MC11g0758.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0758.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	serine/arginine-rich splicing factor SR45
Location	MC11: 6117170 .. 6119021 (+)
Sequence length	675
RNA-Seq Expression	MC11g0758.1
Synteny	MC11g0758.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAACCTTCTCCTGTACGCGAGTCCCTTGTTCTTCACATTGATGCACTTAGCAGGAATGTCCATGAGGGTCATTTAAGAGAAATATTCTGTATGGGTTTTCACTCGCTCTCTTAGTTTCTAAACAATTATCCTGATGGATAAATGAGCTTTTGTTTCCATATCATTTTATTTATGTTACAAGAAGAATACATTAATTAAAACCAAAAAGTAAGACAAAAGTACAAGTTTTATTTGCCAACTTGAGCATAGCTCAACTGGTTAAAGCATTATAATCTTGGCTAAAAGGTCAAAGGATCGAATCCCCGATCCCACACATTGATGAGCTTAACCCAAAAAAAAGTGCAAGTTAGATTTCAAGCTTCAAGCCTTCAACACATCCTTTGAAAGATATAACTCTTTGACTTCATGCACTTAGTATTTTTGTCTTACAAGAAAGACTTGGTATACCTGTTTGTTAGTAATGATACTTGACTATGTTGTTTCATTGGATAGGTATTAATTATTTTGTAAATTTCATATCATCAATGAAATTGTTTCCTATCCAAAAGAAATATACTTTACTATGTTGTTTTGTCCTTAAAAATGATTTATTTGCTATATTGATTGCTCTTCATCACCTCTGTTTGGTTAAGTCACTGCTTGCACATTCCTTCCTTTTCTCTCAACTATTTTTAAATTTTAGATTGGTTATTTTCATAAATTTTATAGCATATAATTAGTTAATTTATTAGTCACATTTAATCAGATGGGTCATCCTCGAAGGTGAATTTTCCTCCAAAAATCTCTTTATGGTTAATCCTGATGATTAGAGAAGTGAGTAGGTAATCTGTTACATTTGTTTTTTTCCAGCTCTTATGAATTTCAATTTTATGCCCTCTAGGTAACTTTGGCGAAGTAGTCAATGTTGAGCTGGCAATGGATCGTACAGTGAGTTTGCACCATGCGCGTTATATTTAAAGATCTTTTTCTTCAACAATACATTAATGCATCTGTTTAAAATGCTTATAGGTCAATCTTCCTAAAGGTTATGGATATGTTGAATTCAAAACGAGACCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGTAGGTTTTTCTAATAAATTCCACACGAGAATTTGAAATGCATCTATTGATAATGTCGTATCCATGGGAGTTGATTGTGCTGATTGGCTAATGTAGGCTCAAATTGATGGAAATGTTATTAGAGTGAGATTTACATTACCTCAAAGACAGAAGATGCCGACTCCTCCAAGGACTGTGGCGATTGCTCCAAAGAGAAATGGTCCCAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGGATGACATGAAAAGACAGAGAGAACGTATAACTCTTAATAAGTTCAAATGCTTTTGCTTATTATACTATTTTTTTTATGGGAGTATATTATATTAGTAATTTATTTCTGATTTGATACATCAGCTTCACCTCGTCGAAAACCTCCTTCACCTAGAAGGCGCTCACCTGTAGCTCGACGTGGTGGGTCTCCCCCTAGAAGACAACCCGATTCTCCACGCCGCCGTCCAGAGTCTCCTCCACGCCGCCGTGTCGAATCTCCTTTCCGTCGTGATTCTCCACCTAGAAGGAGGCCTGCATCGCCGATTAGAGGCCGTTCTCCATCCCCTTTGCCAAGGCGACATAGATCTCCTCCAAGGTTGGCCAATCATCCCCTGCCCCCAACACAACCCACACACACAAAATACCTTTCTTTTCTTTACATGGTGGTTTGAGTAGCATCAATATTGCTGAATTTTGGTTGATTAGGCCTTCTCCAAGAAGAATTCGTGGCAGTCCCGTTCGAAGACGTTCCCCACCTCCTCCT

mRNA sequence

AGGAAACCTTCTCCTGTACGCGAGTCCCTTGTTCTTCACATTGATGCACTTAGCAGGAATGTCCATGAGGGTCATTTAAGAGAAATATTCTGTAACTTTGGCGAAGTAGTCAATGTTGAGCTGGCAATGGATCGTACAGTCAATCTTCCTAAAGGTTATGGATATGTTGAATTCAAAACGAGACCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGCTCAAATTGATGGAAATGTTATTAGAGTGAGATTTACATTACCTCAAAGACAGAAGATGCCGACTCCTCCAAGGACTGTGGCGATTGCTCCAAAGAGAAATGGTCCCAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGGATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAACCTCCTTCACCTAGAAGGCGCTCACCTGTAGCTCGACGTGGTGGGTCTCCCCCTAGAAGACAACCCGATTCTCCACGCCGCCGTCCAGAGTCTCCTCCACGCCGCCGTGTCGAATCTCCTTTCCGTCGTGATTCTCCACCTAGAAGGAGGCCTGCATCGCCGATTAGAGGCCGTTCTCCATCCCCTTTGCCAAGGCGACATAGATCTCCTCCAAGGCCTTCTCCAAGAAGAATTCGTGGCAGTCCCGTTCGAAGACGTTCCCCACCTCCTCCT

Coding sequence (CDS)

AGGAAACCTTCTCCTGTACGCGAGTCCCTTGTTCTTCACATTGATGCACTTAGCAGGAATGTCCATGAGGGTCATTTAAGAGAAATATTCTGTAACTTTGGCGAAGTAGTCAATGTTGAGCTGGCAATGGATCGTACAGTCAATCTTCCTAAAGGTTATGGATATGTTGAATTCAAAACGAGACCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGCTCAAATTGATGGAAATGTTATTAGAGTGAGATTTACATTACCTCAAAGACAGAAGATGCCGACTCCTCCAAGGACTGTGGCGATTGCTCCAAAGAGAAATGGTCCCAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGGATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAACCTCCTTCACCTAGAAGGCGCTCACCTGTAGCTCGACGTGGTGGGTCTCCCCCTAGAAGACAACCCGATTCTCCACGCCGCCGTCCAGAGTCTCCTCCACGCCGCCGTGTCGAATCTCCTTTCCGTCGTGATTCTCCACCTAGAAGGAGGCCTGCATCGCCGATTAGAGGCCGTTCTCCATCCCCTTTGCCAAGGCGACATAGATCTCCTCCAAGGCCTTCTCCAAGAAGAATTCGTGGCAGTCCCGTTCGAAGACGTTCCCCACCTCCTCCT

Protein sequence

RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP

Homology

[Close]

BLAST of MC11g0758.1 vs. ExPASy Swiss-Prot
Match: Q9SEE9 (Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR45 PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.2e-68
Identity = 156/223 (69.96%), Postives = 180/223 (80.72%), Query Frame = 0


Query: 6   VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAE 65
           V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAE
Sbjct: 94  VQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAE 153

Query: 66  KAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKD-DMK 125
           KAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APKR+ PK +N  ADAEKD   +
Sbjct: 154 KAQLYMDGAQIDGKVVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPR 213

Query: 126 RQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPR 185
           R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPR
Sbjct: 214 RPRETSPQRKTGLSPRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPR 273

Query: 186 RRPASPIRGRSP-SPLPRRHRSPPRPSPRRIRGSPVRRRSPPP 225
           RRPASP RGRSP SP PRR+RSPPR SPRRIRGSPVRRRSP P
Sbjct: 274 RRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLP 310

[Close]

BLAST of MC11g0758.1 vs. ExPASy Swiss-Prot
Match: Q15287 (RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-16
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFK 60
           R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+
Sbjct: 154 RSPSP--KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFE 213

Query: 61  TRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAE 120
              +AEKA  +MDG QIDG  I     L      P PP      P+R  P P        
Sbjct: 214 NPDEAEKALKHMDGGQIDGQEITATAVL---APWPRPPPRRFSPPRRMLPPP-------- 273

Query: 121 KDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ 156
              M R+  P  RR+  SPRRRSPV RR  SP RR+
Sbjct: 274 --PMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRR 294

[Close]

BLAST of MC11g0758.1 vs. ExPASy Swiss-Prot
Match: Q4R5N1 (RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=RNPS1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-16
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFK 60
           R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+
Sbjct: 154 RSPSP--KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFE 213

Query: 61  TRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAE 120
              +AEKA  +MDG QIDG  I     L      P PP      P+R  P P        
Sbjct: 214 NPDEAEKALKHMDGGQIDGQEITATAVL---APWPRPPPRRFSPPRRMLPPP-------- 273

