDKINNKNWLAISKDVEKVDVARKELTLVRFKIGTTKRSMCLAKNRSFQEEG-- 376

[Close]

BLAST of MELO3C009352.1 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 163.7 bits (413), Expect = 2.8e-40
Identity = 90/227 (39.65%), Postives = 126/227 (55.51%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSV---------------GF 60
           M +G G     + +        RGN+F   ++++A AQ+C SV                F
Sbjct: 1   MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60

Query: 61  QSFKESALDTLADIAIKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAW 120
            SF+E+AL+TL D+ I+Y+  +GK A FY N+AGR+E N  DI++ LE+L S  GF GA 
Sbjct: 61  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120

Query: 121 QSDHCLAKSGSVKNIVCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPS 180
             +HCLA SG VK+I+ Y    +EIPF + LP FP  R +   P+F  IG  PP +HIP 
Sbjct: 121 DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPV 180

Query: 181 WLPAFPDAHTYSHSALWRRKPKELRAEKIELARQRRKAEKSLLGLQQ 213
           WLPAFP+    + S       +E+  +KIE   Q R    SL+ +QQ
Sbjct: 181 WLPAFPETKMSNGS-------EEINVDKIERDVQSRDNGSSLMSVQQ 220

[Close]

BLAST of MELO3C009352.1 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-21
Identity = 79/259 (30.50%), Postives = 124/259 (47.88%), Query Frame = 0


Query: 8   NMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIAIKYLHQL 67
           N K K +++SD       EF   ++KIAV+Q+C S+G+++   SAL+TL     K+L  L
Sbjct: 7   NSKLKFEETSDQSPTSTAEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSL 66

Query: 68  GKIATFYANLAGRIECNVFDIIRGLEE--LESSQGFLGAWQ----SDHCLAKSGSVKNIV 127
            ++A+ ++N A R E N+FDI+ GL++  L +S  F G          CL KS  ++N+ 
Sbjct: 67  AELASSFSNTANRTEVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLS 126

Query: 128 CYVNSVQEIPFAHPLPCFPVIRKRESIPTF------VQIGETPPSKHIPSWLPAFPDAHT 187
            +V    EIPFA PLP      +RE   +F      V +  +     +P+WLP FPD+  
Sbjct: 127 DFVTYAPEIPFAKPLP------RRERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPDSSL 186

Query: 188 YSHSA--------LWRRKPKELRAEKIELARQRRKA-------EKSLLGLQQRLVSCGSE 240
            S           LW      +R E +  + + +         +K    ++QR  S G  
Sbjct: 187 CSDRCSKDNRSDHLWENSDSVIRREILPESLKSKSGGRLPVMRDKVRFKMEQRDWSSG-- 246

The following BLAST results are available for this feature:

BLAST of MELO3C009352.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442699.1	4.2e-211	100.00	PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >...	[more]
XP_031738252.1	2.4e-198	94.32	transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738253....	[more]
XP_038904421.1	9.4e-179	85.68	transcription initiation factor TFIID subunit 8-like [Benincasa hispida]	[more]
XP_022934759.1	1.4e-169	81.62	transcription initiation factor TFIID subunit 8-like [Cucurbita moschata]	[more]
KAG6580615.1	1.8e-169	81.35	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]

BLAST of MELO3C009352.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	3.0e-63	40.27	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
A7MAZ4	2.8e-08	24.02	Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE...	[more]
Q7Z7C8	2.8e-08	24.02	Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 ...	[more]
Q9EQH4	3.6e-08	24.02	Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8...	[more]
Q7ZYA2	4.7e-08	24.44	Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf...	[more]

BLAST of MELO3C009352.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6Z5	2.0e-211	100.00	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DNP1	2.0e-211	100.00	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LDI8	1.1e-198	94.32	Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A6J1F3H6	6.6e-170	81.62	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J4F9	3.3e-169	80.54	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MELO3C009352.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34340.1	2.2e-64	40.27	TBP-associated factor 8	[more]
AT3G02160.1	8.8e-42	31.44	Bromodomain transcription factor	[more]
AT5G15570.1	2.8e-40	39.65	Bromodomain transcription factor	[more]
AT1G31240.1	1.3e-21	30.50	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR46338:SF1	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..369
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 25..101 e-value: 7.4E-28 score: 108.5
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 26..95 e-value: 4.9E-22 score: 77.7
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 162..210 e-value: 9.5E-15 score: 54.9
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 162..214 e-value: 7.41584E-18 score: 74.6167
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 23..108 e-value: 1.3E-19 score: 71.6
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..369

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C009352	MELO3C009352	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009352.1:exon:126232	MELO3C009352.1:exon:126232	exon
MELO3C009352.1:exon:126233	MELO3C009352.1:exon:126233	exon
MELO3C009352.1:exon:126234	MELO3C009352.1:exon:126234	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009352.1:five_prime_utr	MELO3C009352.1:five_prime_utr	five_prime_UTR
MELO3C009352.1:five_prime_utr	MELO3C009352.1:five_prime_utr_2	five_prime_UTR
MELO3C009352.1:five_prime_utr	MELO3C009352.1:five_prime_utr_3	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009352.1:cds	MELO3C009352.1:cds	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009352.1:three_prime_utr	MELO3C009352.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C009352.1	MELO3C009352.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity