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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GTGATCATCAACGAGGAGATAGGTGGACTTATCCAAGTAAGCCACGAAGAAGGTCAAGAGGATATCAAGGGCGAAGAATGCATCCACCACCAAATCAACGGGTAAAAGAGACCCAGTTGCCACTTTCTTGAAGGCGAGTTCAAAAGGAGATGCCCACGCTGAGTACACCACTAGCACTACCAGGAAAGTTTGCCACCACCTGCATCGCATCATCAATTCATTTCCGATTCATCTTCCAAAATGCATGATGAAAAAGTAAGTATGACATTTCTTTCTTTCTTTAGACTAGTTCTTCAAATTTTAACCATAGATATGACCAATTTATCTCAACATCTCCCACATGACATATCATTTATATTGAATGCGTTCTCTTTCAACCAATGAAATTAGCCTCATATTTGGTGAGTGAGAAGCAATATTTTGAAGGTTACAAAGACACTTTTTGGTCATGTGATGAAGTTAGTGTATGTACTTTTAAATCACTAATAATTTAGTTCCTGAACTTTAACCTCTAATAATTTAGTCCCTATAATTTAAAGTCTCATCAAAATTAAAGGTTCATTTTTAAGAAATAATTAAGTCTTTTATTATTTATACATACTCCTTCATCATTTTATTGATTTGCATATATAAGAAATTCTCTCAAATCTTAACAGACACTTTGAAAATACAAAAACTAAATTTTTCAACAACTAAGTTAGTTACGAATTTGAAAGTGCTTTTTTAACATATTTTGAATAAAGAACATGAAACTAGTAGCCTGTGATTAAGCTTCTGTATTATTTGCAGAAAATATGCTGTAAGATCAGGTAAACAAGGGGGCATGGATATATATAGATGTTATCTTGTAAAGATGGTATATTGAAAAATTGAAATTATACTCTTTCTTAGACTTTCATATCTACTTTCTTGTTTATGATATCATATAGTATATACTTACCGATATCTTCTGTCATAGGGAACTATAACGAACTTGTTCAGGTTTGAGTATCCATCGTTCACAACTGTTCCGAACGCCGGCAAGAGACTGCTGGAAACCGACGTCAAGTTCCTTATCTCGCCGCTTGAGTGCCGCCGGAAGAGCAACGGCAGCGGCGACCTTGTTTCAGACATTGCAGACATTCTGTTGCCGCCTCTGCTCTGCAGTTCTACGATCTAGAGAGAGAAGAAGAGCGAGAGAGAGAGAGAGAGAGAGTCTCGTTTTTCATGCATGCCCGAGACCGATTTAAAGAGGTA mRNA sequence ATGCATGATGAAAAAGGAACTATAACGAACTTGTTCAGGTTTGAGTATCCATCGTTCACAACTGTTCCGAACGCCGGCAAGAGACTGCTGGAAACCGACGTCAAGTTCCTTATCTCGCCGCTTGAGTGCCGCCGGAAGAGCAACGGCAGCGGCGACCTTGTTTCAGACATTGCAGACATTCTGTTGCCGCCTCTGCTCTGCAGTTCTACGATCTAG Coding sequence (CDS) ATGCATGATGAAAAAGGAACTATAACGAACTTGTTCAGGTTTGAGTATCCATCGTTCACAACTGTTCCGAACGCCGGCAAGAGACTGCTGGAAACCGACGTCAAGTTCCTTATCTCGCCGCTTGAGTGCCGCCGGAAGAGCAACGGCAGCGGCGACCTTGTTTCAGACATTGCAGACATTCTGTTGCCGCCTCTGCTCTGCAGTTCTACGATCTAG Protein sequence MHDEKGTITNLFRFEYPSFTTVPNAGKRLLETDVKFLISPLECRRKSNGSGDLVSDIADILLPPLLCSSTI
Homology
BLAST of MC11g_new0103.1 vs. NCBI nr
Match: KAG6591598.1 (hypothetical protein SDJN03_13944, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024490.1 hypothetical protein SDJN02_13306 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 86.7 bits (213), Expect = 4.07e-20 Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 0
Query: 1 MHDEKGTITNLFR--FEYPSFTTVPNAGKRLLETDVKFLISPLECRRKSNGSGDLVSDIA 60
M ++ G + +L + FEYPS TTVPNAGKRLLETDVKF ISPLECRR S G+GDLVSDI
Sbjct: 1 MPNQSGPLLSLAKSKFEYPSVTTVPNAGKRLLETDVKFFISPLECRRNSKGNGDLVSDIG 60
Query: 61 DILL 62
+++
Sbjct: 61 VVIV 64
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6591598.1 | 4.07e-20 | 65.63 | hypothetical protein SDJN03_13944, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MC11g_new0103.1-cds | MC11g_new0103.1-cds-MC11:3830220..3830234 | CDS |
| MC11g_new0103.1-cds | MC11g_new0103.1-cds-MC11:3830938..3831138 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MC11g_new0103.1 | MC11g_new0103.1-protein | polypeptide |
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