MELO3C005941.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO3C005941.jh1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	AP2/ERF domain-containing protein
Location	chr06: 586317 .. 587003 (-)
Sequence length	687
RNA-Seq Expression	MELO3C005941.jh1.t1
Synteny	MELO3C005941.jh1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACAGAGAATACACAGTGTGGTAGTGTGGTTCCTTCTAATAACAATAAACCAAAGAAGAATTAGAAGCAGAAAAATCATGTTGAGCAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCTTTTGGAGCAGATTCGGCGGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACCAATAATAATGTTGAGGATGGAATAATAAGGTATGATATTAGTTGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAAGAGAAGTCTCGGCCTCGGCCCCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCTAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTAATTAACTCCAAATTCAACTTATTCTACTCTTCCGTTCCATCACCCTTTTATTTCTCAACCTGGCCCTTCACAAATTATAATCTCCATTATTTTCTATCTCTACATATATATTAAGATCAGTCATCTCCAT

mRNA sequence

ATACAGAGAATACACAGTGTGGTAGTGTGGTTCCTTCTAATAACAATAAACCAAAGAAGAATTAGAAGCAGAAAAATCATGTTGAGCAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCTTTTGGAGCAGATTCGGCGGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACCAATAATAATGTTGAGGATGGAATAATAAGGTATGATATTAGTTGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAAGAGAAGTCTCGGCCTCGGCCCCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCTAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTAATTAACTCCAAATTCAACTTATTCTACTCTTCCGTTCCATCACCCTTTTATTTCTCAACCTGGCCCTTCACAAATTATAATCTCCATTATTTTCTATCTCTACATATATATTAAGATCAGTCATCTCCAT

Coding sequence (CDS)

ATGTTGAGCAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCTTTTGGAGCAGATTCGGCGGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACCAATAATAATGTTGAGGATGGAATAATAAGGTATGATATTAGTTGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAAGAGAAGTCTCGGCCTCGGCCCCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCTAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTAA

Protein sequence

MLSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN

Homology

[Close]

BLAST of MELO3C005941.jh1.t1 vs. NCBI nr
Match: KAA0048804.1 (putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa] >TYK20756.1 putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (764), Expect = 9.34e-102
Identity = 153/157 (97.45%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 3   SSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNN 62
           SSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNN
Sbjct: 4   SSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNN 63

Query: 63  NNNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWL 122
           NNNNMVDQMSSIIIRDNPEEKSRPR    GLQFRGVRRRPWGKYAAEIRDPSRKGARIWL
Sbjct: 64  NNNNMVDQMSSIIIRDNPEEKSRPR----GLQFRGVRRRPWGKYAAEIRDPSRKGARIWL 123

Query: 123 GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 159
           GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 124 GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156

[Close]

BLAST of MELO3C005941.jh1.t1 vs. NCBI nr
Match: XP_004134277.2 (ethylene-responsive transcription factor 1 [Cucumis sativus])

HSP 1 Score: 284 bits (726), Expect = 1.69e-95
Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 4   SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNN 63
           SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMSNNN
Sbjct: 33  SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNN 92

Query: 64  NNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLG 123
           NN MVDQMSSIIIRDNPEEKS+PRPR  GLQFRGVRRRPWGKYAAEIRDPS+KGARIWLG
Sbjct: 93  NN-MVDQMSSIIIRDNPEEKSQPRPR--GLQFRGVRRRPWGKYAAEIRDPSKKGARIWLG 152

Query: 124 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 159
           TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 153 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 185

[Close]

BLAST of MELO3C005941.jh1.t1 vs. NCBI nr
Match: KAE8650208.1 (hypothetical protein Csa_010866 [Cucumis sativus])

HSP 1 Score: 219 bits (557), Expect = 1.30e-70
Identity = 120/156 (76.92%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 4   SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNN 63
           SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIR                
Sbjct: 3   SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIR---------------- 62

Query: 64  NNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLG 123
                         DNPEEKS+PRPR  GLQFRGVRRRPWGKYAAEIRDPS+KGARIWLG
Sbjct: 63  --------------DNPEEKSQPRPR--GLQFRGVRRRPWGKYAAEIRDPSKKGARIWLG 122

Query: 124 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 159
           TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 123 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 126

[Close]

BLAST of MELO3C005941.jh1.t1 vs. NCBI nr
Match: XP_022974259.1 (ethylene-responsive transcription factor 13-like [Cucurbita maxima])

