MELO3C003817.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C003817.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Locationchr04: 4815886 .. 4817054 (-)
Sequence length868
RNA-Seq ExpressionMELO3C003817.1
SyntenyMELO3C003817.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGCAATCAAATAAAGTTTAATATTGTAAAGTTTTAGATAAGATCGGAGCCAAAAGAGATAAAGACACACTGCTCGCCAGACGCCAACTTTGTAATTCATCATATATATATATATATATTGCTGCTTCTTCTCACTAACAAACCATATTTATCTGACTTTCGAATTAAGAAAAAAAAAAGTTTGGTTTTTGAGTGATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACCGATCCCCAAGAAGGTAACTGAATTCTCTTTCCATTTCAATTTTAAATTGAATAATTCTCTGAGGGGGTTTTTTATTTTTTATTTTCTTTTTCCTAAAATTGATTTTTGGAATGGTTATCAGTGAGTCATCGGAGGAATAAGTCATTGACGAAAGAGGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGTATATATAAAGATTATTGGGAGTTCTTCTTCATCTTCAATTCTTTTTTGGATTTTAATTATAAGTTAATTAATTATGGAGTTATATGTGTATATGGCAGGAAAAAGAAAAGGAAAATGTTGGAAATAATCTACAGAGATCAGCCTCTATGCCTCCATTCAATACAAGGAAGGGTTTACTGGAGAATGTGAAATCTGAAACCAACTTAGAAAAGCCCGAGAAAAATCCCTGGTAATTCTATGTGTGTATATATATATATATATAGTAAAATGAATGAAAATATGTGAACAAAATTTGACATTATTGAAACTTGAAATTTGACAGGTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGGTCGGGTAACAGCTACGTGTCGCAGTTCCACGTTGCAAACATGGCGGCTTCCAGACTTGGCCGTGGTGGCGTCAGTGCTTAAGCAGCAATGTTAATTTCGTTCTTTTTTTAATCTTTTGTTGCGTTGGTGACGGAGTCGGAGTGGGTGTGGATGTGATCGGAAAGAAAAAACAAAATTAAAAGATTATGTTGTAAATTAATTGGATTTGAAGGGTGTGTGTATGAGTGTTTGATATATATATGTATATATGATGTAAAATTATTGTTGTTTCTCTTTTTTTTTTTTTGTTTGTTTAAGTATTGTAATTTAGATTTTGCTA

mRNA sequence

AGGCAATCAAATAAAGTTTAATATTGTAAAGTTTTAGATAAGATCGGAGCCAAAAGAGATAAAGACACACTGCTCGCCAGACGCCAACTTTGTAATTCATCATATATATATATATATATTGCTGCTTCTTCTCACTAACAAACCATATTTATCTGACTTTCGAATTAAGAAAAAAAAAAGTTTGGTTTTTGAGTGATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACCGATCCCCAAGAAGTGAGTCATCGGAGGAATAAGTCATTGACGAAAGAGGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGAAAATGTTGGAAATAATCTACAGAGATCAGCCTCTATGCCTCCATTCAATACAAGGAAGGGTTTACTGGAGAATGTGAAATCTGAAACCAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGGTCGGGTAACAGCTACGTGTCGCAGTTCCACGTTGCAAACATGGCGGCTTCCAGACTTGGCCGTGGTGGCGTCAGTGCTTAAGCAGCAATGTTAATTTCGTTCTTTTTTTAATCTTTTGTTGCGTTGGTGACGGAGTCGGAGTGGGTGTGGATGTGATCGGAAAGAAAAAACAAAATTAAAAGATTATGTTGTAAATTAATTGGATTTGAAGGGTGTGTGTATGAGTGTTTGATATATATATGTATATATGATGTAAAATTATTGTTGTTTCTCTTTTTTTTTTTTTGTTTGTTTAAGTATTGTAATTTAGATTTTGCTA

Coding sequence (CDS)

ATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACCGATCCCCAAGAAGTGAGTCATCGGAGGAATAAGTCATTGACGAAAGAGGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGAAAATGTTGGAAATAATCTACAGAGATCAGCCTCTATGCCTCCATTCAATACAAGGAAGGGTTTACTGGAGAATGTGAAATCTGAAACCAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGGTCGGGTAACAGCTACGTGTCGCAGTTCCACGTTGCAAACATGGCGGCTTCCAGACTTGGCCGTGGTGGCGTCAGTGCTTAA

Protein sequence

MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Homology
[Close]
BLAST of MELO3C003817.1 vs. NCBI nr
Match: XP_008466545.1 (PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo] >KAA0041574.1 putative DNA polymerase epsilon catalytic subunit A [Cucumis melo var. makuwa] >TYK19682.1 putative DNA polymerase epsilon catalytic subunit A [Cucumis melo var. makuwa])

HSP 1 Score: 293.5 bits (750), Expect = 9.9e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE
Sbjct: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60

Query: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
           KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG
Sbjct: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLGRGGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGRGGVSA 144