Query: 121 KDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ 156
              M R+  P  RR+  SPRRRSPV RR  SP RR+
Sbjct: 274 --PMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRR 294

[Close]

BLAST of MC11g0758.1 vs. ExPASy Swiss-Prot
Match: Q99M28 (RNA-binding protein with serine-rich domain 1 OS=Mus musculus OX=10090 GN=Rnps1 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-16
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFK 60
           R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+
Sbjct: 154 RSPSP--KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFE 213

Query: 61  TRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAE 120
              +AEKA  +MDG QIDG  I     L      P PP      P+R  P P        
Sbjct: 214 NPDEAEKALKHMDGGQIDGQEITATAVL---APWPRPPPRRFSPPRRMLPPP-------- 273

Query: 121 KDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ 156
              M R+  P  RR+  SPRRRSPV RR  SP RR+
Sbjct: 274 --PMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRR 294

[Close]

BLAST of MC11g0758.1 vs. ExPASy Swiss-Prot
Match: Q5NVM8 (RNA-binding protein with serine-rich domain 1 OS=Pongo abelii OX=9601 GN=RNPS1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-16
Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRT-VNLPKGYGYVEFK 60
           R PSP  +   +HI  L+RNV + H+ EIF  +G++  +++ ++R   +L KGY YVEF+
Sbjct: 154 RSPSP--KPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFE 213

Query: 61  TRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAE 120
              +AEKA  +MDG QIDG  I     L      P PP      P+R  P P        
Sbjct: 214 NPDEAEKALKHMDGGQIDGQEITATAVL---APWPRPPPRRFSPPRRMLPPP-------- 273

Query: 121 KDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQ 156
              M R+  P  RR+  SPRRRSPV RR  SP RR+
Sbjct: 274 --PMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRR 294

[Close]

BLAST of MC11g0758.1 vs. NCBI nr
Match: XP_022136031.1 (serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia])

HSP 1 Score: 422 bits (1085), Expect = 1.82e-145
Identity = 223/225 (99.11%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT
Sbjct: 102 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 161

Query: 61  RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEK 120
           RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKR+GPKPENVGA+AEK
Sbjct: 162 RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEK 221

Query: 121 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 180
           DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP
Sbjct: 222 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 281

Query: 181 PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 282 PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 326

[Close]

BLAST of MC11g0758.1 vs. NCBI nr
Match: XP_022136048.1 (serine/arginine-rich splicing factor SR45 isoform X4 [Momordica charantia])

HSP 1 Score: 416 bits (1069), Expect = 2.49e-143
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGY 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGY
Sbjct: 77  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 136

Query: 61  VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVG 120
           VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKR+GPKPENVG
Sbjct: 137 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 196

Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
           A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 197 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 256

Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 257 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 306

[Close]

BLAST of MC11g0758.1 vs. NCBI nr
Match: XP_022136040.1 (serine/arginine-rich splicing factor SR45 isoform X3 [Momordica charantia])

HSP 1 Score: 416 bits (1069), Expect = 2.66e-143
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGY 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGY
Sbjct: 79  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 138

Query: 61  VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVG 120
           VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKR+GPKPENVG
Sbjct: 139 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 198

Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
           A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 199 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 258

Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 259 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 308

[Close]

BLAST of MC11g0758.1 vs. NCBI nr
Match: XP_022136021.1 (serine/arginine-rich splicing factor SR45 isoform X1 [Momordica charantia])

HSP 1 Score: 416 bits (1069), Expect = 5.80e-143
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGY 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGY
Sbjct: 102 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 161

Query: 61  VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVG 120
           VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKR+GPKPENVG
Sbjct: 162 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 221

Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
           A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 222 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 281

Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 282 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 331

[Close]

BLAST of MC11g0758.1 vs. NCBI nr
Match: XP_038899577.1 (serine/arginine-rich splicing factor SR45-like [Benincasa hispida])

HSP 1 Score: 389 bits (1000), Expect = 1.29e-132
Identity = 213/226 (94.25%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKT
Sbjct: 98  RKPSPVRESLVLHIDALSRNVHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKT 157

Query: 61  RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEK 120
           R DAEKAQVYMDGAQIDGNVIR RFTLPQRQKMPTPPRTVA  PKR GPK +NVG DAEK
Sbjct: 158 RSDAEKAQVYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVPKREGPKLDNVGPDAEK 217

Query: 121 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 180
           DDMKRQREPSPRRKPPSPRRRSPVARRGGSP RRQPDSPRRRPESPPRRRVESPFRRDSP
Sbjct: 218 DDMKRQREPSPRRKPPSPRRRSPVARRGGSP-RRQPDSPRRRPESPPRRRVESPFRRDSP 277

Query: 181 PRRRPASPIRG-RSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           PRRRPASP+RG RSPSPL RRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 278 PRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRGSPVRRRSPPPP 322

[Close]

BLAST of MC11g0758.1 vs. ExPASy TrEMBL
Match: A0A6J1C2D4 (serine/arginine-rich splicing factor SR45 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 8.79e-146
Identity = 223/225 (99.11%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT
Sbjct: 102 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 161

Query: 61  RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEK 120
           RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKR+GPKPENVGA+AEK
Sbjct: 162 RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEK 221

Query: 121 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 180
           DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP
Sbjct: 222 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 281

Query: 181 PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 282 PRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 326

[Close]

BLAST of MC11g0758.1 vs. ExPASy TrEMBL
Match: A0A6J1C6J2 (serine/arginine-rich splicing factor SR45 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 1.21e-143
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGY 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGY
Sbjct: 77  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 136

Query: 61  VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVG 120
           VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKR+GPKPENVG
Sbjct: 137 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 196

Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
           A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 197 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 256

Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 257 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 306

[Close]

BLAST of MC11g0758.1 vs. ExPASy TrEMBL
Match: A0A6J1C2R4 (serine/arginine-rich splicing factor SR45 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 1.29e-143
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGY 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGY
Sbjct: 79  RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 138

Query: 61  VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVG 120
           VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKR+GPKPENVG
Sbjct: 139 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 198

Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
           A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 199 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 258

Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 259 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 308

[Close]

BLAST of MC11g0758.1 vs. ExPASy TrEMBL
Match: A0A6J1C2C4 (serine/arginine-rich splicing factor SR45 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 2.81e-143
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV-----NLPKGYGY 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTV     NLPKGYGY
Sbjct: 102 RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGY 161

Query: 61  VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVG 120
           VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKR+GPKPENVG
Sbjct: 162 VEFKTRPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVG 221

Query: 121 ADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 180
           A+AEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF
Sbjct: 222 ANAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPF 281

Query: 181 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 282 RRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 331

[Close]

BLAST of MC11g0758.1 vs. ExPASy TrEMBL
Match: A0A0A0KZM9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV=1)

HSP 1 Score: 389 bits (998), Expect = 1.30e-132
Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   RKPSPVRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKT 60
           RKPSPVRESLVLHIDALSRNVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKT
Sbjct: 98  RKPSPVRESLVLHIDALSRNVHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKT 157

Query: 61  RPDAEKAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEK 120
           R DAEKAQVYMDGAQIDGNVIR RFTLPQRQKMPTPPRTVA  PKR+GPKPENVG DAEK
Sbjct: 158 RSDAEKAQVYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEK 217

Query: 121 DDMKRQREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSP 180
           DDMKRQREPSPRRKPPSPRRRSPVARRGGSP RRQPDSPRRRP+SPPRRR+ESPFRRDSP
Sbjct: 218 DDMKRQREPSPRRKPPSPRRRSPVARRGGSP-RRQPDSPRRRPDSPPRRRIESPFRRDSP 277

Query: 181 P-RRRPASPIRG-RSPSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPP 225
           P RRRPASP+RG RSPSPL RRHRSPPRPSPRRIRGSPVRRRSPPPP
Sbjct: 278 PPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRGSPVRRRSPPPP 323

[Close]

BLAST of MC11g0758.1 vs. TAIR 10
Match: AT1G16610.1 (arginine/serine-rich 45 )

HSP 1 Score: 258.5 bits (659), Expect = 5.1e-69
Identity = 156/223 (69.96%), Postives = 180/223 (80.72%), Query Frame = 0


Query: 6   VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAE 65
           V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAE
Sbjct: 94  VQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAE 153

Query: 66  KAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKD-DMK 125
           KAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APKR+ PK +N  ADAEKD   +
Sbjct: 154 KAQLYMDGAQIDGKVVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPR 213

Query: 126 RQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPR 185
           R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPR
Sbjct: 214 RPRETSPQRKTGLSPRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPR 273

Query: 186 RRPASPIRGRSP-SPLPRRHRSPPRPSPRRIRGSPVRRRSPPP 225
           RRPASP RGRSP SP PRR+RSPPR SPRRIRGSPVRRRSP P
Sbjct: 274 RRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLP 310

