MELO.jh034689.1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAAGAATTATATATATATATATCCAATATATCATCAAATTAGCTTATAATTTGAAAGATGACTCTTGGAATCAATATTTCTGGTGGCCTTCAAATTGTGAATCCATTGGACAGTTTGCTTCTTGAGGTATGTGTTCCACTTGTGCTTAATCATTGTCGTGCTATACTTGGAATTGACGCCCAGTTTGAAGGTATTATAGATGGTCACTATGAGGTTGGACCAAATGGCAAAACATATACCCTTAAGTTGAAACTAAAGGTCAGGATTGGTGATGCTTATGTTATTAAGATCGTTGTGGTTAAATTCTTTTGGCCATTCATTGGCATTCCAACAAACCTTTTGTCTTTCGAGTATGTTGAAGAAATCAACATCTAAAAGCCATGAAATCACATGCTATCTATAATGAAAATGTTGCTTTCATATGCATCATTTTCATCTCTTATATATGTATCAATAAATATGTAAAACTGGCTTTCTCCTTAAGAATGCAATAAGGGATATTTCAATTTACATTATATTTGCTTTCTTAATGTCTTCTTCTTCTTTTTTAATCGTTCTTCTATTTCTAAAATCTTTGATTGTGAGTTTGAAATATTATCACTCGACACTTTTTATCTTTCTTCTACTTCTTGAATCTCTGACTGTAAAGCACATAAAGTTTGTTAAAAGTTAGAGTAAGTAAATGAGCTTAGGAGAGCAATCATGGTGGGGTGGCCAACAATCTGTGTATTTCATCATTCTATTTAAACAAACCTTCTCTTTACATTTTACAGAGTGTGTGAGCAAGGAACATTGAGTGTGTAGTTGTCTTTTCCTTCTTCATTGTTCTCTGTATTCTTGTGAAAATAAGTGAAGAGTTTTGTGAGGCTTTCTACTATAGGCTTTCTACTATAACTCTTTAGTGTTCTTCTCCTTCTTCTATCTTTTATTTACGTTTGCATTCTTTGGCTATTGGTACTGTTTTCGATTGAGAAAAATCCAGCAACAGTCTACAATTTTTGCCCTAGCTTTTAATTATAACTTGATTAATTCGATCTCAAAGTTCTATATCTAATTGTATATGGCCACTAGTTTGTAATTCTTTTTAATTCTCCTAGCTTTAAATTTTGTCACTTCATACATCTAATTCTTGACGACATGATAAGGGTTCAGACGTTCCATCTAGAAAAAGATTGTATATCAATTCTTATCGAGCTAAATTCGTTTTGAACTTTTTTTTTCTAAATAAAGATATATAATCTAAAAATATATTTTCTTGTCAAAAAAATAATCTAAAAAAATATTTTGACTTCAATAAAAGTTTGCTCGATTCAAGTATTCTATTTTTTTTAATTTTTCGTTCTTGTATAATGTGAAAATATATGTATATAAAAAAAATACGTAAAAAAGTAAAAAGACATTTTCGATCAAGCAACTCAATCTTAAATAAAATATTATATATATGGGTTTTGGCCAAAAGGTGAGTGTACTCTAACTCACATAATGTACATACAAACTGTTACTTATAAGACAATCAGATTCAAATTTATCGATTAATTAGAAACAAAAGAAAAACCAAAACCAGTGTTCAGTCCAATGGTTCCATTTTCTTTTATTTAATTAATTATTTAATGGATCTAGTTCTCTTGTGCTCCAACTATTGAATATCTTATTTTTTATGAATTGTTTGGATTTAGCATTGGCCTTTTGGTTTTTGCTTTTGGGTCCGTGTCCAGAGTCTGCGTTTGGTGAGTTCACCTCACATAAAACATATCCTTTGCAACTATGAAGGAAAATAGAATTGTTCGAGAAGATCATAGTGGGTGCTTGATAGTATCTTTGTCCCGTGACGTTGGATTCAGGGGAGCAACTTCTGGTGTACATGTGGCTATCTTGTTAGTTGAATAGCTATATTTACAGCATGATAGAGTATTTTGTGCAATCTTAGTAGAGTAGGCCTAATCATGTTCTTATATATCATTTTACGTGGAAATATATGATCTCGTTTTATGGGTCTAATTAAGATCTTCAAGATGCAGATGTTATGTGATCGAACTGGATTACCAACTCTCGTTGTTCTGATTATTGTTTTTAGTATCTGTTACTTATTATCTTGAGTGCTAACTTATGTTGTCAGTTAGTTAATCGTGACTTCTTTTTTTAAGGAGGTTAATTAGTAATAGTATATATAAAGGTGGATAAGTAGTAGAAACTAGATGAGTGAAGAAATTAAAGAAGCATAGAGAGATCAATAATTATTACTAAAAAGATTGTAATGGTTCTAATATCATTAAACACAATGACTCAGTTCGATTGCATGTGAA