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MELO3C006435.jh1.t2 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.CGATGGCCAAATGGGACTGAAATTGGAAGCAGAGAGGTACGGCGGTGGACGACCCTTTGATTTCGGATCACATGGATCCCTTAGAGGATTCTAGTTGTTGGGATTTTCTCGATTGCTCCTTCTTCCCCGACGCCGACAATCTTATTAACCCTTCACTCGATCCTTTGTGGCCTCCTAATGATTCCAGGCAATCATTCTACAACACCCTTTTCTGCATTCTCTCTTTCCTCTTCTCTTTTCCTTCCCTGTTTGTTTATACGAAGCATGGTTTTCGTTTCATTTGCAGGAAGGGTTCTTTAGCGGATACTGATGTTTCAGCCGGTCGTGTCGAATCTGAAGAAAATGATTGTTCGAGGAAGAGGTAGTTTTCTTTTTGGTCTATACTGATATTGTACCTGATTATACCATCTTACTTGCCTGAATTCTGCTTTCTGATTTTGGACGTTGCATAACTCTTTTCAGCTGGAATTTGGAAATAAGCTATCTTTTGTTATAAGTTTTATCTTTCTAGTAATGTTTTTGAACCTTTTCGTTGATTTTTCACTTATGTTTATCTCAAATTTTCCTACTTGAAATAATTCTCAGGACACGAGATGGGTCGTGCGCTGGACCATCTTCAAAAGCTTGTCGTGAGAGGTTGCGGAGGGAGAAATTAAATGATAGGCAAGCATTTTCTGTTATCCAACACATTTGTAATTCTATATGCTTCTTTTCTACCATTTTGTTTGATGATGATGATGATGATGATGATGATGGGATAAGCCTAATGGTATTTATGATCTGTGTATGAATTTATTTTTCTATCCAAACGGGAGTTCAAGGCTGCAATCACTTGTTCAGAGGATGAGTCAATTCTTCTCTTAGTTGTTACAAGGACATGTAGTCAAGTGTAAAGCTTTCCTTTCGTTGATAATTTGTGCAGGTTTCTAGATTTGAGCATTGCTTTAGAACCTAGTAGACATACCAAAACTAACAAGCCGGCCATACTTGATGATGCCATAAGAGTGTTGAATCAACTTAAGAATGAAGCCGAAGACCTCAAACAAACTAATGAAAAGTTGCGAGAAGAATTGGAGAACTTAAAGGTTAGTTATCATGTAAGAAAAGCAATCAGCTTCATATTATCTTTGAGTGCTGCTAGAGTCGAGATATTCTAATCTTGTATCTTTTTTCAATTAAAATTTTGCACTTTTCTTGATGTAAATAATTTGCAAATCATGAAGCTTTTACTCTCTGTACCAAAGGCTGCTGCTTTTAATCTCTTGCATCTTTAATATTTTTATGTTTTCGTAAAGGAGCCATTTCTTTTATGAATTCCTATTAGTGCAATTGTGCCTCTTGCATGAACTGCTTCTCAGTGCAATTATGCTATTGTTTGGTATAGCTATAGATCTCTCGCACACTTCTTGTGTTTAGTATTATTTTTCAAAATCTTTTCTTCTAACTTGTATTCTGTGATTGTACCTAACACAAAAACTTTCATGATATTTGGTTAAATGTCAAAAAGGAAATTTTGAAAATATTGTGAAGTATTGGAATCAGTGTGTATTTTGGAAGGAATACATGGTATACCCCTCCCCCACTCGAAACTATTTATCGGGTATTTGCTTCACTTCAAAATACCACTCCAAGAAGTTAAAACTTAAAACGAAAGTAAATCCATTTATACTTGCATGCCATTGTCACAAATTAAAACAACTATTGATGCGTTTCAATGATTTGGTTATCCTGTTTTCTTCTTTTAACATAACTTTTGGTTGTATAAATTGTTGAACAGGCAGAGAAGAATGATCTTCGGAAAGAGAAAATAATTCTGAAGGAAGAAAAAGAAAAAATGGAACAACAGTTGAAATCTATAGCCATTCCATCTCCAGGGCTTATCCCTGGTCATCCAGCTACATATCATGCTGCTTCAGGTAAGATGGCTGTTTTTCCTGGTTATGGTTTGATCCCAATGTGGCAATATCTTCCTCCATCAATACGAGATACATCTCAAGATCATGAGCTCAGGCCCCCTGCTGCTTAGTTTATTTAATTTTTTCCACCTTTTAAATAACTAGACTAGAGTCTCTCTTTCTTCCTTTCATCCATCCGTCCATCCATCCATTTTTGCTTCACCAGCATGTAAATTTCTCTCAACACATTTCCTGATTGTTCTTCTAAACAATTAGTTCCAAAATGGAACCACGATTTGCAAGGACTACTGTTTACTCT CGATGGCCAAATGGGACTGAAATTGGAAGCAGAGAGGTACGGCGGTGGACGACCCTTTGATTTCGGATCACATGGATCCCTTAGAGGATTCTAGTTGTTGGGATTTTCTCGATTGCTCCTTCTTCCCCGACGCCGACAATCTTATTAACCCTTCACTCGATCCTTTGTGGCCTCCTAATGATTCCAGGAAGGGTTCTTTAGCGGATACTGATGTTTCAGCCGGTCGTGTCGAATCTGAAGAAAATGATTGTTCGAGGAAGAGGACACGAGATGGGTCGTGCGCTGGACCATCTTCAAAAGCTTGTCGTGAGAGGTTGCGGAGGGAGAAATTAAATGATAGGTTTCTAGATTTGAGCATTGCTTTAGAACCTAGTAGACATACCAAAACTAACAAGCCGGCCATACTTGATGATGCCATAAGAGTGTTGAATCAACTTAAGAATGAAGCCGAAGACCTCAAACAAACTAATGAAAAGTTGCGAGAAGAATTGGAGAACTTAAAGGTTAGTTATCATGCAGAGAAGAATGATCTTCGGAAAGAGAAAATAATTCTGAAGGAAGAAAAAGAAAAAATGGAACAACAGTTGAAATCTATAGCCATTCCATCTCCAGGGCTTATCCCTGGTCATCCAGCTACATATCATGCTGCTTCAGGTAAGATGGCTGTTTTTCCTGGTTATGGTTTGATCCCAATGTGGCAATATCTTCCTCCATCAATACGAGATACATCTCAAGATCATGAGCTCAGGCCCCCTGCTGCTTAGTTTATTTAATTTTTTCCACCTTTTAAATAACTAGACTAGAGTCTCTCTTTCTTCCTTTCATCCATCCGTCCATCCATCCATTTTTGCTTCACCAGCATGTAAATTTCTCTCAACACATTTCCTGATTGTTCTTCTAAACAATTAGTTCCAAAATGGAACCACGATTTGCAAGGACTACTGTTTACTCT ATGGATCCCTTAGAGGATTCTAGTTGTTGGGATTTTCTCGATTGCTCCTTCTTCCCCGACGCCGACAATCTTATTAACCCTTCACTCGATCCTTTGTGGCCTCCTAATGATTCCAGGAAGGGTTCTTTAGCGGATACTGATGTTTCAGCCGGTCGTGTCGAATCTGAAGAAAATGATTGTTCGAGGAAGAGGACACGAGATGGGTCGTGCGCTGGACCATCTTCAAAAGCTTGTCGTGAGAGGTTGCGGAGGGAGAAATTAAATGATAGGTTTCTAGATTTGAGCATTGCTTTAGAACCTAGTAGACATACCAAAACTAACAAGCCGGCCATACTTGATGATGCCATAAGAGTGTTGAATCAACTTAAGAATGAAGCCGAAGACCTCAAACAAACTAATGAAAAGTTGCGAGAAGAATTGGAGAACTTAAAGGTTAGTTATCATGCAGAGAAGAATGATCTTCGGAAAGAGAAAATAATTCTGAAGGAAGAAAAAGAAAAAATGGAACAACAGTTGAAATCTATAGCCATTCCATCTCCAGGGCTTATCCCTGGTCATCCAGCTACATATCATGCTGCTTCAGGTAAGATGGCTGTTTTTCCTGGTTATGGTTTGATCCCAATGTGGCAATATCTTCCTCCATCAATACGAGATACATCTCAAGATCATGAGCTCAGGCCCCCTGCTGCTTAG MDPLEDSSCWDFLDCSFFPDADNLINPSLDPLWPPNDSRKGSLADTDVSAGRVESEENDCSRKRTRDGSCAGPSSKACRERLRREKLNDRFLDLSIALEPSRHTKTNKPAILDDAIRVLNQLKNEAEDLKQTNEKLREELENLKVSYHAEKNDLRKEKIILKEEKEKMEQQLKSIAIPSPGLIPGHPATYHAASGKMAVFPGYGLIPMWQYLPPSIRDTSQDHELRPPAA Homology
BLAST of MELO3C006435.jh1.t2 vs. NCBI nr
Match: XP_008438540.1 (PREDICTED: transcription factor bHLH104-like [Cucumis melo]) HSP 1 Score: 439 bits (1128), Expect = 6.32e-155 Identity = 225/230 (97.83%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. NCBI nr
Match: KAA0049262.1 (transcription factor bHLH104-like protein [Cucumis melo var. makuwa] >TYK17295.1 transcription factor bHLH104-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 422 bits (1085), Expect = 7.44e-148 Identity = 225/263 (85.55%), Postives = 226/263 (85.93%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. NCBI nr
Match: XP_004134070.1 (transcription factor bHLH104 [Cucumis sativus] >KGN56869.1 hypothetical protein Csa_010203 [Cucumis sativus]) HSP 1 Score: 414 bits (1063), Expect = 5.12e-145 Identity = 212/230 (92.17%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. NCBI nr
Match: XP_038877371.1 (transcription factor bHLH104-like [Benincasa hispida]) HSP 1 Score: 396 bits (1018), Expect = 3.56e-138 Identity = 206/230 (89.57%), Postives = 213/230 (92.61%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. NCBI nr