[Close]

BLAST of MC11g0758.1 vs. TAIR 10
Match: AT1G16610.3 (arginine/serine-rich 45 )

HSP 1 Score: 258.5 bits (659), Expect = 5.1e-69
Identity = 156/223 (69.96%), Postives = 180/223 (80.72%), Query Frame = 0


Query: 6   VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAE 65
           V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAE
Sbjct: 94  VQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAE 153

Query: 66  KAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKD-DMK 125
           KAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APKR+ PK +N  ADAEKD   +
Sbjct: 154 KAQLYMDGAQIDGKVVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPR 213

Query: 126 RQREPSPRRKPP-SPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPR 185
           R RE SP+RK   SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPR
Sbjct: 214 RPRETSPQRKTGLSPRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPR 273

Query: 186 RRPASPIRGRSP-SPLPRRHRSPPRPSPRRIRGSPVRRRSPPP 225
           RRPASP RGRSP SP PRR+RSPPR SPRRIRGSPVRRRSP P
Sbjct: 274 RRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLP 310

[Close]

BLAST of MC11g0758.1 vs. TAIR 10
Match: AT1G16610.2 (arginine/serine-rich 45 )

HSP 1 Score: 251.9 bits (642), Expect = 4.8e-67
Identity = 152/221 (68.78%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 6   VRESLVLHIDALSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAE 65
           V+ESLVLH+D+LSRNV+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R DAE
Sbjct: 94  VQESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAE 153

Query: 66  KAQVYMDGAQIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKDDMKR 125
           KAQ+YMDGAQIDG V++  FTLP RQK+ +PP+ V+ APKR+ PK +N  ADAEKD   R
Sbjct: 154 KAQLYMDGAQIDGKVVKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPR 213

Query: 126 QREPSPRRKPPSPRRRSPVARRGGSPPRRQPDSP-RRRPESPPRRRVESPFRRDSPPRRR 185
           +    PR +  SPRRRSP+ RRG SP RR PDSP RRRP SP RR      R D+PPRRR
Sbjct: 214 R----PRER-LSPRRRSPLPRRGLSPRRRSPDSPHRRRPGSPIRR------RGDTPPRRR 273

Query: 186 PASPIRGRSP-SPLPRRHRSPPRPSPRRIRGSPVRRRSPPP 225
           PASP RGRSP SP PRR+RSPPR SPRRIRGSPVRRRSP P
Sbjct: 274 PASPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPVRRRSPLP 303

[Close]

BLAST of MC11g0758.1 vs. TAIR 10
Match: AT2G29210.1 (splicing factor PWI domain-containing protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 62/148 (41.89%), Postives = 77/148 (52.03%), Query Frame = 0


Query: 88  PQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARR 147
           P+R+++ +P R+ + +P R   +P + G        +R+R PS    PP+ RRRSP    
Sbjct: 272 PRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPS----PPARRRRSP---- 331

Query: 148 GGSPPRRQPDSPRRRPESPPRRRVESPF------RRDSPPRRRPASP---IRGRSPSPLP 207
             SPP R     RRR  SPP RR  SP       R  SPP RR  SP    R RSPSP  
Sbjct: 332 --SPPAR-----RRRSPSPPARRHRSPTPPARQRRSPSPPARRHRSPPPARRRRSPSPPA 391

Query: 208 RRHRSPPRPSPRRIRGSPV--RRRSPPP 225
           RR RSP  P+ RR   SP+  R RSP P
Sbjct: 392 RRRRSPSPPARRRRSPSPLYRRNRSPSP 404

[Close]

BLAST of MC11g0758.1 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 71/232 (30.60%), Postives = 99/232 (42.67%), Query Frame = 0


Query: 17  LSRNVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQI 76
           L  +  +  LR  F  FG V ++ L  D     P+G+G+++F    DA +A+  MDG  +
Sbjct: 44  LRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLL 103

Query: 77  DGNVIRVRFTLPQRQKMPTPPRTVAIAPKRNGPKPENVGADAEKDDMKRQREPSPRR--- 136
            G  + V F    R+K PT  RT      R+     N   D  +   +  R P PRR   
Sbjct: 104 LGRELTVVFAEENRKK-PTEMRT------RDRGGRSNRFQDRRRSPPRYSRSPPPRRGRR 163

Query: 137 ---------KPPSPRRRSPVARRGGSPPRRQPDSPRRRPESPP--------------RRR 196
                     PP+ R +S    R  SP  R+ +  R    SPP              +  
Sbjct: 164 SRSRSRGYNSPPAKRHQS----RSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSH 223

Query: 197 VESPFRRDSPPRRRPASPIRGRSPSPLPRRHRSPPRPSPRRIRGSPVRRRSP 223
             SP R  SP + R  +P + RS SP+PR+ RS P P P   RG+    RSP
Sbjct: 224 SRSPRRSVSPRKNRSYTPEQARSQSPVPRQSRS-PTPVP---RGAQNGDRSP 260

The following BLAST results are available for this feature:

BLAST of MC11g0758.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEE9	7.2e-68	69.96	Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR4...	[more]
Q15287	2.2e-16	40.38	RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 P...	[more]
Q4R5N1	2.2e-16	40.38	RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=...	[more]
Q99M28	2.2e-16	40.38	RNA-binding protein with serine-rich domain 1 OS=Mus musculus OX=10090 GN=Rnps1 ...	[more]
Q5NVM8	2.2e-16	40.38	RNA-binding protein with serine-rich domain 1 OS=Pongo abelii OX=9601 GN=RNPS1 P...	[more]

BLAST of MC11g0758.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136031.1	1.82e-145	99.11	serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia]	[more]
XP_022136048.1	2.49e-143	96.96	serine/arginine-rich splicing factor SR45 isoform X4 [Momordica charantia]	[more]
XP_022136040.1	2.66e-143	96.96	serine/arginine-rich splicing factor SR45 isoform X3 [Momordica charantia]	[more]
XP_022136021.1	5.80e-143	96.96	serine/arginine-rich splicing factor SR45 isoform X1 [Momordica charantia]	[more]
XP_038899577.1	1.29e-132	94.25	serine/arginine-rich splicing factor SR45-like [Benincasa hispida]	[more]

BLAST of MC11g0758.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2D4	8.79e-146	99.11	serine/arginine-rich splicing factor SR45 isoform X2 OS=Momordica charantia OX=3...	[more]
A0A6J1C6J2	1.21e-143	96.96	serine/arginine-rich splicing factor SR45 isoform X4 OS=Momordica charantia OX=3...	[more]
A0A6J1C2R4	1.29e-143	96.96	serine/arginine-rich splicing factor SR45 isoform X3 OS=Momordica charantia OX=3...	[more]
A0A6J1C2C4	2.81e-143	96.96	serine/arginine-rich splicing factor SR45 isoform X1 OS=Momordica charantia OX=3...	[more]
A0A0A0KZM9	1.30e-132	93.83	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV...	[more]

BLAST of MC11g0758.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16610.1	5.1e-69	69.96	arginine/serine-rich 45	[more]
AT1G16610.3	5.1e-69	69.96	arginine/serine-rich 45	[more]
AT1G16610.2	4.8e-67	68.78	arginine/serine-rich 45	[more]
AT2G29210.1	1.5e-04	41.89	splicing factor PWI domain-containing protein	[more]
AT3G13570.1	2.0e-04	30.60	SC35-like splicing factor 30A	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 11..84 e-value: 1.3E-18 score: 77.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 14..82 e-value: 3.5E-13 score: 49.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 10..88 score: 15.95436
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..94 e-value: 4.6E-21 score: 77.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..135
None	No IPR available	PANTHER	PTHR15481:SF9	BNAA09G56240D PROTEIN	coord: 4..224
None	No IPR available	PANTHER	PTHR15481	RIBONUCLEIC ACID BINDING PROTEIN S1	coord: 4..224
IPR034201	RNPS1, RNA recognition motif	CDD	cd12365	RRM_RNPS1	coord: 12..84 e-value: 1.62535E-37 score: 123.82
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..104

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0758	MC11g0758	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0758.1-cds	MC11g0758.1-cds-MC11:6117170..6117260	CDS
MC11g0758.1-cds	MC11g0758.1-cds-MC11:6118053..6118099	CDS
MC11g0758.1-cds	MC11g0758.1-cds-MC11:6118181..6118261	CDS
MC11g0758.1-cds	MC11g0758.1-cds-MC11:6118358..6118523	CDS
MC11g0758.1-cds	MC11g0758.1-cds-MC11:6118622..6118853	CDS
MC11g0758.1-cds	MC11g0758.1-cds-MC11:6118964..6119021	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0758.1	MC11g0758.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding