MC11g1113.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1113.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NAD(P)H dehydrogenase subunit M
Location	MC11: 9537652 .. 9539203 (+)
Sequence length	924
RNA-Seq Expression	MC11g1113.1
Synteny	MC11g1113.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAATCAGAAACTATAAAACAGAGCAACAAAAACCAACCATTTCTCGAGATAAAACATCACCATTTCCCTCAATTTTCCGCCATGGCAGCAGCTTCTTCTTACATGGTCTCTCCCATGGTGGGTTGGAGAGAACCCAAAGGGCACTCAAAACCCACAACCAGAAACAGAGTCCCCATCTCTGCTCAGGCCAATGAAGCGGCAGAGCAACTGAAAGTGGGAGAAAACGAGCAGGCACCGCCGCCGCCGCCGCCACCGCTGCGGCCGGTGGAAGTGCAGCAGAACGTGAAGAGCAAGAACATGAGCAGAGAATATGGAGGGCAGTGGCTGAGCAGCGTGACTCGGCATGTGAGAATCTATGCAGCTTACATAGACCCAATTACTTGTGAGTTCGATCAGACCCAAATGGATAAACTTACGCTCATTTTGGATCCCAGTAATGAGTTTCTTTGGAATCCCCAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAACTTGTTGATCACTATGAGGTACTTTTTGATTTTGTTTTTGTTTTTTTCCTTCTCTCTTTTAAATTTGATTATTTTAGTGGGTTTTGAGAGTGGTTTAAATTCGGGTTTGAAATTGTTGATGCGTGATTCTAGACGATGGATTAGATGCGGTTGATAATTGCATGTTAATGTGATCGGAGAGAGCTGTTAAGGTTGAAAGTAGTGATGGAGAGTGGGGGTTATATTGGTGTAACGAATATGTCAATTAACATGGTGCTATGTCCACTTTGACGGCCATACATCTCTAGGTTCATTATCAATAAAAAATTCTCTTTTTCTACATTTTTGGTTCAAAGATGGAGGGTGGCGAGTAATCTAAATGTTTGAAAAATACTTGTCTCCTCTCAACAATGAGGAGGAGTTTTGTTGTCCTGACAAGGGAGAGAAATACAAATATAAAGAATTTTTTTTAAATAATAATGAATTGTCAAATATTCAATAGTAAGAGGACATCCTCATCGTTGAGTAGCCAAGTATTTTCCTAAATAGTTGAGTTCGACAAAGTTAAAAGAAAATGGTTCTTTTTCTTTTCTTTTTGCTTGCTTGGTGTTTACGTTAATGGTATTTGAATTTGGTTCTGATTGAGCATGTTACACTTGGAAATCAGGGGGCTCCATTGACAGAATATACACTTCGGCTAATCGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAAGGTTCTCAACTTCAGCATGGGAAAGCCCAGAATTATGTTCAATAACAATGATCTGCCTCAGCCAAATCAATAAATTATATATAGTTAACTAATGCAAAATTATATGTGTTACATAATAATATTCAATGTGTTGTGTTCTAAATACAATCACAATTCTGTTTCATTCTGATGCTGTAGTGCAGTCTTCAGCAGTTCATAAGATCTAAGGTAGCTTTTATAAGTTAACTAAATAAATAAGGCAGCCCGCTTCTGTCTTTGGAAATCGAGGGCTCGTAAAGGCTACTTTCATCTATGTATTTCAT

