MELO3C005979.jh1.t2 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATTCACATTGAATTTTGCTCTAAATTGAGTTTGCTCTTAATACAACTCAGATTATCAATGTCTTTTGGCATCTGCTTCGTATCGTCTTGTTTGCCTTGCTCAATAGTTGCTTGTAGAAGAGGAGTGCGATTTATCGTCTTTAGTGATCTCTCCTTCCTCACCTCCTTTTTATTTCCCCGTCTGCAAGTTCGTTTTTTCGTAGTTGAGCTTCTCTAAGCTATTCATTTACAGAAATTATATATATGTTTTTTATCTATTAAAATAGTCATCTAATTAAATTTTATTGTAACCTCTTAATTTAAGCCTTTAGATTTAGTGGTGAGTTAACGTTGTATAGTATAAGAATAATGCTCGAACCTCTGAAATTTTATTTCATTCCCAATTATGTTGACTTTCATCTATGTATTTCCTAAATTTTTAAGAACACAAATAAGGGGGTGAGAGTGATTCTAAAATTGTTGTTGTCATTTTTAAATTTACATGTAAAATGCTTTTAAACTTTCTAAACCAATTTCATTGGTACGAAAAATGTAGTTAAAAGTATAAAATCAAACATCGAGTAGTATAAGCCGTGTTTAAAAGTGTTTTTAAACATGAAGAAAGTGATTTTGATAACTTCAAAATCACTCCAAAATACATACTCACTCAAGCTTTTGGGTTGATAGTTAGTTAACAAGATAGTGCGGTAATTTGACTGTTTTTCAATGCATGCCTCATTGAGTTGTGTTGAATAGTGTATTGGTTCATCTCTACCTGTTCCTTTGGTTTTATAAATCTATTGACACCCTCTGTCAGGCGGGGCATTTTCCGGATATGCAACATCAAGAGCTTTCATAACTCAAATCAAGCAAGTACAGCGCCACTGCTCGTGTCAGAGTTTCAATCACAGCAGGTTAGATTTTGAATATTGGTTGATGGCTGTGATTACTGATTTGTATTTCATAGTGAAGAAGGTATCTTGTGATCAGATAAGTCCTGACCCGAATTATTTTTTCGTGCATGATCAGCAAAGATAATTCTTATATATCATTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTATTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCGTTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAATAAACGGAGACAAAAAGAAAACAATGCCCCTGATGACTTTCCAAGCTTTGTCAGGGAAGGTATGTATCAGGCTGCTATTCCATGGTTCAATTGAGGTATCTTTAACTTCAAGGCATTGCCTTCTAAATGCAACTCTGATGTCTTTCCTGAAAATAACAGAGTAAAATAAAGTCAAATGTATGAACATTATAGATTTTCTAATGTGTGGCTCAGGTTTCGAGGTTAAGGTAATAACACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTGATTTTTTTCTTTTCACAACTACAATATCATTTCTTCAATATTCTTGCAGAATCAATATCTATCTTTTAGTGGTGTAGTATTCGGATTAGCAAACCATATCTTCAGTTGAAGTGTGTTTGACTTGCTGATTCGTTTATCACATTTTATGGTGTCAGTATGAATTGAGAGTTCATTTTTATCTGAGAGAGAGAGAGAGAGAGGAAAAGATGTGTTCACATTGTAGACTTCGCGGAAATGAATTCCAATCTCTGATGTCAGCCAACAAGAATGGCATTAAGATTGTTCATGTAAGAAATCCTAGAAGGCTGAATGATACTTGGTGAACGTTCACTTGCAATTCTCAAAAGATTGTTGGTCCATTGATGCTACTTTGTATCAGAATCTCAGAAGCTTAAAGAAAATGATATATGCACGTGCACCTTTTGCAGTAGTAGCCGGACTTAGAATTGGTTAGCATAAGATTATTTTAATTCGCATACACAGTTTAGTGATTAGGTCTCTCTTTGAAAGACAGAACTGAGTTTGAGGGGTGGAATTTCCAGGAACTTCAGAAGATCCCTGGAAATGTATGAAAAGTGTTTCTTGGTTTCATATTAATAATTGTAAGAACAATTTGAATGTTGGTAAAAATAATTCACCAACCTCAATATGAACAGCTGATTTTGTAATAAGTGATCGTTGCATGTTTTTGACATTAGTGAAGTTTCCTGGTGTACATTGTGAATGTGAAGTTCCTTTCAGGTGATCTTTCACTATGTTGGCTATAATGAATCGGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCGGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGTAGTTAAATCATGCCCCTTTATCACCACACACAAGAGAGGAAAAAAAAAAAAAAACTCTCACCAATCTTGTAAAAGCAAGAAGAAATTTATATACAGTTGAAAATAATCAGATAGCATCTGAGAGAAAAATATTGCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATAATAATCCCACCAGAACTTGGACCACCTGTGAGTTCTCAAGCATATGATCATTGTTTCAGTTATATATGTGATCTTAAATTTCTTGTAACTGATGGTTATATAGGCAGCAATTTTTATTCATGCAAGGAAAGACCACACCCATAATTTGACCTCCCATTTGCTGCAGTTGTATTTACACGTGATAGAATTCATCTCCAGCTAGACAAGCCTCTATCTTTTACCATGAGATTGTTTATATAGATAATTAAATGATGTTTTCTTGCTTGGCAGAATACTAGAATCTCAATAGGAGAGAACACACCGATATTGGAGAAGAACACACTAGGTTGGGGCAGATTAGAAAGTTGCCCACTCAAAGTAAAGGAATCCCGGCAGGCATTAGCAAACAAGTTGAACTAAATAAGAGGACAAATATAAGTGTACAACAGGTGAAAGAAAATCAACTCAAGAAGAAAATATGATTACAAAAGTTTCCTCAAAACAATTGTTGCAAAAAGTTAGTCTTCGATAAAAAAAAAACCCTTAAAAACATAGGAGTGATTGATTGTGAAAACTGAAAAACCTTCGAAATACACCCAGAATAACCCTCAAAGCTTGGACTCTCTAAAACTTTCCCCCTTGTGTACAATAAAGGTTTTGTGTTTCTTATGGAGTGAATTTCCATTTTCCAGATAATAGAACTTACTAATCTAGGAAATCTTAGTTCTATATTTAAACCAGTGACCACAAACTAGATGTTTTAAAAATCTTGAAGCTTGTTGGAGAAGCGCTACGATGGATGTAATTCCTTTTGGAGTTTATTTGCAGATTTCTTCATGCTACATTGGTAAAATAGGCTCTCTGGATCTTCATTCTCAGTAGAAACACTAACGTGGAGAAAGGCCAAAGAAGGAAATGACTTTTTGGACCCAATCAGTTATGTTGACCCCTCATGCTAAGGGCCAGATGAAGAATTCAATATCTTTAGAATTTCTTTCTAAGTAGTAAATAATTTGGATGGTTGAGAAGATCGAGGTTGCCATTCTTGATCGACAATTTTCAATACTGAATATCTGAACCACTTTTGTTCACCTTCCTGTTATTTTTGTTTGACAAAACTATGTGAATGGCAATGCGATTGCCAACTAACGAATCTAGGAGGGGGATGGGGGGTGGGGAGTGGGTGAGAACGAGTTATCTAGAGATCCACTCATCTTCCCAAGAAGAAATATTGTCACTCTTATAGTTTCACAAAGATTTTATTTTCAAAAATGAATCTCCTAGAACTTTTTTACTTAAGACCTCTTCTTTTGGCACAACAAATCTCCCTTAAGAACCTCATAAAGTCATACTTGCAACCTCATATTTCCGCACTAGAGTTCTTTGCTGCACTCTCTAAAATTTTCTACCATGTAGATGCAACAACCACTTTTTTCTGTATCAAATTATCTTGAACCTAAACCTCCAACGATCAAATGAATAATTGAACTCCATTGAATTAAGTGAATTCCTCGTTCAGTTCATAGCTTCCTTTGCATAGTCATTCATACTTTTCTCTCGTCTTCCCATGGGAACCTTTTTGGAATGAATGAAATTTCTTCTTAAATATATATAACTCGACGCTCATTCTTCTTGCACGTATGAATGGGAAGCTTGTGATTAAATTCAAAGAGAACTGCAGAAGTGCGTGGTTCGAGAGCATATTGCCTTGTCATAGGGCCACACAATCCTTCTTTGTCCATTCTTATATGCCAGTCTCTGAAACTGGATTTTGGTAGTTTTCTGCCCCACTTATTTTGTGCATTCTTTTTCCATGCAAGTAAGACAAAGGAAGAATTCTGGATCTCAGTTATCTAATCAGATATGCAGATAAACTTCATTCTTTTGCCTTGAAGTAAATATTTTTTCACTGTTCCCATATCTAGAAAAACGAATGAATAGGGATACCCATGTCTGTCTAGTTTAAATTTAAAAGGCAGAATGCTTGCATTAATGTTTACTTGTTTGCTTACCTTGATGCCTGATGGGGTCACCATTTTTTACGTTTCTGTGACTAAATACTAATGTGATGTTTGATGATCTAGCTCAATTGATTTGACTTTTTGATTATCTACAGGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGATATTGTTTGCAGCTAGGAGTTGAAGGTTGTCATTTTGAGGTACACATTGATCTTTGAGATGAAACACCTTGAAACATCCATACTGCACAATGTATATGCTGATGAACTTTTCTGAGGAACCTTTTGGAAAACAACCATCAATTCCTCTCCACCCCCACCCCAAGTGAGATGTTTTTACAGTGATTGATCAATTAGATTAAATATCAGATTACCAAGTGGCTTGTTTTTCTCCCCCTCTCTCTCACCTTCTGCATAATAT ATTCACATTGAATTTTGCTCTAAATTGAGTTTGCTCTTAATACAACTCAGATTATCAATGTCTTTTGGCATCTGCTTCGTATCGTCTTGTTTGCCTTGCTCAATAGTTGCTTGTAGAAGAGGAGTGCGATTTATCGTCTTTAGCGGGGCATTTTCCGGATATGCAACATCAAGAGCTTTCATAACTCAAATCAAGCAAGTACAGCGCCACTGCTCGTGTCAGAGTTTCAATCACAGCAGCAAAGATAATTCTTATATATCATTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTATTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCGTTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAATAAACGGAGACAAAAAGAAAACAATGCCCCTGATGACTTTCCAAGCTTTGTCAGGGAAGGTTTCGAGGTTAAGGTAATAACACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTTGGCTATAATGAATCGGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCGGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATAATAATCCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGATATTGTTTGCAGCTAGGAGTTGAAGGTTGTCATTTTGAGGTACACATTGATCTTTGAGATGAAACACCTTGAAACATCCATACTGCACAATGTATATGCTGATGAACTTTTCTGAGGAACCTTTTGGAAAACAACCATCAATTCCTCTCCACCCCCACCCCAAGTGAGATGTTTTTACAGTGATTGATCAATTAGATTAAATATCAGATTACCAAGTGGCTTGTTTTTCTCCCCCTCTCTCTCACCTTCTGCATAATAT