Match: XP_022979204.1 (transcription factor bHLH104-like [Cucurbita maxima]) HSP 1 Score: 365 bits (937), Expect = 7.81e-126 Identity = 190/230 (82.61%), Postives = 206/230 (89.57%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q8L467 (Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.8e-53 Identity = 115/187 (61.50%), Postives = 145/187 (77.54%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q9LTC7 (Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.0e-48 Identity = 111/188 (59.04%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.0e-36 Identity = 92/208 (44.23%), Postives = 125/208 (60.10%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q9C682 (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.4e-34 Identity = 92/196 (46.94%), Postives = 123/196 (62.76%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q9LT23 (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy TrEMBL
Match: A0A1S3AXA4 (transcription factor bHLH104-like OS=Cucumis melo OX=3656 GN=LOC103483605 PE=4 SV=1) HSP 1 Score: 439 bits (1128), Expect = 3.06e-155 Identity = 225/230 (97.83%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7U0F5 (Transcription factor bHLH104-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001490 PE=4 SV=1) HSP 1 Score: 422 bits (1085), Expect = 3.60e-148 Identity = 225/263 (85.55%), Postives = 226/263 (85.93%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy TrEMBL
Match: A0A0A0L755 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135660 PE=4 SV=1) HSP 1 Score: 414 bits (1063), Expect = 2.48e-145 Identity = 212/230 (92.17%), Postives = 218/230 (94.78%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1IW19 (transcription factor bHLH104-like OS=Cucurbita maxima OX=3661 GN=LOC111479009 PE=4 SV=1) HSP 1 Score: 365 bits (937), Expect = 3.78e-126 Identity = 190/230 (82.61%), Postives = 206/230 (89.57%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1EE84 (transcription factor bHLH104-like OS=Cucurbita moschata OX=3662 GN=LOC111431762 PE=4 SV=1) HSP 1 Score: 361 bits (926), Expect = 1.79e-124 Identity = 189/230 (82.17%), Postives = 206/230 (89.57%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. TAIR 10
Match: AT4G14410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 210.7 bits (535), Expect = 1.3e-54 Identity = 115/187 (61.50%), Postives = 145/187 (77.54%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. TAIR 10
Match: AT4G14410.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 210.7 bits (535), Expect = 1.3e-54 Identity = 115/187 (61.50%), Postives = 145/187 (77.54%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. TAIR 10
Match: AT3G23210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 194.9 bits (494), Expect = 7.1e-50 Identity = 111/188 (59.04%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37 Identity = 92/208 (44.23%), Postives = 125/208 (60.10%), Query Frame = 0
BLAST of MELO3C006435.jh1.t2 vs. TAIR 10
Match: AT1G51070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35 Identity = 92/196 (46.94%), Postives = 123/196 (62.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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