mRNA sequence

AAAAGAAATCAGAAACTATAAAACAGAGCAACAAAAACCAACCATTTCTCGAGATAAAACATCACCATTTCCCTCAATTTTCCGCCATGGCAGCAGCTTCTTCTTACATGGTCTCTCCCATGGTGGGTTGGAGAGAACCCAAAGGGCACTCAAAACCCACAACCAGAAACAGAGTCCCCATCTCTGCTCAGGCCAATGAAGCGGCAGAGCAACTGAAAGTGGGAGAAAACGAGCAGGCACCGCCGCCGCCGCCGCCACCGCTGCGGCCGGTGGAAGTGCAGCAGAACGTGAAGAGCAAGAACATGAGCAGAGAATATGGAGGGCAGTGGCTGAGCAGCGTGACTCGGCATGTGAGAATCTATGCAGCTTACATAGACCCAATTACTTGTGAGTTCGATCAGACCCAAATGGATAAACTTACGCTCATTTTGGATCCCAGTAATGAGTTTCTTTGGAATCCCCAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAACTTGTTGATCACTATGAGGGGGCTCCATTGACAGAATATACACTTCGGCTAATCGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAAGGTTCTCAACTTCAGCATGGGAAAGCCCAGAATTATGTTCAATAACAATGATCTGCCTCAGCCAAATCAATAAATTATATATAGTTAACTAATGCAAAATTATATGTGTTACATAATAATATTCAATGTGTTGTGTTCTAAATACAATCACAATTCTGTTTCATTCTGATGCTGTAGTGCAGTCTTCAGCAGTTCATAAGATCTAAGGTAGCTTTTATAAGTTAACTAAATAAATAAGGCAGCCCGCTTCTGTCTTTGGAAATCGAGGGCTCGTAAAGGCTACTTTCATCTATGTATTTCAT

Coding sequence (CDS)

ATGGCAGCAGCTTCTTCTTACATGGTCTCTCCCATGGTGGGTTGGAGAGAACCCAAAGGGCACTCAAAACCCACAACCAGAAACAGAGTCCCCATCTCTGCTCAGGCCAATGAAGCGGCAGAGCAACTGAAAGTGGGAGAAAACGAGCAGGCACCGCCGCCGCCGCCGCCACCGCTGCGGCCGGTGGAAGTGCAGCAGAACGTGAAGAGCAAGAACATGAGCAGAGAATATGGAGGGCAGTGGCTGAGCAGCGTGACTCGGCATGTGAGAATCTATGCAGCTTACATAGACCCAATTACTTGTGAGTTCGATCAGACCCAAATGGATAAACTTACGCTCATTTTGGATCCCAGTAATGAGTTTCTTTGGAATCCCCAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAACTTGTTGATCACTATGAGGGGGCTCCATTGACAGAATATACACTTCGGCTAATCGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAAGGTTCTCAACTTCAGCATGGGAAAGCCCAGAATTATGTTCAATAACAATGATCTGCCTCAGCCAAATCAATAA

Protein sequence

MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPPPPLRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKVLNFSMGKPRIMFNNNDLPQPNQ

Homology

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BLAST of MC11g1113.1 vs. ExPASy Swiss-Prot
Match: A7NVJ4 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhM PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-70
Identity = 143/206 (69.42%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 1   MAAASSYMVS---PMVGWREPKGHSKPTTRNRVPISAQAN-EAAEQLKVGENEQAPPPPP 60
           MAA SSY       M+GW   K   +      +    QA  E ++Q+   E EQ      
Sbjct: 1   MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEEQEKMKQQ 60

Query: 61  PPL---RPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTL 120
                 RPVE Q NVKSKNMSREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL
Sbjct: 61  GKQKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL 120

Query: 121 ILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIK 180
           ILDP+NEF+W  +TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIK
Sbjct: 121 ILDPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIK 180

Query: 181 YNMNAKVLNFSMGKPRIMFNNNDLPQ 200
           YNMNA+VLNFSMGKPRI+FN+  LPQ
Sbjct: 181 YNMNARVLNFSMGKPRILFNDG-LPQ 205

[Close]

BLAST of MC11g1113.1 vs. ExPASy Swiss-Prot
Match: A9PJQ8 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 6.9e-70
Identity = 138/199 (69.35%), Postives = 154/199 (77.39%), Query Frame = 0


Query: 1   MAAASSYMVS---PMVGWREPKGHSKPTTRNRVPISAQAN-EAAEQLKVGENEQAPPPPP 60
           MAA+SSYM      M+GW    G  +   R  + +S Q   E  E  +V   E+     P
Sbjct: 1   MAASSSYMACAKFSMLGWL--GGRRELKMRRVISVSPQEQAEVQESQEVNAQEEEKVKQP 60