[Close]
BLAST of MELO3C003817.1 vs. NCBI nr
Match: XP_004147861.1 (uncharacterized protein LOC101222738 [Cucumis sativus] >KGN59980.1 hypothetical protein Csa_001013 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 9.3e-74
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE
Sbjct: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60

Query: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
           K N+GNNLQRSASMPPFNTRKGL EN+KSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG
Sbjct: 61  KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLGRGGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGRGGVSA 144

[Close]
BLAST of MELO3C003817.1 vs. NCBI nr
Match: XP_038898962.1 (uncharacterized protein LOC120086405 [Benincasa hispida])

HSP 1 Score: 251.9 bits (642), Expect = 3.3e-63
Identity = 128/144 (88.89%), Postives = 133/144 (92.36%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFET EEK+
Sbjct: 1   MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETSEEKK 60

Query: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
            EN G NLQRSAS+PPF T KGLLE ++SE NLEKP+KN WWRRSNWAFLNEPPETEGSG
Sbjct: 61  MEN-GGNLQRSASLPPFKTGKGLLE-MESEKNLEKPKKNAWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLG GGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGPGGVSA 142

[Close]
BLAST of MELO3C003817.1 vs. NCBI nr
Match: XP_022982140.1 (uncharacterized protein LOC111481065 [Cucurbita maxima])

HSP 1 Score: 232.3 bits (591), Expect = 2.7e-57
Identity = 118/146 (80.82%), Postives = 133/146 (91.10%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-K 60
           MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K
Sbjct: 1   MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFQSCEEIK 60

Query: 61  EKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEKNPWWRRSNWAFLNEPPETEG 120
           + E  GNNLQRS+S+PPFNTRKGLL+ ++SE +L+ KP+KN WWRRSNWAFLNEPP  EG
Sbjct: 61  KVEFGGNNLQRSSSVPPFNTRKGLLD-MESEASLDNKPKKNGWWRRSNWAFLNEPPVIEG 120

Query: 121 SGNSYVSQFHVANMAASRLGRGGVSA 145
           SGNSYVSQFHVAN+AASRLGRGGV A
Sbjct: 121 SGNSYVSQFHVANVAASRLGRGGVGA 145

[Close]
BLAST of MELO3C003817.1 vs. NCBI nr
Match: XP_022940046.1 (uncharacterized protein LOC111445795 [Cucurbita moschata] >KAG6608544.1 hypothetical protein SDJN03_01886, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037867.1 hypothetical protein SDJN02_01498 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230.7 bits (587), Expect = 7.9e-57
Identity = 117/146 (80.14%), Postives = 132/146 (90.41%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-K 60
           MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K
Sbjct: 1   MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFQSCEEIK 60

Query: 61  EKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEKNPWWRRSNWAFLNEPPETEG 120
           + E  GNNLQRS+S+PPFNTRKG L+ ++SE +L+ KP+KN WWRRSNWAFLNEPP  EG
Sbjct: 61  KVEFGGNNLQRSSSVPPFNTRKGFLD-MESEASLDNKPKKNGWWRRSNWAFLNEPPVIEG 120

Query: 121 SGNSYVSQFHVANMAASRLGRGGVSA 145
           SGNSYVSQFHVAN+AASRLGRGGV A
Sbjct: 121 SGNSYVSQFHVANVAASRLGRGGVGA 145

[Close]
BLAST of MELO3C003817.1 vs. ExPASy TrEMBL
Match: A0A5D3D820 (Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00760 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.8e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE
Sbjct: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60

Query: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
           KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG
Sbjct: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLGRGGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGRGGVSA 144

[Close]
BLAST of MELO3C003817.1 vs. ExPASy TrEMBL
Match: A0A1S3CST6 (uncharacterized protein LOC103503930 OS=Cucumis melo OX=3656 GN=LOC103503930 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.8e-76
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE
Sbjct: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60

Query: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
           KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG
Sbjct: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLGRGGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGRGGVSA 144

[Close]
BLAST of MELO3C003817.1 vs. ExPASy TrEMBL
Match: A0A0A0LDC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G859670 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.5e-74
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60
           MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE
Sbjct: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKE 60

Query: 61  KENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120
           K N+GNNLQRSASMPPFNTRKGL EN+KSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG
Sbjct: 61  KGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFLNEPPETEGSG 120

Query: 121 NSYVSQFHVANMAASRLGRGGVSA 145
           NSYVSQFHVANMAASRLGRGGVSA
Sbjct: 121 NSYVSQFHVANMAASRLGRGGVSA 144

[Close]
BLAST of MELO3C003817.1 vs. ExPASy TrEMBL
Match: A0A6J1J1T2 (uncharacterized protein LOC111481065 OS=Cucurbita maxima OX=3661 GN=LOC111481065 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 118/146 (80.82%), Postives = 133/146 (91.10%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-K 60
           MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K
Sbjct: 1   MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFQSCEEIK 60