ATGTCTTTTGGCATCTGCTTCGTATCGTCTTGTTTGCCTTGCTCAATAGTTGCTTGTAGAAGAGGAGTGCGATTTATCGTCTTTAGCGGGGCATTTTCCGGATATGCAACATCAAGAGCTTTCATAACTCAAATCAAGCAAGTACAGCGCCACTGCTCGTGTCAGAGTTTCAATCACAGCAGCAAAGATAATTCTTATATATCATTATCCAATGAGAATTCCAGGCGAAAGATTCTCCTATTTTTCTTATCAACTACAGCTTTATTTCCCACTCGGCGTTCTTCTGCCAAGACAAAGAATAAGAATCCATACGATGAAAGACGCTTACTAGAGCAAAATAAACGGAGACAAAAAGAAAACAATGCCCCTGATGACTTTCCAAGCTTTGTCAGGGAAGGTTTCGAGGTTAAGGTAATAACACCAGAGTCCTATGTCAAACGTGACTCTGGGCTCATATATTGGGATATCGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGATCTTTCACTATGTTGGCTATAATGAATCGGGTCGTCGAATTGATAGCACATACTTACAGGGTTCTCCGGCCAGAATCCGTGTGGGCACAAATGCATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAAAGGAGAATAATAATCCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAACAGTTTGAAGTCTTTGATGTGGAACTGTTAAGCGTCCAAGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGATATTGTTTGCAGCTAG MSFGICFVSSCLPCSIVACRRGVRFIVFSGAFSGYATSRAFITQIKQVQRHCSCQSFNHSSKDNSYISLSNENSRRKILLFFLSTTALFPTRRSSAKTKNKNPYDERRLLEQNKRRQKENNAPDDFPSFVREGFEVKVITPESYVKRDSGLIYWDIEVGNGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRVGTNALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCS Homology
BLAST of MELO3C005979.jh1.t2 vs. NCBI nr
Match: XP_008437821.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]) HSP 1 Score: 484 bits (1247), Expect = 7.92e-172 Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. NCBI nr
Match: XP_038891578.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X3 [Benincasa hispida]) HSP 1 Score: 464 bits (1195), Expect = 6.42e-164 Identity = 229/240 (95.42%), Postives = 235/240 (97.92%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. NCBI nr
Match: XP_038891572.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 464 bits (1195), Expect = 7.70e-164 Identity = 229/240 (95.42%), Postives = 235/240 (97.92%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. NCBI nr
Match: XP_004133781.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis sativus] >KGN56374.1 hypothetical protein Csa_010638 [Cucumis sativus]) HSP 1 Score: 463 bits (1192), Expect = 1.91e-163 Identity = 230/240 (95.83%), Postives = 235/240 (97.92%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. NCBI nr
Match: XP_038891581.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X4 [Benincasa hispida]) HSP 1 Score: 460 bits (1184), Expect = 2.94e-162 Identity = 229/240 (95.42%), Postives = 235/240 (97.92%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q0WRJ7 (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP20-2 PE=1 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 1.9e-83 Identity = 154/218 (70.64%), Postives = 176/218 (80.73%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy Swiss-Prot
Match: P65765 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O157:H7 OX=83334 GN=fkpA PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14 Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy Swiss-Prot