Query: 61  PPLRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
              RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP TCEFDQTQ DKLTLILD
Sbjct: 61  VQPRPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           P++EF+W  +TC KVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKYNM
Sbjct: 121 PTDEFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNM 180

Query: 181 NAKVLNFSMGKPRIMFNNN 196
           NA+VLNFSMGKPRI+FNN+
Sbjct: 181 NARVLNFSMGKPRILFNND 197

[Close]

BLAST of MC11g1113.1 vs. ExPASy Swiss-Prot
Match: Q2V2S7 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.4e-64
Identity = 116/160 (72.50%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 38  EAAEQLKVGENEQAPPPPPPPLRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYID 97
           +  E LK  ++ +     P PLRPVE Q NVKSK M  ++GGQWLSSVTRHVRIYAAYID
Sbjct: 47  QETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYID 106

Query: 98  PITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGS 157
           P TCEFDQ+QMDKLTLILDP+ EF+W+ ++CNKVY+YFQELVDHYEGAPLTEYTLRLIGS
Sbjct: 107 PETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGS 166

Query: 158 DIEHYIRKMLYDGEIKYNMNAKVLNFSMGKPRIMFNNNDL 198
           D+EHYIRKML+DGEI+YNM+A+VLNFSMGKPR+ FN +++
Sbjct: 167 DVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205

[Close]

BLAST of MC11g1113.1 vs. ExPASy Swiss-Prot
Match: A2XVZ1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=ndhM PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-57
Identity = 112/181 (61.88%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 35  QANEAAEQLKVGENEQA----PPPPPP-------------PLRPVEVQQNVKSKNMSREY 94
           +A +  +Q+K  E E A    PPPP               P +P+ VQ   +SKNMSREY
Sbjct: 37  RAQDQQQQVKEEEEEAAVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREY 96

Query: 95  GGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQE 154
           GGQWLS  TRH+RIYAAYI+P T  FDQTQMDKLTL+LDP++EF+W  +TC KVY  FQ+
Sbjct: 97  GGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQD 156

Query: 155 LVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKVLNFSMGKPRIMFNNNDL 199
           LVDHYEGA L+EYTLRLIGSD+EH+IRK+LYDGEIKYNM ++VLNFSMGKPRI FN++ +
Sbjct: 157 LVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQI 216

[Close]

BLAST of MC11g1113.1 vs. ExPASy Swiss-Prot
Match: Q7FB12 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ndhM PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-57
Identity = 112/181 (61.88%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 35  QANEAAEQLKVGENEQA----PPPPPP-------------PLRPVEVQQNVKSKNMSREY 94
           +A +  +Q+K  E E A    PPPP               P +P+ VQ   +SKNMSREY
Sbjct: 37  RAQDQQQQVKEEEEEAAVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREY 96

Query: 95  GGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQE 154
           GGQWLS  TRH+RIYAAYI+P T  FDQTQMDKLTL+LDP++EF+W  +TC KVY  FQ+
Sbjct: 97  GGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQD 156

Query: 155 LVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKVLNFSMGKPRIMFNNNDL 199
           LVDHYEGA L+EYTLRLIGSD+EH+IRK+LYDGEIKYNM ++VLNFSMGKPRI FN++ +
Sbjct: 157 LVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQI 216

[Close]

BLAST of MC11g1113.1 vs. NCBI nr
Match: XP_022139618.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Momordica charantia])

HSP 1 Score: 418 bits (1075), Expect = 1.02e-147
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPPPPLR 60
           MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPPPPLR
Sbjct: 1   MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPPPPLR 60

Query: 61  PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE 120
           PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE
Sbjct: 61  PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE 120

Query: 121 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV 180
           FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV
Sbjct: 121 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV 180

Query: 181 LNFSMGKPRIMFNNNDLPQPNQ 202
           LNFSMGKPRIMFNNNDLPQPNQ
Sbjct: 181 LNFSMGKPRIMFNNNDLPQPNQ 202

[Close]