HSP 1 Score: 151 bits (382), Expect = 1.90e-43
Identity = 91/160 (56.88%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 2   LSSSSSSSLEGSSSDLFLLEQIRRHLLEDDL----GKGSTNNNVEDGIIRYDISCSGAGW 61
           +SS+S+ S   SSS++FLLE IRRHLLED+L    G G    +++ G    DI   G G 
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGVTDIEAPGKG- 60

Query: 62  EMSNNNNNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKG 121
                         SSI                RGLQFRGVRRRPWGKYAAEIRDP+RKG
Sbjct: 61  --------------SSI----------------RGLQFRGVRRRPWGKYAAEIRDPNRKG 120

Query: 122 ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 157
           ARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 ARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]

BLAST of MELO3C005941.jh1.t1 vs. NCBI nr
Match: XP_022950239.1 (ethylene-responsive transcription factor 1-like [Cucurbita moschata])

HSP 1 Score: 150 bits (380), Expect = 4.19e-43
Identity = 92/162 (56.79%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 2   LSSSSSSSLEGSSSDLFLLEQIRRHLLEDDL------GKGSTNNNVEDGIIRYDISCSGA 61
           +SS+S+ S   SSS++FLLE IRRHLLED+L      GK + +    DG+   DI   G 
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVT--DIEAPGK 60

Query: 62  GWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSR 121
           G               SSI                RGLQFRGVRRRPWGKYAAEIRDP+R
Sbjct: 61  G---------------SSI----------------RGLQFRGVRRRPWGKYAAEIRDPNR 120

Query: 122 KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 157
           KGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 KGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.5e-27
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 0


Query: 79  NPEEKSRP---------RPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQ 138
           +P E+++P          PR +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +
Sbjct: 67  SPAEENKPPATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPE 126

Query: 139 DAALAYDRAAFQMRGAKAKLNFPHIISS 158
           DAA+AYDRAAFQ+RG+KAKLNFPH+I S
Sbjct: 127 DAAVAYDRAAFQLRGSKAKLNFPHLIGS 154

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9LW50 (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 48/69 (69.57%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 90  PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKL 149
           P+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY TA++AALAYD+AA++MRG+KA L
Sbjct: 98  PKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALL 157

Query: 150 NFPHIISSN 159
           NFPH I  N
Sbjct: 158 NFPHRIGLN 166

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q40479 (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 48/69 (69.57%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 90  PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKL 149
           P+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY TA++AALAYD+AA++MRG+KA L
Sbjct: 94  PKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALL 153

Query: 150 NFPHIISSN 159
           NFPH I  N
Sbjct: 154 NFPHRIGLN 162

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.5e-23
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 56  GWEMSNNNNNNM-VDQMSSIIIRDNPEEKSRPRPR-PRGLQFRGVRRRPWGKYAAEIRDP 115
           GW   N +   +  +Q    I+    E  + P    PRG  +RGVRRRPWGK+AAEIRDP
Sbjct: 64  GWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDP 123

Query: 116 SRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 159
           ++ GAR+WLGTY T ++AA+AYD+AA++MRG+KA LNFPH I  N
Sbjct: 124 AKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLN 168

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q84XB3 (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 47/70 (67.14%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 89  RPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAK 148
           +P+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY +A++AALAY +AAF+MRG KA 
Sbjct: 101 QPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKAL 160

Query: 149 LNFPHIISSN 159
           LNFPH I  N
Sbjct: 161 LNFPHRIGLN 170

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3DAY8 (Putative Ethylene-responsive element binding factor 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00160 PE=4 SV=1)

HSP 1 Score: 298 bits (764), Expect = 4.52e-102
Identity = 153/157 (97.45%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 3   SSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNN 62
           SSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNN
Sbjct: 4   SSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNN 63

Query: 63  NNNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWL 122
           NNNNMVDQMSSIIIRDNPEEKSRPR    GLQFRGVRRRPWGKYAAEIRDPSRKGARIWL
Sbjct: 64  NNNNMVDQMSSIIIRDNPEEKSRPR----GLQFRGVRRRPWGKYAAEIRDPSRKGARIWL 123

Query: 123 GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 159
           GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 124 GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0L893 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 2.92e-96
Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 4   SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNN 63
           SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMSNNN
Sbjct: 3   SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNN 62

Query: 64  NNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLG 123
           NN MVDQMSSIIIRDNPEEKS+PRPR  GLQFRGVRRRPWGKYAAEIRDPS+KGARIWLG
Sbjct: 63  NN-MVDQMSSIIIRDNPEEKSQPRPR--GLQFRGVRRRPWGKYAAEIRDPSKKGARIWLG 122

Query: 124 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 159
           TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 123 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 155

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1IH30 (ethylene-responsive transcription factor 13-like OS=Cucurbita maxima OX=3661 GN=LOC111472899 PE=4 SV=1)

HSP 1 Score: 151 bits (382), Expect = 9.22e-44
Identity = 91/160 (56.88%), Postives = 104/160 (65.00%), Query Frame = 0


Query: 2   LSSSSSSSLEGSSSDLFLLEQIRRHLLEDDL----GKGSTNNNVEDGIIRYDISCSGAGW 61
           +SS+S+ S   SSS++FLLE IRRHLLED+L    G G    +++ G    DI   G G 
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGVTDIEAPGKG- 60

Query: 62  EMSNNNNNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKG 121
                         SSI                RGLQFRGVRRRPWGKYAAEIRDP+RKG
Sbjct: 61  --------------SSI----------------RGLQFRGVRRRPWGKYAAEIRDPNRKG 120

Query: 122 ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 157
           ARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 ARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1GF81 (ethylene-responsive transcription factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453384 PE=4 SV=1)

HSP 1 Score: 150 bits (380), Expect = 2.03e-43
Identity = 92/162 (56.79%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 2   LSSSSSSSLEGSSSDLFLLEQIRRHLLEDDL------GKGSTNNNVEDGIIRYDISCSGA 61
           +SS+S+ S   SSS++FLLE IRRHLLED+L      GK + +    DG+   DI   G 
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVT--DIEAPGK 60

Query: 62  GWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSR 121
           G               SSI                RGLQFRGVRRRPWGKYAAEIRDP+R
Sbjct: 61  G---------------SSI----------------RGLQFRGVRRRPWGKYAAEIRDPNR 120

Query: 122 KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 157
           KGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 KGARIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6J1A158 (ethylene-responsive transcription factor 13-like OS=Herrania umbratica OX=108875 GN=LOC110414127 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 1.08e-36
Identity = 68/111 (61.26%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 55  AGWEMSNNNNNNM---VDQMSSIIIRDNPEEKSRPRPR----PRGLQFRGVRRRPWGKYA 114
           +GW  SN  +N     ++++ S   R+  +E+S+ +P     PRG+ F+GVRRRPWGKYA
Sbjct: 83  SGWSPSNEVDNYTPVAIEELVSTTTREVEKEESKVKPETSVPPRGMHFKGVRRRPWGKYA 142

Query: 115 AEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 158
           AEIRDP R GARIWLGTY T +DAALAYDRAAF+MRGAKAKLNFPH+I SN
Sbjct: 143 AEIRDPKRNGARIWLGTYETPEDAALAYDRAAFKMRGAKAKLNFPHLIGSN 193

[Close]

BLAST of MELO3C005941.jh1.t1 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 121.7 bits (304), Expect = 5.3e-28
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 0


Query: 79  NPEEKSRP---------RPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQ 138
           +P E+++P          PR +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +
Sbjct: 67  SPAEENKPPATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPE 126

Query: 139 DAALAYDRAAFQMRGAKAKLNFPHIISS 158
           DAA+AYDRAAFQ+RG+KAKLNFPH+I S
Sbjct: 127 DAAVAYDRAAFQLRGSKAKLNFPHLIGS 154

[Close]

BLAST of MELO3C005941.jh1.t1 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 104.4 bits (259), Expect = 8.8e-23
Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 56  GWEMSNNNNNNMVDQMSSIIIR---------DNPEEKSRPRP------RPRGLQFRGVRR 115
           GWE S+++++       S+ I            P +K +  P        +G  +RGVR+
Sbjct: 94  GWEPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQ 153

Query: 116 RPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 158
           RPWGK+AAEIRDP++ GAR+WLGT+ TA+DAALAYDRAAF+MRG++A LNFP  ++S
Sbjct: 154 RPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNS 210

[Close]

BLAST of MELO3C005941.jh1.t1 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-22
Identity = 45/61 (73.77%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 93  LQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFP 152
           +++RGVR+RPWGKYAAEIRD +R GAR+WLGT++TA+DAA AYDRAAF MRG +A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