AGAGAAGAATTATATATATATATATCCAATATATCATCAAATTAGCTTATAATTTGAAAGATGACTCTTGGAATCAATATTTCTGGTGGCCTTCAAATTGTGAATCCATTGGACAGTTTGCTTCTTGAGGTATGTGTTCCACTTGTGCTTAATCATTGTCGTGCTATACTTGGAATTGACGCCCAGTTTGAAGGTATTATAGATGGTCACTATGAGGTTGGACCAAATGGCAAAACATATACCCTTAAGTTGAAACTAAAGGTCAGGATTGGTGATGCTTATGTTATTAAGATCGTTGTGGTTAAATTCTTTTGGCCATTCATTGGCATTCCAACAAACCTTTTGTCTTTCGAGTATGTTGAAGAAATCAACATCTAAAAGCCATGAAATCACATGCTATCTATAATGAAAATGTTGCTTTCATATGCATCATTTTCATCTCTTATATATGTATCAATAAATATGTAAAACTGGCTTTCTCCTTAAGAATGCAATAAGGGATATTTCAATTTACATTATATTTGCTTTCTTAATGTCTTCTTCTTCTTTTTTAATCGTTCTTCTATTTCTAAAATCTTTGATTGTGAGTTTGAAATATTATCACTCGACACTTTTTATCTTTCTTCTACTTCTTGAATCTCTGACTGTAAAGCACATAAAGTTTGTTAAAAGTTAGAGTAAGTAAATGAGCTTAGGAGAGCAATCATGGTGGGGTGGCCAACAATCTGTGTATTTCATCATTCTATTTAAACAAACCTTCTCTTTACATTTTACAGAGTGTGTGAGCAAGGAACATTGAGTGTGTAGTTGTCTTTTCCTTCTTCATTGTTCTCTGTATTCTTGTGAAAATAAGTGAAGAGTTTTGTGAGGCTTTCTACTATAGGCTTTCTACTATAACTCTTTAGTGTTCTTCTCCTTCTTCTATCTTTTATTTACGTTTGCATTCTTTGGCTATTGGTACTGTTTTCGATTGAGAAAAATCCAGCAACAGTCTACAATTTTTGCCCTAGCTTTTAATTATAACTTGATTAATTCGATCTCAAAGTTCTATATCTAATTGTATATGGCCACTAGTTTGTAATTCTTTTTAATTCTCCTAGCTTTAAATTTTGTCACTTCATACATCTAATTCTTGACGACATGATAAGGGTTCAGACGTTCCATCTAGAAAAAGATTGTATATCAATTCTTATCGAGCTAAATTCGTTTTGAACTTTTTTTTTCTAAATAAAGATATATAATCTAAAAATATATTTTCTTGTCAAAAAAATAATCTAAAAAAATATTTTGACTTCAATAAAAGTTTGCTCGATTCAAGTATTCTATTTTTTTTAATTTTTCGTTCTTGTATAATGTGAAAATATATGTATATAAAAAAAATACGTAAAAAAGTAAAAAGACATTTTCGATCAAGCAACTCAATCTTAAATAAAATATTATATATATGGGTTTTGGCCAAAAGGTGAGTGTACTCTAACTCACATAATGTACATACAAACTGTTACTTATAAGACAATCAGATTCAAATTTATCGATTAATTAGAAACAAAAGAAAAACCAAAACCAGTGTTCAGTCCAATGGTTCCATTTTCTTTTATTTAATTAATTATTTAATGGATCTAGTTCTCTTGTGCTCCAACTATTGAATATCTTATTTTTTATGAATTGTTTGGATTTAGCATTGGCCTTTTGGTTTTTGCTTTTGGGTCCGTGTCCAGAGTCTGCGTTTGGTGAGTTCACCTCACATAAAACATATCCTTTGCAACTATGAAGGAAAATAGAATTGTTCGAGAAGATCATAGTGGGTGCTTGATAGTATCTTTGTCCCGTGACGTTGGATTCAGGGGAGCAACTTCTGGTGTACATGTGGCTATCTTGTTAGTTGAATAGCTATATTTACAGCATGATAGAGTATTTTGTGCAATCTTAGTAGAGTAGGCCTAATCATGTTCTTATATATCATTTTACGTGGAAATATATGATCTCGTTTTATGGGTCTAATTAAGATCTTCAAGATGCAGATGTTATGTGATCGAACTGGATTACCAACTCTCGTTGTTCTGATTATTGTTTTTAGTATCTGTTACTTATTATCTTGAGTGCTAACTTATGTTGTCAGTTAGTTAATCGTGACTTCTTTTTTTAAGGAGGTTAATTAGTAATAGTATATATAAAGGTGGATAAGTAGTAGAAACTAGATGAGTGAAGAAATTAAAGAAGCATAGAGAGATCAATAATTATTACTAAAAAGATTGTAATGGTTCTAATATCATTAAACACAATGACTCAGTTCGATTGCATGTGAA ATGACTCTTGGAATCAATATTTCTGGTGGCCTTCAAATTGTGAATCCATTGGACAGTTTGCTTCTTGAGGTATGTGTTCCACTTGTGCTTAATCATTGTCGTGCTATACTTGGAATTGACGCCCAGTTTGAAGGTATTATAGATGGTCACTATGAGGTTGGACCAAATGGCAAAACATATACCCTTAAGTTGAAACTAAAGGTCAGGATTGGTGATGCTTATGTTATTAAGATCGTTGTGGTTAAATTCTTTTGGCCATTCATTGGCATTCCAACAAACCTTTTGTCTTTCGAGTATGTTGAAGAAATCAACATCTAA MTLGINISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHYEVGPNGKTYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGIPTNLLSFEYVEEINI Homology
BLAST of MELO.jh034689.1.t1 vs. NCBI nr
Match: KAA0040704.1 (hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa] >TYK00712.1 hypothetical protein E5676_scaffold75352G00010 [Cucumis melo var. makuwa] >TYK14273.1 hypothetical protein E5676_scaffold4170G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 210 bits (535), Expect = 1.57e-68 Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of MELO.jh034689.1.t1 vs. NCBI nr
Match: KAE8647454.1 (hypothetical protein Csa_003781 [Cucumis sativus]) HSP 1 Score: 134 bits (337), Expect = 2.51e-38 Identity = 70/108 (64.81%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of MELO.jh034689.1.t1 vs. NCBI nr
Match: KGN48337.1 (hypothetical protein Csa_004454 [Cucumis sativus]) HSP 1 Score: 117 bits (293), Expect = 1.18e-31 Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of MELO.jh034689.1.t1 vs. NCBI nr
Match: XP_031744690.1 (actin-related protein 2-like [Cucumis sativus]) HSP 1 Score: 68.2 bits (165), Expect = 5.63e-12 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of MELO.jh034689.1.t1 vs. ExPASy TrEMBL
Match: A0A5D3BPM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4170G00020 PE=4 SV=1) HSP 1 Score: 210 bits (535), Expect = 7.62e-69 Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of MELO.jh034689.1.t1 vs. ExPASy TrEMBL
Match: A0A0A0KFK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483240 PE=4 SV=1) HSP 1 Score: 135 bits (341), Expect = 2.99e-39 Identity = 71/108 (65.74%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of MELO.jh034689.1.t1 vs. ExPASy TrEMBL
Match: A0A0A0KKQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483230 PE=4 SV=1) HSP 1 Score: 130 bits (326), Expect = 5.76e-37 Identity = 69/108 (63.89%), Postives = 86/108 (79.63%), Query Frame = 0
BLAST of MELO.jh034689.1.t1 vs. ExPASy TrEMBL
Match: A0A0A0KIX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483235 PE=4 SV=1) HSP 1 Score: 117 bits (293), Expect = 5.72e-32 Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of MELO.jh034689.1.t1 vs. ExPASy TrEMBL
Match: A0A0A0KFL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483250 PE=4 SV=1) HSP 1 Score: 113 bits (282), Expect = 2.55e-30 Identity = 57/104 (54.81%), Postives = 80/104 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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