MC11g0750.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0750.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Seed maturation protein
Location	MC11: 6067011 .. 6067301 (+)
Sequence length	291
RNA-Seq Expression	MC11g0750.1
Synteny	MC11g0750.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGAGCAAGGACGATATCAAGTACGGAGTTGCTCAAGCCAAATTGTCCGAAGACGAAGCCCTAAGAGTTGCTTACAAGCACGGCACGCCGCTCGAATCCGGCAAAATCGCCGACTCCGATCCTGTCGATCTCTTTTCCAGTGCAAGCAGAATCTCACGCGATTCTTCTACTGCCGATCGTTCTTCCTCCGCCGCCGCCGCTACTCAATCTCAACCGCGGCGAGAGGATCCTAGCAATGAAGGAGGAAGAGAATCCGATGCTGCTGATCCCGCCGCCGCCGGCCGA

mRNA sequence

ATGGCGAAGAGCAAGGACGATATCAAGTACGGAGTTGCTCAAGCCAAATTGTCCGAAGACGAAGCCCTAAGAGTTGCTTACAAGCACGGCACGCCGCTCGAATCCGGCAAAATCGCCGACTCCGATCCTGTCGATCTCTTTTCCAGTGCAAGCAGAATCTCACGCGATTCTTCTACTGCCGATCGTTCTTCCTCCGCCGCCGCCGCTACTCAATCTCAACCGCGGCGAGAGGATCCTAGCAATGAAGGAGGAAGAGAATCCGATGCTGCTGATCCCGCCGCCGCCGGCCGA

Coding sequence (CDS)

ATGGCGAAGAGCAAGGACGATATCAAGTACGGAGTTGCTCAAGCCAAATTGTCCGAAGACGAAGCCCTAAGAGTTGCTTACAAGCACGGCACGCCGCTCGAATCCGGCAAAATCGCCGACTCCGATCCTGTCGATCTCTTTTCCAGTGCAAGCAGAATCTCACGCGATTCTTCTACTGCCGATCGTTCTTCCTCCGCCGCCGCCGCTACTCAATCTCAACCGCGGCGAGAGGATCCTAGCAATGAAGGAGGAAGAGAATCCGATGCTGCTGATCCCGCCGCCGCCGGCCGA

Protein sequence

MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTADRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR

Homology

[Close]

BLAST of MC11g0750.1 vs. ExPASy Swiss-Prot
Match: Q9LE44 (SEED MATURATION PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=SMP1 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-17
Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
          MAK+KDDIKY  AQAKLSEDEA+RV+YKHGTPLE GKIA+S+PV+LFSSA RI +     
Sbjct: 1  MAKNKDDIKYATAQAKLSEDEAIRVSYKHGTPLEGGKIAESEPVELFSSAQRIEK----- 60

Query: 61 DRSSSAAAATQSQPRREDPSNEGGRESDA 90
           +  SAA+  Q+Q +R+    +G R  D+
Sbjct: 61 GKEQSAASGDQTQIQRDIKDIKGTRTDDS 84

[Close]

BLAST of MC11g0750.1 vs. NCBI nr
Match: XP_022137261.1 (uncharacterized protein LOC111008762 [Momordica charantia])

HSP 1 Score: 174 bits (442), Expect = 1.36e-54
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
          MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA
Sbjct: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60

Query: 61 DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97
          DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR
Sbjct: 61 DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97

[Close]

BLAST of MC11g0750.1 vs. NCBI nr
Match: XP_022940123.1 (uncharacterized protein LOC111445841 [Cucurbita moschata])

HSP 1 Score: 108 bits (270), Expect = 2.37e-28
Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
          MAKSKDDI YG AQAKLSEDE+LRVAYKHGTPLESGKIAD++ VDLFSSA  IS+D S  
Sbjct: 1  MAKSKDDITYGAAQAKLSEDESLRVAYKHGTPLESGKIADAETVDLFSSAQNISQDRSAG 60

Query: 61 DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97
            S++A  +  +Q RR D ++EGG   D ADP+A  R
Sbjct: 61 RSSAAATESITNQLRRGDTTSEGGTGCDTADPSAGRR 97

[Close]

BLAST of MC11g0750.1 vs. NCBI nr
Match: KAG7037482.1 (hypothetical protein SDJN02_01109, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108 bits (269), Expect = 3.36e-28
Identity = 62/97 (63.92%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
          MAKSKDDI YG AQAKLSEDE+LR+AYKHGTPLESGKIAD++ VDLFSSA  IS+D S  
Sbjct: 1  MAKSKDDITYGAAQAKLSEDESLRIAYKHGTPLESGKIADAETVDLFSSAQNISQDRSAG 60