Match: P65764 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=fkpA PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14 Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy Swiss-Prot
Match: P45523 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli (strain K12) OX=83333 GN=fkpA PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14 Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy Swiss-Prot
Match: O22870 (Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-3 PE=1 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 9.4e-14 Identity = 62/200 (31.00%), Postives = 92/200 (46.00%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy TrEMBL
Match: A0A1S3AVI8 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103483136 PE=4 SV=1) HSP 1 Score: 484 bits (1247), Expect = 3.84e-172 Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy TrEMBL
Match: A0A0A0L5Q7 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_3G118090 PE=4 SV=1) HSP 1 Score: 463 bits (1192), Expect = 9.24e-164 Identity = 230/240 (95.83%), Postives = 235/240 (97.92%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1IWW5 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111479210 PE=4 SV=1) HSP 1 Score: 440 bits (1131), Expect = 1.75e-154 Identity = 219/240 (91.25%), Postives = 226/240 (94.17%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1E9D1 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111431911 PE=4 SV=1) HSP 1 Score: 435 bits (1119), Expect = 1.18e-152 Identity = 218/240 (90.83%), Postives = 224/240 (93.33%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. ExPASy TrEMBL
Match: A0A6J1DHQ6 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111021016 PE=4 SV=1) HSP 1 Score: 413 bits (1061), Expect = 8.03e-144 Identity = 204/240 (85.00%), Postives = 219/240 (91.25%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. TAIR 10
Match: AT3G60370.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 310.5 bits (794), Expect = 1.4e-84 Identity = 154/218 (70.64%), Postives = 176/218 (80.73%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. TAIR 10
Match: AT2G43560.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 79.0 bits (193), Expect = 6.7e-15 Identity = 62/200 (31.00%), Postives = 92/200 (46.00%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. TAIR 10
Match: AT4G19830.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 70.5 bits (171), Expect = 2.4e-12 Identity = 45/158 (28.48%), Postives = 70/158 (44.30%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. TAIR 10
Match: AT5G13410.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 68.6 bits (166), Expect = 9.0e-12 Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 0
BLAST of MELO3C005979.jh1.t2 vs. TAIR 10
Match: AT5G45680.1 (FK506-binding protein 13 ) HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11 Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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