MC11g_new0493.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0493.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 19250825 .. 19253386 (+)
Sequence length	543
RNA-Seq Expression	MC11g_new0493.1
Synteny	MC11g_new0493.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCGGAGGAAGAAGAAGAAGGGCTCAATCGCAACAGTTTGTGCATCCCTTCTTGCGGGCATTTCAGTCAGCAAAAACCCTTCGCTGTTTTTGGAGTCTCTGAAGAGGAAAGAGAGAGAGAGAGAGTTAGAGAGAGAAACAGAGGGCGGGAAAGTTGGAGAAGAAGAGTGGGTTTTGCGGGTGTTGGAGATGGCGCTGTGGGGATGATGAAAATGGTGAGAGAGAAAGAGGGTAAGGGTTTTTTGAAATTGCGGCCATGTGAGAAACACAGGGTTTTTGCTCTCTTCTCGTAAGCATAAATTTCTGAATTCATTTTGATTTGTATCTTTCAAATAATCCCTTGCTTTATGGCTACATTACCCTAAAAAAAATGGGGTTATCTTCAATGAAAAATTGCCGGTGGCAAAATCTAAAATGAGGTTGCAATTTGTCTTGTTATTCATTTCATTCTCAACCTCTATTGTTTACTCGATTTTTGAGCTAAAATGATAACTTACTCTACCTTTTCTCTTTTTTTTTGGACTTAATTAGACAAGTTTTACGTTAATTGTCACGTCATTTTAAGATTCTGCCACGTCAATTTTTTGTTAAAAATATTCATTGATGTTTCTCAAAGGTATTCTTGAAACGTTTTTTGGAAGATCGTGCTCGTACGGTTCAAAGAAGGGTATGATCAACCTTTCCCTAACCATAGTCGTGACAACCCACGAATAAACTCAAACCTTTCGACCTACAATGCGATGACCTGATCCAAAAACTGGTTCAGGTTGCGGAAATCGAAATCCGAGCGAGACAATCCTCGGCGGAAGATTTCGGCTGGCTCCCCATTCAAATCAGCATCCTTCATCCTCCAAATCTAGTTGAAATTCCACAACTCAGTATCAGGGAGTACCGCTTGTGGAACCTCGATATCCACGCTAATCCAACTAATCTTGCTTGGACAATGGAAAGAGCCACAGGTTTATCTCTCCATCGAATCAAATTAGCCGCATTTTTTATAAGCAAGCGTACCTCTGACCTACCATACACTAGTCTCAATCCCCCATCTATTTGAATGATTGGTCTCAACTCGAGAGGAAGAACTGGTGCAAGGATGTTCATTTGTATGTGTATCATATATAATATATATCACAAGTCTTGTGATAAGAAACAAATTTCACTGGCTTTTGCTACTATAACCTTCCCGACCACGATTTCTTATATGGAGAAGACTAAATTGTTTCAAGCACCTCTATTTTTTAAATAAATTGACAAAAGTTAGGTATTTTTTTTAATTTAGCATCTTTTTAATGAAGGACTCGATATATAATTTTAACTTTCATGTTTATGTCATTTGACTCATTTATCAATTTTTTTCTCTATTTTTTTTTCAAAATTTTTAAGCCTAATTTTATTTATTAAACTTGTTCGTTTATTTGGTTATATATAATTTTAATAAACATTTTCAAAATCTAGGCTAATTCTTCTTCTTTTTTTATTTTTGAAATTTGGCTAAGATTTCAAATATACTTTCAAGGGGTGAAAATCTTACTAATGAAATTGTAAAAAAACATGCATACTTTTTTAAAACATAAAACAAAAAATGAAATAGTTATCCAACGGTCTTTTATGCTTGATAGATGTTATTTATTTTTTTTAATTGATAAACAAATATATGTTTGGTAACTATTTGAGATTTTTTATCTTTTAAAAAGTTAGAGAGAAAAGTATGTACAAGTATAGAAATAAAAGATAGAGATGGAGAGAGCTTTTAGAGAGATAAAATTTGGTATGATAAAGAAAAAATTTAGATAAAGAAAAGTTCGAGAGGGATAAATAATATGTTAGAGAAAGAATATTAGAGAAAAAGAAAGACTTTAGAATAGATAAAGGGAAAGTCACAAGAAACATCTTTGAGGTCTTGGGTTCAAGTCACATGGAATGCAACTCCACCAAGTAATGACCTCTTGCATATGTACGGGTATGGAGACAGTGCGATGACTGCCGACTCCTAGGTAATAAAAAAAAAGGATAAAGTGAAAGAGAAACATTCTAGAAAGATAAGTTAGAAAATAAAATAAAGAAAGAATAGGAATAAGCTTAAAAAAACCGTTGACAACTTTGTCATAGACAAAATGACAATCGATCTTGATATGTTCCGTATGTTCATGAAAAATTGAGCAAGGGCACCATATTCTTCGCCCTCAGCAGCTAATAACAAAACGACGGGTGTTCGGATACCTCTATCTTTTTAATTCTAAAAACCTATCTACACTGCTACGTAAATTAGAAGAAAACAAGAGAATCTTACGCTATATTTAGGGGATGGTCCTTTTATTAACCACACATCCAAAATAGCACTCTCCTCTTCAAGACTAGAATAGATGAATAGAAGAAATGGAGGTGTTGGCTTGCTAGCAAATTATCATTTTTTTTTCTATTATTCAGGAATCAGTGATCCTTTGGCCTTTATGCTCCTATATCTGAGATATGCGCACGGTCGTCATATCCGTACATACGCAAGGAGCCATTCCTTGGTGAAGTTGCGTTCCATGCCCCTATACCTGAAGGATTGCTAG