Query: 61 DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97
            S++A  +  +Q RR D ++EGG   D ADP+A  R
Sbjct: 61 RSSAAATESITNQLRRGDTNSEGGTGCDTADPSAGRR 97

[Close]

BLAST of MC11g0750.1 vs. NCBI nr
Match: KAG6607969.1 (hypothetical protein SDJN03_01311, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108 bits (269), Expect = 8.43e-28
Identity = 62/97 (63.92%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1   MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
           MAKSKDDI YG AQAKLSEDE+LR+AYKHGTPLESGKIAD++ VDLFSSA  IS+D S  
Sbjct: 33  MAKSKDDITYGAAQAKLSEDESLRIAYKHGTPLESGKIADAETVDLFSSAQNISQDRSAG 92

Query: 61  DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97
             S++A  +  +Q RR D ++EGG   D ADP+A  R
Sbjct: 93  RSSAAATESITNQLRRGDTNSEGGTGCDTADPSAGRR 129

[Close]

BLAST of MC11g0750.1 vs. NCBI nr
Match: XP_023525086.1 (uncharacterized protein LOC111788801 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 106 bits (264), Expect = 1.94e-27
Identity = 63/97 (64.95%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
          MAKSKDDI YG AQAKLSEDEALRVAYK GTPLESGKIAD++ VDLFSSA  IS+D S  
Sbjct: 1  MAKSKDDITYGAAQAKLSEDEALRVAYKDGTPLESGKIADAETVDLFSSAQNISQDRSAG 60

Query: 61 DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97
            S++A  +  +Q RR D ++EGG   D ADP+A  R
Sbjct: 61 RSSAAATESITNQLRRGDTNSEGGTGCDTADPSAGRR 97

[Close]

BLAST of MC11g0750.1 vs. ExPASy TrEMBL
Match: A0A6J1C618 (uncharacterized protein LOC111008762 OS=Momordica charantia OX=3673 GN=LOC111008762 PE=4 SV=1)

HSP 1 Score: 174 bits (442), Expect = 6.57e-55
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
          MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA
Sbjct: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60

Query: 61 DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97
          DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR
Sbjct: 61 DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97

[Close]

BLAST of MC11g0750.1 vs. ExPASy TrEMBL
Match: A0A6J1FNE9 (uncharacterized protein LOC111445841 OS=Cucurbita moschata OX=3662 GN=LOC111445841 PE=4 SV=1)

HSP 1 Score: 108 bits (270), Expect = 1.15e-28
Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
          MAKSKDDI YG AQAKLSEDE+LRVAYKHGTPLESGKIAD++ VDLFSSA  IS+D S  
Sbjct: 1  MAKSKDDITYGAAQAKLSEDESLRVAYKHGTPLESGKIADAETVDLFSSAQNISQDRSAG 60

Query: 61 DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97
            S++A  +  +Q RR D ++EGG   D ADP+A  R
Sbjct: 61 RSSAAATESITNQLRRGDTTSEGGTGCDTADPSAGRR 97

[Close]

BLAST of MC11g0750.1 vs. ExPASy TrEMBL
Match: A0A6J1IVM5 (uncharacterized protein LOC111480360 OS=Cucurbita maxima OX=3661 GN=LOC111480360 PE=4 SV=1)

HSP 1 Score: 107 bits (267), Expect = 2.61e-27
Identity = 63/97 (64.95%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 1   MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
           MAKSKDDI YG AQAKLSEDEALRVAYKHGTPLESGKIAD++ VDLFSSA  I +D S  
Sbjct: 75  MAKSKDDITYGAAQAKLSEDEALRVAYKHGTPLESGKIADAETVDLFSSAQNIYQDRSAG 134

Query: 61  DRSSSAAAATQSQPRREDPSNEGGRESDAADPAAAGR 97
             S++A  +  +Q RR D ++EGG   D ADP+A  R
Sbjct: 135 RSSAAATESITNQLRRGDTNSEGGTGCDTADPSAGHR 171

[Close]

BLAST of MC11g0750.1 vs. ExPASy TrEMBL
Match: A0A5A7UAD0 (Seed maturation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001470 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 9.69e-26
Identity = 68/101 (67.33%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
           MAKSKDDI YG AQAKLSEDEALRVAYKHGTPLESGKI+DSD VDLFSSA +I++D+S A
Sbjct: 1   MAKSKDDITYGAAQAKLSEDEALRVAYKHGTPLESGKISDSDTVDLFSSAHKIAQDTSGA 60

Query: 61  DRSSSAAAATQS--QPRREDPSN--EGGRESDAADPAAAGR 97
            RSS+AAA + S  Q  R   +N  E G   D ADP+A  R
Sbjct: 61  -RSSAAAAQSISSNQVHRGGDANDEEAGTGCDTADPSAGRR 100

[Close]

BLAST of MC11g0750.1 vs. ExPASy TrEMBL
Match: E5GBB4 (Seed maturation protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 9.69e-26
Identity = 68/101 (67.33%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
           MAKSKDDI YG AQAKLSEDEALRVAYKHGTPLESGKI+DSD VDLFSSA +I++D+S A
Sbjct: 1   MAKSKDDITYGAAQAKLSEDEALRVAYKHGTPLESGKISDSDTVDLFSSAHKIAQDTSGA 60

Query: 61  DRSSSAAAATQS--QPRREDPSN--EGGRESDAADPAAAGR 97
            RSS+AAA + S  Q  R   +N  E G   D ADP+A  R
Sbjct: 61  -RSSAAAAQSISSNQVHRGGDANDEEAGTGCDTADPSAGRR 100

[Close]

BLAST of MC11g0750.1 vs. TAIR 10
Match: AT3G12960.1 (unknown protein; Has 44 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 1.0e-18
Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 1  MAKSKDDIKYGVAQAKLSEDEALRVAYKHGTPLESGKIADSDPVDLFSSASRISRDSSTA 60
          MAK+KDDIKY  AQAKLSEDEA+RV+YKHGTPLE GKIA+S+PV+LFSSA RI +     
Sbjct: 1  MAKNKDDIKYATAQAKLSEDEAIRVSYKHGTPLEGGKIAESEPVELFSSAQRIEK----- 60

Query: 61 DRSSSAAAATQSQPRREDPSNEGGRESDA 90
           +  SAA+  Q+Q +R+    +G R  D+
Sbjct: 61 GKEQSAASGDQTQIQRDIKDIKGTRTDDS 84

The following BLAST results are available for this feature:

BLAST of MC11g0750.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE44	1.5e-17	58.43	SEED MATURATION PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=SMP1 PE=3 SV=1	[more]

BLAST of MC11g0750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137261.1	1.36e-54	100.00	uncharacterized protein LOC111008762 [Momordica charantia]	[more]
XP_022940123.1	2.37e-28	64.95	uncharacterized protein LOC111445841 [Cucurbita moschata]	[more]
KAG7037482.1	3.36e-28	63.92	hypothetical protein SDJN02_01109, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607969.1	8.43e-28	63.92	hypothetical protein SDJN03_01311, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023525086.1	1.94e-27	64.95	uncharacterized protein LOC111788801 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC11g0750.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C618	6.57e-55	100.00	uncharacterized protein LOC111008762 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1FNE9	1.15e-28	64.95	uncharacterized protein LOC111445841 OS=Cucurbita moschata OX=3662 GN=LOC1114458...	[more]
A0A6J1IVM5	2.61e-27	64.95	uncharacterized protein LOC111480360 OS=Cucurbita maxima OX=3661 GN=LOC111480360...	[more]
A0A5A7UAD0	9.69e-26	67.33	Seed maturation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GBB4	9.69e-26	67.33	Seed maturation protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of MC11g0750.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12960.1	1.0e-18	58.43	unknown protein; Has 44 Blast hits to 44 proteins in 14 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..77
None	No IPR available	PROSITE	PS00387	PPASE	coord: 40..46
IPR044984	SEED MATURATION PROTEIN 1	PANTHER	PTHR37732	OS08G0104400 PROTEIN	coord: 1..90

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0750	MC11g0750	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0750.1-cds	MC11g0750.1-cds-MC11:6067011..6067301	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0750.1	MC11g0750.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0010231	maintenance of seed dormancy
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0006457	protein folding
biological_process	GO:0042221	response to chemical
biological_process	GO:0009408	response to heat
cellular_component	GO:0005887	integral component of plasma membrane
molecular_function	GO:0009927	histidine phosphotransfer kinase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000155	phosphorelay sensor kinase activity
molecular_function	GO:0044183	protein folding chaperone