BLAST of MC11g1113.1 vs. NCBI nr
Match: XP_022940621.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP_023523685.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6607714.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347 bits (889), Expect = 2.50e-119
Identity = 171/199 (85.93%), Postives = 181/199 (90.95%), Query Frame = 0


Query: 3   AASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQA--PPPPPPPLR 62
           AASSYMV  MVGW+  K +++P+ R   PISAQ NEAAEQLKVGE E+   P PPP PLR
Sbjct: 4   AASSYMVFSMVGWKNGKQNTRPSAR--FPISAQINEAAEQLKVGEEEEEAKPKPPPSPLR 63

Query: 63  PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE 122
           PVE Q NVKSKNMSREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPSNE
Sbjct: 64  PVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 123

Query: 123 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV 182
           FLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA+V
Sbjct: 124 FLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 183

Query: 183 LNFSMGKPRIMFNNNDLPQ 199
           LNFSMGKPRIMFN+NDLPQ
Sbjct: 184 LNFSMGKPRIMFNSNDLPQ 200

[Close]

BLAST of MC11g1113.1 vs. NCBI nr
Match: XP_022981611.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima])

HSP 1 Score: 346 bits (887), Expect = 4.87e-119
Identity = 171/198 (86.36%), Postives = 181/198 (91.41%), Query Frame = 0


Query: 3   AASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPP-PPLRP 62
           AASSYMV  MVGW+  K +++P+ R   PISAQ NEAAEQLKVGE E+A P PP  PLRP
Sbjct: 4   AASSYMVFSMVGWKNGKQNTRPSAR--FPISAQINEAAEQLKVGEEEEAKPKPPLSPLRP 63

Query: 63  VEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEF 122
           VE Q NVKSKNMSREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPSNEF
Sbjct: 64  VETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEF 123

Query: 123 LWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKVL 182
           LWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA+VL
Sbjct: 124 LWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL 183

Query: 183 NFSMGKPRIMFNNNDLPQ 199
           NFSMGKPRIMFN+NDLPQ
Sbjct: 184 NFSMGKPRIMFNSNDLPQ 199

[Close]

BLAST of MC11g1113.1 vs. NCBI nr
Match: KAG7037286.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343 bits (881), Expect = 4.15e-118
Identity = 170/199 (85.43%), Postives = 181/199 (90.95%), Query Frame = 0


Query: 3   AASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPPP--PLR 62
           AASSYMV  MVGW+  K +++P+ R   PISAQ NEAAEQLKVGE E+   P PP  PLR
Sbjct: 4   AASSYMVFSMVGWKNGKQNTRPSAR--FPISAQNNEAAEQLKVGEEEEEAKPKPPRSPLR 63

Query: 63  PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE 122
           PVE+Q NVKSKNMSREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPSNE
Sbjct: 64  PVEMQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 123

Query: 123 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV 182
           FLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA+V
Sbjct: 124 FLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 183

Query: 183 LNFSMGKPRIMFNNNDLPQ 199
           LNFSMGKPRIMFN+NDLPQ
Sbjct: 184 LNFSMGKPRIMFNSNDLPQ 200

[Close]

BLAST of MC11g1113.1 vs. NCBI nr
Match: XP_038899189.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida])

HSP 1 Score: 342 bits (876), Expect = 2.40e-117
Identity = 169/201 (84.08%), Postives = 179/201 (89.05%), Query Frame = 0


Query: 1   MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGEN--EQAPPPPPPP 60
           MA ASSYMV PMVGW+  K ++KP  + + PISAQ NEAAEQL +G+   E+   P P P
Sbjct: 1   MATASSYMVFPMVGWKNSKQNTKP--KPKFPISAQINEAAEQLNLGDQQKEEQGKPKPSP 60

Query: 61  LRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 120
           LRPVE QQNVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPS
Sbjct: 61  LRPVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPS 120

Query: 121 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180
           NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 121 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 180

Query: 181 KVLNFSMGKPRIMFNNNDLPQ 199
           +VLNFSMGKPRIMFN NDLPQ
Sbjct: 181 RVLNFSMGKPRIMFNANDLPQ 199

[Close]

BLAST of MC11g1113.1 vs. ExPASy TrEMBL
Match: A0A6J1CG25 (NAD(P)H dehydrogenase subunit M OS=Momordica charantia OX=3673 GN=LOC111010476 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 4.96e-148
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPPPPLR 60
           MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPPPPLR
Sbjct: 1   MAAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPPPPLR 60

Query: 61  PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE 120
           PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE
Sbjct: 61  PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE 120

Query: 121 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV 180
           FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV
Sbjct: 121 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV 180

Query: 181 LNFSMGKPRIMFNNNDLPQPNQ 202
           LNFSMGKPRIMFNNNDLPQPNQ
Sbjct: 181 LNFSMGKPRIMFNNNDLPQPNQ 202

[Close]

BLAST of MC11g1113.1 vs. ExPASy TrEMBL
Match: A0A6J1FIZ9 (NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE=3 SV=1)

HSP 1 Score: 347 bits (889), Expect = 1.21e-119
Identity = 171/199 (85.93%), Postives = 181/199 (90.95%), Query Frame = 0


Query: 3   AASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQA--PPPPPPPLR 62
           AASSYMV  MVGW+  K +++P+ R   PISAQ NEAAEQLKVGE E+   P PPP PLR
Sbjct: 4   AASSYMVFSMVGWKNGKQNTRPSAR--FPISAQINEAAEQLKVGEEEEEAKPKPPPSPLR 63

Query: 63  PVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNE 122
           PVE Q NVKSKNMSREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPSNE
Sbjct: 64  PVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 123

Query: 123 FLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKV 182
           FLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA+V
Sbjct: 124 FLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARV 183

Query: 183 LNFSMGKPRIMFNNNDLPQ 199
           LNFSMGKPRIMFN+NDLPQ
Sbjct: 184 LNFSMGKPRIMFNSNDLPQ 200

[Close]

BLAST of MC11g1113.1 vs. ExPASy TrEMBL
Match: A0A6J1IX15 (NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3 SV=1)

HSP 1 Score: 346 bits (887), Expect = 2.36e-119
Identity = 171/198 (86.36%), Postives = 181/198 (91.41%), Query Frame = 0


Query: 3   AASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGENEQAPPPPP-PPLRP 62
           AASSYMV  MVGW+  K +++P+ R   PISAQ NEAAEQLKVGE E+A P PP  PLRP
Sbjct: 4   AASSYMVFSMVGWKNGKQNTRPSAR--FPISAQINEAAEQLKVGEEEEAKPKPPLSPLRP 63

Query: 63  VEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEF 122
           VE Q NVKSKNMSREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPSNEF
Sbjct: 64  VETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEF 123

Query: 123 LWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAKVL 182
           LWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA+VL
Sbjct: 124 LWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVL 183

Query: 183 NFSMGKPRIMFNNNDLPQ 199
           NFSMGKPRIMFN+NDLPQ
Sbjct: 184 NFSMGKPRIMFNSNDLPQ 199

[Close]

BLAST of MC11g1113.1 vs. ExPASy TrEMBL
Match: A0A5D3D3P2 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002070 PE=3 SV=1)

HSP 1 Score: 338 bits (867), Expect = 3.25e-116
Identity = 169/201 (84.08%), Postives = 180/201 (89.55%), Query Frame = 0


Query: 2   AAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVG---ENEQAPPPPPPP 61
           AAASSY++  MVGW+  K ++K T R   PISAQ NEAAEQLKVG   E+++   P P P
Sbjct: 5   AAASSYIMFSMVGWKNGKQNTKHTLR--FPISAQLNEAAEQLKVGDQEEDQEQATPKPSP 64

Query: 62  LRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 121
           LRPVEVQQNVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPS
Sbjct: 65  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPS 124

Query: 122 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 181
           NEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 125 NEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 184

Query: 182 KVLNFSMGKPRIMFNNNDLPQ 199
           +VLNFSMGKPRIMFN NDLPQ
Sbjct: 185 RVLNFSMGKPRIMFNANDLPQ 203

[Close]

BLAST of MC11g1113.1 vs. ExPASy TrEMBL
Match: A0A1S3BGV5 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=1)

HSP 1 Score: 338 bits (867), Expect = 3.25e-116
Identity = 169/201 (84.08%), Postives = 180/201 (89.55%), Query Frame = 0


Query: 2   AAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVG---ENEQAPPPPPPP 61
           AAASSY++  MVGW+  K ++K T R   PISAQ NEAAEQLKVG   E+++   P P P
Sbjct: 5   AAASSYIMFSMVGWKNGKQNTKHTLR--FPISAQLNEAAEQLKVGDQEEDQEQATPKPSP 64

Query: 62  LRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 121
           LRPVEVQQNVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPS
Sbjct: 65  LRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPS 124

Query: 122 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 181
           NEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 125 NEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 184

Query: 182 KVLNFSMGKPRIMFNNNDLPQ 199
           +VLNFSMGKPRIMFN NDLPQ
Sbjct: 185 RVLNFSMGKPRIMFNANDLPQ 203

[Close]

BLAST of MC11g1113.1 vs. TAIR 10
Match: AT4G37925.1 (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex )

HSP 1 Score: 245.0 bits (624), Expect = 5.3e-65
Identity = 116/160 (72.50%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 38  EAAEQLKVGENEQAPPPPPPPLRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYID 97
           +  E LK  ++ +     P PLRPVE Q NVKSK M  ++GGQWLSSVTRHVRIYAAYID
Sbjct: 47  QETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYID 106

Query: 98  PITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGS 157
           P TCEFDQ+QMDKLTLILDP+ EF+W+ ++CNKVY+YFQELVDHYEGAPLTEYTLRLIGS
Sbjct: 107 PETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGS 166

Query: 158 DIEHYIRKMLYDGEIKYNMNAKVLNFSMGKPRIMFNNNDL 198
           D+EHYIRKML+DGEI+YNM+A+VLNFSMGKPR+ FN +++
Sbjct: 167 DVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205

The following BLAST results are available for this feature:

BLAST of MC11g1113.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7NVJ4	1.1e-70	69.42	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=297...	[more]
A9PJQ8	6.9e-70	69.35	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640...	[more]
Q2V2S7	7.4e-64	72.50	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana ...	[more]
A2XVZ1	1.4e-57	61.88	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. i...	[more]
Q7FB12	1.4e-57	61.88	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. j...	[more]

BLAST of MC11g1113.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139618.1	1.02e-147	100.00	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Momordica charantia]	[more]
XP_022940621.1	2.50e-119	85.93	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP...	[more]
XP_022981611.1	4.87e-119	86.36	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima]	[more]
KAG7037286.1	4.15e-118	85.43	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argy...	[more]
XP_038899189.1	2.40e-117	84.08	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida]	[more]

BLAST of MC11g1113.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG25	4.96e-148	100.00	NAD(P)H dehydrogenase subunit M OS=Momordica charantia OX=3673 GN=LOC111010476 P...	[more]
A0A6J1FIZ9	1.21e-119	85.93	NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE...	[more]
A0A6J1IX15	2.36e-119	86.36	NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3...	[more]
A0A5D3D3P2	3.25e-116	84.08	NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BGV5	3.25e-116	84.08	NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=...	[more]

BLAST of MC11g1113.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37925.1	5.3e-65	72.50	subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PFAM	PF10664	NdhM	coord: 82..190 e-value: 7.3E-45 score: 151.7
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PANTHER	PTHR36900	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC	coord: 1..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g1113	MC11g1113	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g1113.1-utr5	MC11g1113.1-utr5-MC11:9537652..9537737	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g1113.1-cds	MC11g1113.1-cds-MC11:9537738..9538166	CDS
MC11g1113.1-cds	MC11g1113.1-cds-MC11:9538795..9538974	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g1113.1-utr3	MC11g1113.1-utr3-MC11:9538975..9539203	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g1113.1	MC11g1113.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding