MELO.jh003796.1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TAAGCCATCAAGCATTCACAAGTTCCACATATTTCTCCTTCAAATAATCTTCTAAAAGTACTTTCAAAAAGTAATAATAATAATAATAATAATTTTGAAAATCCCTTATTTATATCTTCTATTTCTGACCACCTTAAGGATTCCAAAAACTGTCTTACTTTTTGGTATCCTTAGTTTTTCTTTCTATACTCTTTCATCTCCTGATCTTATAACCAAAATAACATAATTATAAAGTCCTTTTATCCAAAAATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCTTCTTCTTCTTATCTAATCAAGCTCAAGGTATGCAAAACTCTCTGCCCTTTCTGTTAGATGGGTTTTGTTTATTTTGCTTTTGAATTTTCATTATGCGTTATTAATGACTTAAATTGATTCTGAGTTGGTTTTTCTATATTATGAAAGGTATTCGCTTGGGAAATGGAATCATGATCAAGCTTGTTGGGCAACCAGCAAAAACCCTAGTGAGTTTTCTTCGATCTTTTTATTATATGTTTGGAATATCTCATTTGATAATATGTTTAGATTTCGTTTTTTATTTTTCAGATTTTAATTTGGATGAACTTTTCTAATAGTTAAGAAGAAATCTATGAATATAACGAATATTTTATAAGCTTAATTTTTTTAGAAGAATTAAGTGTTTATAACTCAACATTTTGGGTGGTTTTTTTAAATATATTTATTTGTTTATGTGGTCAAAATCTGTAATATTGATATGGCTGCTACATTGATATTGCAGGAAGAAGAAGTAGTAGAAGGTTTTAGGAAAACTACTATTTGTGAAAATGGGCATTGTAATTCAGGTATGCTATCTAGTGAAATAGTGCAATTTAAATCTTCATTCATGACCTTTTTTTTTTCTTTTCAAAAAGTCAACTTATAAATTATAATATCTACATTTTTTTTTTATGTTTTTATACTTAAAACCAAAATTGGGCTTAAAAGGTGAGAAATATATATCAAACAGAGTTATGATTTTTTAAAAAATTGATGCATTAAATTGTGCCCCAAAAATGTTGGTAAAACATCATTAAAAAAGCAACCCAAATGGGACATACTATTTCATAATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGATAGATAGATAGATATATCCATATATATCAGAAGTGGGTTTGACATTATTTGATATTTATGATATTGCAGGAAACAATAGAAAACTTATGACTGTGACTACACCACCAATACCATCATCTCCAACTCCTTCTACAAGGGTTAGTCATCCATTACTTCAATCTTATTTTTTTTAAAAAACATTGATGAATCATTTACTAAAACTATTGCTTTTTAACAATTTTAAAAGTTATTCTTACTTGTATTTTGTCACTATTTCATCATCCTTCCCACCTAAACATTTGAATAATGCATAGCTGAATGGTTTATTGTGTTCTTGATCATACAGAATAATGAAGAAGAAAATTACAAAAAGGGGAACCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATGATTTGGAGAATTCAGAGGCAGTTTCTAAAAACCTTGAGGCAGCCCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAAACTAATCCCAAAATAAATAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAACAACAACCAAACAATAAAGTTTATATTTCAAAAAAAAAAAATCTATATATTCAACAAAAGACGTAGAAAAAAAAAAAGATATATAATTTGGGATATAAAAGACAGCCTTACACAAATGCTGCAGGTTTTTTAGGGTTTAGCTTAGGGAAACTGTCCTCTTGTACAAAGCATTATTATTAAAATGCTATGTTATTATTATAATAATAATAATAATTATTATTATTA TAAGCCATCAAGCATTCACAAGTTCCACATATTTCTCCTTCAAATAATCTTCTAAAAGTACTTTCAAAAAGTAATAATAATAATAATAATAATTTTGAAAATCCCTTATTTATATCTTCTATTTCTGACCACCTTAAGGATTCCAAAAACTGTCTTACTTTTTGGTATCCTTAGTTTTTCTTTCTATACTCTTTCATCTCCTGATCTTATAACCAAAATAACATAATTATAAAGTCCTTTTATCCAAAAATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCTTCTTCTTCTTATCTAATCAAGCTCAAGGTATTCGCTTGGGAAATGGAATCATGATCAAGCTTGTTGGGCAACCAGCAAAAACCCTAGAAGAAGAAGTAGTAGAAGGTTTTAGGAAAACTACTATTTGTGAAAATGGGCATTGTAATTCAGGAAACAATAGAAAACTTATGACTGTGACTACACCACCAATACCATCATCTCCAACTCCTTCTACAAGGAATAATGAAGAAGAAAATTACAAAAAGGGGAACCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATGATTTGGAGAATTCAGAGGCAGTTTCTAAAAACCTTGAGGCAGCCCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAAACTAATCCCAAAATAAATAAAAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAACAACAACCAAACAATAAAGTTTATATTTCAAAAAAAAAAAATCTATATATTCAACAAAAGACGTAGAAAAAAAAAAAGATATATAATTTGGGATATAAAAGACAGCCTTACACAAATGCTGCAGGTTTTTTAGGGTTTAGCTTAGGGAAACTGTCCTCTTGTACAAAGCATTATTATTAAAATGCTATGTTATTATTATAATAATAATAATAATTATTATTATTA ATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCTTCTTCTTCTTATCTAATCAAGCTCAAGGTATTCGCTTGGGAAATGGAATCATGATCAAGCTTGTTGGGCAACCAGCAAAAACCCTAGAAGAAGAAGTAGTAGAAGGTTTTAGGAAAACTACTATTTGTGAAAATGGGCATTGTAATTCAGGAAACAATAGAAAACTTATGACTGTGACTACACCACCAATACCATCATCTCCAACTCCTTCTACAAGGAATAATGAAGAAGAAAATTACAAAAAGGGGAACCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATGATTTGGAGAATTCAGAGGCAGTTTCTAAAAACCTTGAGGCAGCCCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAA MSSNNYALPSLLLLLLFFFLSNQAQGIRLGNGIMIKLVGQPAKTLEEEVVEGFRKTTICENGHCNSGNNRKLMTVTTPPIPSSPTPSTRNNEEENYKKGNPKSSNKEESSSVKKKDDLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN Homology
BLAST of MELO.jh003796.1.t1 vs. NCBI nr
Match: KAA0050046.1 (uncharacterized protein E6C27_scaffold675G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 289 bits (740), Expect = 3.02e-98 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. NCBI nr
Match: XP_004146738.1 (uncharacterized protein LOC101204556 [Cucumis sativus] >KGN65206.1 hypothetical protein Csa_019538 [Cucumis sativus]) HSP 1 Score: 241 bits (614), Expect = 4.86e-79 Identity = 138/156 (88.46%), Postives = 144/156 (92.31%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. NCBI nr
Match: XP_038876887.1 (uncharacterized protein LOC120069249 [Benincasa hispida]) HSP 1 Score: 199 bits (507), Expect = 1.03e-62 Identity = 118/159 (74.21%), Postives = 131/159 (82.39%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. NCBI nr
Match: XP_022135362.1 (uncharacterized protein LOC111007333 [Momordica charantia]) HSP 1 Score: 146 bits (369), Expect = 9.32e-42 Identity = 99/151 (65.56%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. NCBI nr
Match: XP_022135297.1 (uncharacterized protein LOC111007293 [Momordica charantia]) HSP 1 Score: 130 bits (328), Expect = 4.68e-35 Identity = 89/144 (61.81%), Postives = 104/144 (72.22%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. ExPASy TrEMBL
Match: A0A5A7U792 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00250 PE=4 SV=1) HSP 1 Score: 289 bits (740), Expect = 1.46e-98 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. ExPASy TrEMBL
Match: A0A0A0LYZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264570 PE=4 SV=1) HSP 1 Score: 241 bits (614), Expect = 2.36e-79 Identity = 138/156 (88.46%), Postives = 144/156 (92.31%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. ExPASy TrEMBL
Match: A0A6J1C2H1 (uncharacterized protein LOC111007333 OS=Momordica charantia OX=3673 GN=LOC111007333 PE=4 SV=1) HSP 1 Score: 146 bits (369), Expect = 4.51e-42 Identity = 99/151 (65.56%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. ExPASy TrEMBL
Match: A0A6J1C2B2 (uncharacterized protein LOC111007293 OS=Momordica charantia OX=3673 GN=LOC111007293 PE=4 SV=1) HSP 1 Score: 130 bits (328), Expect = 2.27e-35 Identity = 89/144 (61.81%), Postives = 104/144 (72.22%), Query Frame = 0
BLAST of MELO.jh003796.1.t1 vs. ExPASy TrEMBL
Match: A0A6J1E3V7 (uncharacterized protein LOC111025844 OS=Momordica charantia OX=3673 GN=LOC111025844 PE=4 SV=1) HSP 1 Score: 129 bits (323), Expect = 4.21e-35 Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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