Query: 153 H 154
           H
Sbjct: 72  H 72

[Close]

BLAST of MELO3C005941.jh1.t1 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 9.7e-22
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 69  DQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTA 128
           DQ SS+ +    +EKS  R R     +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA
Sbjct: 52  DQSSSLTL----QEKSNSRQR----NYRGVRQRPWGKWAAEIRDPN-KAARVWLGTFDTA 111

Query: 129 QDAALAYDRAAFQMRGAKAKLNFPHIISSN 159
           ++AALAYD+AAF+ RG KAKLNFP  I  N
Sbjct: 112 EEAALAYDKAAFEFRGHKAKLNFPEHIRVN 132

[Close]

BLAST of MELO3C005941.jh1.t1 vs. TAIR 10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 9.7e-22
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 69  DQMSSIIIRDNPEEKSRPRPRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTA 128
           DQ SS+ +    +EKS  R R     +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA
Sbjct: 52  DQSSSLTL----QEKSNSRQR----NYRGVRQRPWGKWAAEIRDPN-KAARVWLGTFDTA 111

Query: 129 QDAALAYDRAAFQMRGAKAKLNFPHIISSN 159
           ++AALAYD+AAF+ RG KAKLNFP  I  N
Sbjct: 112 EEAALAYDKAAFEFRGHKAKLNFPEHIRVN 132

The following BLAST results are available for this feature:

BLAST of MELO3C005941.jh1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048804.1	9.34e-102	97.45	putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa...	[more]
XP_004134277.2	1.69e-95	94.87	ethylene-responsive transcription factor 1 [Cucumis sativus]	[more]
KAE8650208.1	1.30e-70	76.92	hypothetical protein Csa_010866 [Cucumis sativus]	[more]
XP_022974259.1	1.90e-43	56.88	ethylene-responsive transcription factor 13-like [Cucurbita maxima]	[more]
XP_022950239.1	4.19e-43	56.79	ethylene-responsive transcription factor 1-like [Cucurbita moschata]	[more]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K1	7.5e-27	63.64	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LW50	1.3e-23	69.57	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q40479	1.3e-23	69.57	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 ...	[more]
Q40476	8.5e-23	52.38	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ...	[more]
Q84XB3	1.1e-22	67.14	Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ER...	[more]

BLAST of MELO3C005941.jh1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DAY8	4.52e-102	97.45	Putative Ethylene-responsive element binding factor 13 OS=Cucumis melo var. maku...	[more]
A0A0A0L893	2.92e-96	94.87	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=...	[more]
A0A6J1IH30	9.22e-44	56.88	ethylene-responsive transcription factor 13-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GF81	2.03e-43	56.79	ethylene-responsive transcription factor 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1A158	1.08e-36	61.26	ethylene-responsive transcription factor 13-like OS=Herrania umbratica OX=108875...	[more]

BLAST of MELO3C005941.jh1.t1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44840.1	5.3e-28	63.64	ethylene-responsive element binding factor 13	[more]
AT4G17500.1	8.8e-23	47.01	ethylene responsive element binding factor 1	[more]
AT3G23220.1	4.3e-22	73.77	Integrase-type DNA-binding superfamily protein	[more]
AT2G33710.1	9.7e-22	60.00	Integrase-type DNA-binding superfamily protein	[more]
AT2G33710.2	9.7e-22	60.00	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 95..106 score: 65.91 coord: 134..154 score: 56.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 94..158 e-value: 7.9E-35 score: 131.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 95..144 e-value: 7.3E-14 score: 51.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 94..152 score: 23.182409
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 94..153 e-value: 6.88075E-29 score: 99.2682
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 93..154 e-value: 3.4E-28 score: 99.5
None	No IPR available	PANTHER	PTHR31190:SF236	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13-LIKE	coord: 67..154
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 67..154
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 95..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C005941.jh1	MELO3C005941.jh1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C005941.jh1.t1.exon	MELO3C005941.jh1.t1.exon	exon

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C005941.jh1.t1.stop_codon	MELO3C005941.jh1.t1.stop_codon	stop_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C005941.jh1.t1.cds	MELO3C005941.jh1.t1.cds	CDS

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C005941.jh1.t1.start_codon	MELO3C005941.jh1.t1.start_codon	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C005941.jh1.t1	MELO3C005941.jh1.t1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity