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MELO3C005972.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AGCAACCTCCTTTTCTCACTCGCCCTCTATCACAACCCATCATGAATACCAACACCTTTCTTCTAAGAACACAAAACAAAGGACGACTATTCAACGAAACAGAGACCACCCTATGTTCAGAGGAGTTCGTAAACGAAATTGGGGAAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACTAGAATTTGGCTTGGAACATACCCAACACCGGAAATGGCAGCTCGAGCCCATGACGCCGCTGCCCTCGCCATTAAAGGTCACTCTGCTTTTCTCAATTTCCCAGAATTGGCCCAATTCCTTCCTCGCCCGCTTTCCAGGTCCCATAAGGACATTCAGGCTGCCGCGGCACAGGCAGCGGCCGCCACATTTTCTTCCGGAATCAACGCTGAAAGTGGAGGAGAGGAAGCGGTGGAGGAGAGCAGGGAGCCTCTGTTTCCTGGAAGCGATGGGGGAGAGAGAACAGAGGATTCCACAAACTCACCGTCGACGATAGCCGGTGATGAGACATTGTTCGATTTGCCTGATTTGGTCATCGGTAGTTCTGATTCAAAAGATGGGTTTGTTTATCATTCTTCGTTGTGGCAGTTTTGTGCGGCGGCCGATCATAATGGTTTTCGGCTGGAAGAGCCTTCATTCTGGGAACTCATTTAAGTTCAAAATTTGTGTTCATTTTTCTTCACTCCATCAAAA AGCAACCTCCTTTTCTCACTCGCCCTCTATCACAACCCATCATGAATACCAACACCTTTCTTCTAAGAACACAAAACAAAGGACGACTATTCAACGAAACAGAGACCACCCTATGTTCAGAGGAGTTCGTAAACGAAATTGGGGAAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACTAGAATTTGGCTTGGAACATACCCAACACCGGAAATGGCAGCTCGAGCCCATGACGCCGCTGCCCTCGCCATTAAAGGTCACTCTGCTTTTCTCAATTTCCCAGAATTGGCCCAATTCCTTCCTCGCCCGCTTTCCAGGTCCCATAAGGACATTCAGGCTGCCGCGGCACAGGCAGCGGCCGCCACATTTTCTTCCGGAATCAACGCTGAAAGTGGAGGAGAGGAAGCGGTGGAGGAGAGCAGGGAGCCTCTGTTTCCTGGAAGCGATGGGGGAGAGAGAACAGAGGATTCCACAAACTCACCGTCGACGATAGCCGGTGATGAGACATTGTTCGATTTGCCTGATTTGGTCATCGGTAGTTCTGATTCAAAAGATGGGTTTGTTTATCATTCTTCGTTGTGGCAGTTTTGTGCGGCGGCCGATCATAATGGTTTTCGGCTGGAAGAGCCTTCATTCTGGGAACTCATTTAAGTTCAAAATTTGTGTTCATTTTTCTTCACTCCATCAAAA ATGTTCAGAGGAGTTCGTAAACGAAATTGGGGAAAATGGGTCTCTGAGATTCGCGAGCCAAGGAAGAAGACTAGAATTTGGCTTGGAACATACCCAACACCGGAAATGGCAGCTCGAGCCCATGACGCCGCTGCCCTCGCCATTAAAGGTCACTCTGCTTTTCTCAATTTCCCAGAATTGGCCCAATTCCTTCCTCGCCCGCTTTCCAGGTCCCATAAGGACATTCAGGCTGCCGCGGCACAGGCAGCGGCCGCCACATTTTCTTCCGGAATCAACGCTGAAAGTGGAGGAGAGGAAGCGGTGGAGGAGAGCAGGGAGCCTCTGTTTCCTGGAAGCGATGGGGGAGAGAGAACAGAGGATTCCACAAACTCACCGTCGACGATAGCCGGTGATGAGACATTGTTCGATTTGCCTGATTTGGTCATCGGTAGTTCTGATTCAAAAGATGGGTTTGTTTATCATTCTTCGTTGTGGCAGTTTTGTGCGGCGGCCGATCATAATGGTTTTCGGCTGGAAGAGCCTTCATTCTGGGAACTCATTTAA MFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLSRSHKDIQAAAAQAAAATFSSGINAESGGEEAVEESREPLFPGSDGGERTEDSTNSPSTIAGDETLFDLPDLVIGSSDSKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI Homology
BLAST of MELO3C005972.jh1.t1 vs. NCBI nr
Match: XP_008437812.1 (PREDICTED: ethylene-responsive transcription factor ERF038-like [Cucumis melo] >KAA0048837.1 ethylene-responsive transcription factor ERF038-like protein [Cucumis melo var. makuwa] >TYK20789.1 ethylene-responsive transcription factor ERF038-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 358 bits (920), Expect = 5.01e-124 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. NCBI nr
Match: XP_004134290.1 (ethylene-responsive transcription factor ERF039 [Cucumis sativus] >KGN56366.1 hypothetical protein Csa_009791 [Cucumis sativus]) HSP 1 Score: 343 bits (880), Expect = 6.03e-118 Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. NCBI nr
Match: XP_038902557.1 (ethylene-responsive transcription factor ERF034-like [Benincasa hispida]) HSP 1 Score: 317 bits (812), Expect = 1.28e-107 Identity = 160/180 (88.89%), Postives = 165/180 (91.67%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. NCBI nr
Match: KAG6597034.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028511.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 301 bits (772), Expect = 1.70e-101 Identity = 154/180 (85.56%), Postives = 160/180 (88.89%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. NCBI nr
Match: XP_022944766.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita moschata]) HSP 1 Score: 301 bits (772), Expect = 4.26e-101 Identity = 154/180 (85.56%), Postives = 160/180 (88.89%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2) HSP 1 Score: 159.5 bits (402), Expect = 3.7e-38 Identity = 102/196 (52.04%), Postives = 120/196 (61.22%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.2e-35 Identity = 94/186 (50.54%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.3e-32 Identity = 85/151 (56.29%), Postives = 97/151 (64.24%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 8.7e-32 Identity = 90/191 (47.12%), Postives = 107/191 (56.02%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.3e-31 Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7U3G9 (Ethylene-responsive transcription factor ERF038-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00500 PE=4 SV=1) HSP 1 Score: 358 bits (920), Expect = 2.43e-124 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3AV07 (ethylene-responsive transcription factor ERF038-like OS=Cucumis melo OX=3656 GN=LOC103483130 PE=4 SV=1) HSP 1 Score: 358 bits (920), Expect = 2.43e-124 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0L8C6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G118010 PE=4 SV=1) HSP 1 Score: 343 bits (880), Expect = 2.92e-118 Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1FZ02 (ethylene-responsive transcription factor ERF038-like OS=Cucurbita moschata OX=3662 GN=LOC111449118 PE=4 SV=1) HSP 1 Score: 301 bits (772), Expect = 2.06e-101 Identity = 154/180 (85.56%), Postives = 160/180 (88.89%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1EFJ7 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111432063 PE=4 SV=1) HSP 1 Score: 300 bits (768), Expect = 3.70e-101 Identity = 153/180 (85.00%), Postives = 161/180 (89.44%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 159.5 bits (402), Expect = 2.6e-39 Identity = 102/196 (52.04%), Postives = 120/196 (61.22%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36 Identity = 94/186 (50.54%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 ) HSP 1 Score: 141.0 bits (354), Expect = 9.6e-34 Identity = 85/151 (56.29%), Postives = 97/151 (64.24%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 138.3 bits (347), Expect = 6.2e-33 Identity = 90/191 (47.12%), Postives = 107/191 (56.02%), Query Frame = 0
BLAST of MELO3C005972.jh1.t1 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 136.3 bits (342), Expect = 2.4e-32 Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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