mRNA sequence

ATGGGACCGGAGGAAGAAGAAGAAGGGCTCAATCGCAACAGTTTGTGCATCCCTTCTTGCGGGCATTTCAGTCAGCAAAAACCCTTCGCTGTTTTTGGAGTCTCTGAAGAGGAAAGAGAGAGAGAGAGAGTTAGAGAGAGAAACAGAGGGCGGGAAAGTTGGAGAAGAAGAGTGGGTTTTGCGGGTGTTGGAGATGGCGCTGTGGGGATGATGAAAATGGTTGCGGAAATCGAAATCCGAGCGAGACAATCCTCGGCGGAAGATTTCGGCTGGCTCCCCATTCAAATCAGCATCCTTCATCCTCCAAATCTAGTTGAAATTCCACAACTCAGTATCAGGGAGTACCGCTTGTGGAACCTCGATATCCACGCTAATCCAACTAATCTTGCTTGGACAATGGAAAGAGCCACAGGAATCAGTGATCCTTTGGCCTTTATGCTCCTATATCTGAGATATGCGCACGGTCGTCATATCCGTACATACGCAAGGAGCCATTCCTTGGTGAAGTTGCGTTCCATGCCCCTATACCTGAAGGATTGCTAG

Coding sequence (CDS)

ATGGGACCGGAGGAAGAAGAAGAAGGGCTCAATCGCAACAGTTTGTGCATCCCTTCTTGCGGGCATTTCAGTCAGCAAAAACCCTTCGCTGTTTTTGGAGTCTCTGAAGAGGAAAGAGAGAGAGAGAGAGTTAGAGAGAGAAACAGAGGGCGGGAAAGTTGGAGAAGAAGAGTGGGTTTTGCGGGTGTTGGAGATGGCGCTGTGGGGATGATGAAAATGGTTGCGGAAATCGAAATCCGAGCGAGACAATCCTCGGCGGAAGATTTCGGCTGGCTCCCCATTCAAATCAGCATCCTTCATCCTCCAAATCTAGTTGAAATTCCACAACTCAGTATCAGGGAGTACCGCTTGTGGAACCTCGATATCCACGCTAATCCAACTAATCTTGCTTGGACAATGGAAAGAGCCACAGGAATCAGTGATCCTTTGGCCTTTATGCTCCTATATCTGAGATATGCGCACGGTCGTCATATCCGTACATACGCAAGGAGCCATTCCTTGGTGAAGTTGCGTTCCATGCCCCTATACCTGAAGGATTGCTAG

Protein sequence

MGPEEEEEGLNRNSLCIPSCGHFSQQKPFAVFGVSEEERERERVRERNRGRESWRRRVGFAGVGDGAVGMMKMVAEIEIRARQSSAEDFGWLPIQISILHPPNLVEIPQLSIREYRLWNLDIHANPTNLAWTMERATGISDPLAFMLLYLRYAHGRHIRTYARSHSLVKLRSMPLYLKDC

Homology

The following BLAST results are available for this feature:

BLAST of MC11g_new0493.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0493.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0493.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0493.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 180..180

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g_new0493	MC11g_new0493	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g_new0493.1-cds	MC11g_new0493.1-cds-MC11:19250825..19251043	CDS
MC11g_new0493.1-cds	MC11g_new0493.1-cds-MC11:19251595..19251787	CDS
MC11g_new0493.1-cds	MC11g_new0493.1-cds-MC11:19253256..19253386	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g_new0493.1	MC11g_new0493.1-protein	polypeptide