Query: 61  EKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEKNPWWRRSNWAFLNEPPETEG 120
           + E  GNNLQRS+S+PPFNTRKGLL+ ++SE +L+ KP+KN WWRRSNWAFLNEPP  EG
Sbjct: 61  KVEFGGNNLQRSSSVPPFNTRKGLLD-MESEASLDNKPKKNGWWRRSNWAFLNEPPVIEG 120

Query: 121 SGNSYVSQFHVANMAASRLGRGGVSA 145
           SGNSYVSQFHVAN+AASRLGRGGV A
Sbjct: 121 SGNSYVSQFHVANVAASRLGRGGVGA 145

[Close]
BLAST of MELO3C003817.1 vs. ExPASy TrEMBL
Match: A0A6J1FHE8 (uncharacterized protein LOC111445795 OS=Cucurbita moschata OX=3662 GN=LOC111445795 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.8e-57
Identity = 117/146 (80.14%), Postives = 132/146 (90.41%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-K 60
           MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K
Sbjct: 1   MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFQSCEEIK 60

Query: 61  EKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEKNPWWRRSNWAFLNEPPETEG 120
           + E  GNNLQRS+S+PPFNTRKG L+ ++SE +L+ KP+KN WWRRSNWAFLNEPP  EG
Sbjct: 61  KVEFGGNNLQRSSSVPPFNTRKGFLD-MESEASLDNKPKKNGWWRRSNWAFLNEPPVIEG 120

Query: 121 SGNSYVSQFHVANMAASRLGRGGVSA 145
           SGNSYVSQFHVAN+AASRLGRGGV A
Sbjct: 121 SGNSYVSQFHVANVAASRLGRGGVGA 145

[Close]
BLAST of MELO3C003817.1 vs. TAIR 10
Match: AT1G19530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19
Identity = 61/138 (44.20%), Postives = 77/138 (55.80%), Query Frame = 0 

Query: 1   MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLE--- 60
           MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK+  EE      S   T E   
Sbjct: 1   MGSLMSGWDSRVRDPKSV--RRCKSLTREEIDTFWKTKKKNEEEEHVQAFSKLVTQEGAQ 60

Query: 61  --EKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFLNEPPE 120
              KEK++V +                L EN        + + + WWR++ WAFLNEP E
Sbjct: 61  SQAKEKKSVDD----------------LFEN--------QSKSSGWWRKTYWAFLNEPRE 112

Query: 121 TEGSGNSYVSQFHVANMA 134
            EG  N+YVSQF VA++A
Sbjct: 121 EEGRPNNYVSQFKVAHIA 112

The following BLAST results are available for this feature:
BLAST of MELO3C003817.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466545.19.9e-76100.00PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo] >KAA0041574.1 put... [more]
XP_004147861.19.3e-7497.22uncharacterized protein LOC101222738 [Cucumis sativus] >KGN59980.1 hypothetical ... [more]
XP_038898962.13.3e-6388.89uncharacterized protein LOC120086405 [Benincasa hispida][more]
XP_022982140.12.7e-5780.82uncharacterized protein LOC111481065 [Cucurbita maxima][more]
XP_022940046.17.9e-5780.14uncharacterized protein LOC111445795 [Cucurbita moschata] >KAG6608544.1 hypothet... [more]
BLAST of MELO3C003817.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C003817.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D8204.8e-76100.00Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa ... [more]
A0A1S3CST64.8e-76100.00uncharacterized protein LOC103503930 OS=Cucumis melo OX=3656 GN=LOC103503930 PE=... [more]
A0A0A0LDC24.5e-7497.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G859670 PE=4 SV=1[more]
A0A6J1J1T21.3e-5780.82uncharacterized protein LOC111481065 OS=Cucurbita maxima OX=3661 GN=LOC111481065... [more]
A0A6J1FHE83.8e-5780.14uncharacterized protein LOC111445795 OS=Cucurbita moschata OX=3662 GN=LOC1114457... [more]
BLAST of MELO3C003817.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G19530.11.4e-1944.20unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR33872:SF2DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..135
NoneNo IPR availablePANTHERPTHR33872DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..135

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C003817MELO3C003817gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003817.1:exon:98474MELO3C003817.1:exon:98474exon
MELO3C003817.1:exon:98473MELO3C003817.1:exon:98473exon
MELO3C003817.1:exon:98472MELO3C003817.1:exon:98472exon
MELO3C003817.1:exon:98471MELO3C003817.1:exon:98471exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003817.1:three_prime_utrMELO3C003817.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003817.1:cdsMELO3C003817.1:cdsCDS
MELO3C003817.1:cdsMELO3C003817.1:cds_2CDS
MELO3C003817.1:cdsMELO3C003817.1:cds_3CDS
MELO3C003817.1:cdsMELO3C003817.1:cds_4CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C003817.1:five_prime_utrMELO3C003817.1:five_prime_utrfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C003817.1MELO3C003817.1-proteinpolypeptide