MELO3C004868.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C004868.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Histone H2B
Location	chr12: 8278023 .. 8278513 (-)
Sequence length	491
RNA-Seq Expression	MELO3C004868.1
Synteny	MELO3C004868.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGATATTGGAATCTCCAGCAAAGCCATGGGTATTATGAACAGTTTTATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAAAAGCCGACCATAACCTCTCGGGAGATCCAAACGGCTGTGCGCCTTGTTCTTCCTGGTGAGTTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTTACTAGCTCTTAGATTCACAGATTAGGGTTTTCTTGTGTAAAAAGCGGCCTGATTGTTCTGAATCGTTGACTTAGCTTCCTTTTTGTTGCATATTTTGGAATCAATTGAATGAAAAGTCGGTTTTTGTTAAGCGATTTCTCTATTTTCCTTCTTAATTTTATATTGTACTCTGTCCAATGGAACTCTGAAGATTGCTTCCTCTTTTGTCTATGGCTTGATGAGTTCATGTAGTCGCGCATTTTTAGCAATTAAAATCGAAATTTTAAATTCTTTTC

mRNA sequence

CCCGATATTGGAATCTCCAGCAAAGCCATGGGTATTATGAACAGTTTTATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAAAAGCCGACCATAACCTCTCGGGAGATCCAAACGGCTGTGCGCCTTGTTCTTCCTGGTGAGTTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTTACTAGCTCTTAGATTCACAGATTAGGGTTTTCTTGTGTAAAAAGCGGCCTGATTGTTCTGAATCGTTGACTTAGCTTCCTTTTTGTTGCATATTTTGGAATCAATTGAATGAAAAGTCGGTTTTTGTTAAGCGATTTCTCTATTTTCCTTCTTAATTTTATATTGTACTCTGTCCAATGGAACTCTGAAGATTGCTTCCTCTTTTGTCTATGGCTTGATGAGTTCATGTAGTCGCGCATTTTTAGCAATTAAAATCGAAATTTTAAATTCTTTTC

Coding sequence (CDS)

ATGGGTATTATGAACAGTTTTATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAAAAGCCGACCATAACCTCTCGGGAGATCCAAACGGCTGTGCGCCTTGTTCTTCCTGGTGAGTTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTTACTAGCTCTTAG

Protein sequence

MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Homology

[Close]

BLAST of MELO3C004868.1 vs. ExPASy Swiss-Prot
Match: Q9LQQ4 (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 126.7 bits (317), Expect = 9.6e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]

BLAST of MELO3C004868.1 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 85  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 144

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 145 TKFTSS 150

[Close]

BLAST of MELO3C004868.1 vs. ExPASy Swiss-Prot
Match: Q1S9I9 (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]

BLAST of MELO3C004868.1 vs. ExPASy Swiss-Prot
Match: Q9SI96 (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 86  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 145

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 146 TKFTSS 151

[Close]

BLAST of MELO3C004868.1 vs. ExPASy Swiss-Prot
Match: Q1SU99 (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 73  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 132

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 133 TKFTSS 138

[Close]

BLAST of MELO3C004868.1 vs. NCBI nr
Match: KAG6570722.1 (Histone H2B.6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 87  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 146

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 147 TKFTSS 152

[Close]

BLAST of MELO3C004868.1 vs. NCBI nr
Match: XP_023738036.1 (probable histone H2B.1 [Lactuca sativa] >PLY70518.1 hypothetical protein LSAT_1X64800 [Lactuca sativa])

HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]

BLAST of MELO3C004868.1 vs. NCBI nr
Match: CAA7036784.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 85  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 144

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 145 TKFTSS 150

[Close]

BLAST of MELO3C004868.1 vs. NCBI nr
Match: XP_022152883.1 (histone H2B.7 [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 77  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 136

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 137 TKFTSS 142

[Close]

BLAST of MELO3C004868.1 vs. NCBI nr
Match: XP_022937557.1 (histone H2B-like [Cucurbita moschata] >XP_022937558.1 histone H2B-like [Cucurbita moschata] >XP_022969534.1 histone H2B [Cucurbita maxima] >XP_023537508.1 histone H2B [Cucurbita pepo subsp. pepo] >XP_023537509.1 histone H2B [Cucurbita pepo subsp. pepo] >KAG6586018.1 hypothetical protein SDJN03_18751, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020794.1 hypothetical protein SDJN02_17482, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 76  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 135

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 136 TKFTSS 141

[Close]

BLAST of MELO3C004868.1 vs. ExPASy TrEMBL
Match: M5W0M7 (Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 76  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 135

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 136 TKFTSS 141

[Close]

BLAST of MELO3C004868.1 vs. ExPASy TrEMBL
Match: M5WDD7 (Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]

BLAST of MELO3C004868.1 vs. ExPASy TrEMBL
Match: A0A6J5XGW8 (Histone H2B OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS36013 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]

BLAST of MELO3C004868.1 vs. ExPASy TrEMBL
Match: A0A0A0LV55 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 77  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 136

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 137 TKFTSS 142

[Close]

BLAST of MELO3C004868.1 vs. ExPASy TrEMBL
Match: A0A178WBK5 (Histone H2B OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]

BLAST of MELO3C004868.1 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 6.8e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]

BLAST of MELO3C004868.1 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 74  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 133

Query: 61  TKFTS 66
           TKFTS
Sbjct: 134 TKFTS 138

[Close]

BLAST of MELO3C004868.1 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-29
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 86  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 145

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 146 TKFTSS 151

[Close]

BLAST of MELO3C004868.1 vs. TAIR 10
Match: AT5G02570.1 (Histone superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-29
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 67  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 126

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 127 TKFTSS 132

[Close]

BLAST of MELO3C004868.1 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-29
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 85  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 144

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 145 TKFTSS 150

The following BLAST results are available for this feature:

BLAST of MELO3C004868.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQQ4	9.6e-29	100.00	Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3	[more]
P40283	2.1e-28	98.48	Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5	[more]
Q1S9I9	2.1e-28	98.48	Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]
Q9SI96	2.1e-28	98.48	Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3	[more]
Q1SU99	2.1e-28	98.48	Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]

BLAST of MELO3C004868.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570722.1	7.3e-26	100.00	Histone H2B.6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023738036.1	7.3e-26	100.00	probable histone H2B.1 [Lactuca sativa] >PLY70518.1 hypothetical protein LSAT_1X...	[more]
CAA7036784.1	7.3e-26	100.00	unnamed protein product [Microthlaspi erraticum]	[more]
XP_022152883.1	7.3e-26	100.00	histone H2B.7 [Momordica charantia]	[more]
XP_022937557.1	7.3e-26	100.00	histone H2B-like [Cucurbita moschata] >XP_022937558.1 histone H2B-like [Cucurbit...	[more]

BLAST of MELO3C004868.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M5W0M7	3.6e-26	100.00	Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1	[more]
M5WDD7	3.6e-26	100.00	Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1	[more]
A0A6J5XGW8	3.6e-26	100.00	Histone H2B OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS36013 PE=3 SV=1	[more]
A0A0A0LV55	3.6e-26	100.00	Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1	[more]
A0A178WBK5	3.6e-26	100.00	Histone H2B OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=3 SV=1	[more]

BLAST of MELO3C004868.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07790.1	6.8e-30	100.00	Histone superfamily protein	[more]
AT2G37470.1	1.5e-29	100.00	Histone superfamily protein	[more]
AT2G28720.1	1.5e-29	98.48	Histone superfamily protein	[more]
AT5G02570.1	1.5e-29	98.48	Histone superfamily protein	[more]
AT5G59910.1	1.5e-29	98.48	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 37..50 score: 92.45 coord: 20..37 score: 76.51 coord: 50..63 score: 92.65
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 1..65 e-value: 5.1E-35 score: 132.3
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 1..66
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 34..56
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..66 e-value: 1.1E-37 score: 130.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 1..66
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 1..42 e-value: 6.8E-10 score: 39.4
None	No IPR available	PANTHER	PTHR23428:SF262	HISTONE H2B.11	coord: 1..66

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C004868	MELO3C004868	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004868.1:exon:347886	MELO3C004868.1:exon:347886	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004868.1:three_prime_utr	MELO3C004868.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004868.1:cds	MELO3C004868.1:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004868.1:five_prime_utr	MELO3C004868.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C004868.1	MELO3C004868.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity