MC11g0712.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0712.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein HAPLESS 2 isoform X1
Location	MC11: 5732961 .. 5735852 (-)
Sequence length	1580
RNA-Seq Expression	MC11g0712.1
Synteny	MC11g0712.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGGCCGCATGCCAAAATCCTCCAAGTTTGATCCAAAACCCTCCGAACTTCTCGATCTCGTCACCAGCGCGCGCTCTGATCGACGGTTATCTTTCGAAAGTCCGGCACTGTGGAAATGAGACCCCCTCCCTTCTTCCTGCGTCTGATGTTCTTCATCAATTTGCGGTGCTCTTCAAGCATTCCAATCCAGGTTGATTGTCTCCGGAGTATTTGCTCTTTAAATTTTGATTATGTGTATGATCGTACAAATTTGATTTTACCGAACAAGTTTCTTTTGGAACTGCTGCGAGTGGAAATCTCATCTGCAAGAGAAAATTATAATGATCGATACTCAACACTGTCGTTATTTAAACCCTAACCCCTTTTTGCGATCCTCTCTTGAGTTAATATGCTTATTGTTGTCATTTTTTTCCATTTAGGTATTGATTTCTCACGTTTTCATATTATTTCGCAGGAGTTTTGGTCTTGTACGTCATTAGTTTTTAGTAAATGCCTAATCTACCCGACATAATGGGCAACGTTGCCAGTTCGGTTGCCTCAGGATTCTTTTCAGCCGTTGGCAAACTCTTTCGATCCCCACTGGATTTTCTTTCTGGAAAATCCTGCAGGTTGGTACCATTTTTCCTGTTTCTTTTGCTATTCTCTTCAAGTGGATTCTACCCATAAACTCAATGATTTTTCGGATTTTGTCATTTTCGTTGACCTAATTTTGACGTATTCTGTGCCTTTTGATTGAATATTGTTTATCTGATTTTGTCACTGCCCACATATGCTCGCAGTTCGGTGTGTGGATCAACATGGGATTTCATATGTTACATAGAAAATTTCTGCGTCGCCAATTTGCTAAAGTTGGGCATGGTCTTGATCCTCTCATTATTTGGTGAGTGAAACAGAAAAGTTTTTTTTGTGTATCTCAGTACCTTGGTATTTATAATATGTTGGGATTTGTCTGTTTCCAATGGTTGGGAGAAGCAGCCTTACAGCTTAAAGCCTCGCATATTAAGGTCCAAAGTTATCTAATAATATAACTCAATATCTTATTAAGTATCCAACTACTCTTAGTTTGGTCAGTATAGCAAGGTCACCCTCTGGATTAGATTTGATTACATTTAATGATACACCATTAACTTCCTGAAATTGCAGGCCTGCTTCTCGTATTTACAGAACCATTTCTATTGTGAACTAATTTGATTTGGTATGGAAAAATACAATTGTTTCTTCTACATTTCGAAATGTATAATTCACATCTCTTAACTTTTTAGTTAACAAAATAAAGTTTGTGGCCATCAGCCTACGATGAAATGCCAAGGTCAATAGCTTACTGGTGCAATAGTAAAATGCCAACTAAGTTGATATGGTGTGGGAAAATGTAATGTTTCCCCTACGTTTTGAAATGTATATCCATATTTGACAACTTCTAGTTATCTGAATTAAGTTTTAGGTCATCAGCTTATGGTAAAATGCCAACATGAATTGCTTGCTGATGTAATTGTAATTAGATAGGAAATACAATCCCTTAATACTGTTATTCCTGCTGTGATTCTAAGTCATGGGCTCACACGATCAAAAGAAATTTCTTAGGAAATGGATCCAAATCCAGCTTAGATGCTTCAGTTTCAAGTGATAGTGAGAAGTTCTAGATGCTTAAAACTTAGTACAAATTATATGTACATTGTCACTTGTTTAATGCATGGAACATAAGTTCAGCACTTGAATTTGCCTTTTTTTTTCCTTTCCTTTTTTGGAATCGTATGCAGTTATTTTGCTCCTGTATTTGTTACATAAAATTGGCATCTTTGGATGCATCTGTCGGGGGCTCTGCAGAATGACGTGGACATGTATAGCTTCATACTTCTATGCATGGGATTACTGCTGCACTTTCATGTGTATCAAGCTTGGCAGTGTCAAAAGAACAAGAAGACGGCGCCATAGAAGAAGAGACCTGGAAGAAGAGTTTGAAAGTGAAGGAGGAAAACACCGGTATGGGTCATCGAGCGATTCGAGTAGTGTCCCTGAACGCATTGAGTTGAGAAGTAGTCAACGGGCATCTCGTAGATGGAGGATGAACCACAGAGGTTCTCAAATGAGAAAGGCATTGAGGCCTAAGAGTCGTGGAATTCGAGTAAGAAGCGGTCGAACATTGGTCTATGGTAAGCATAGAAGAAAATCCAGTGAGGTTGTGAATCGTTTGGGTGAGATCCATAGCCTTGGAAGGCATGGATCATCTAAGTTTGTGCATGAAGAAATAAGGTACAAAAGAGGAAGGCAGAAATGATAACAAAAGTAAGTGTTTTGAAAACTTATTTTTTTCTTTCAAAAATTGACTTAGCTTTTAAAAATATTTTTAAAAAATTAATAATAAAACAAATACTAATAAGTGAAAGTAGTAGTTGTAAACCTCATTTTTACAAAAATGGAAAATAGAAAATAAAATGGTTAAATTTGGGGCTTAATTATTATTAAGGTAAAATATTATTTTGGTACATCTACTTTCTTCGTCCATTTTAATCATTTTTTTTATATCCGTGAGTGTTCGGTTGGGTCAGCTTACTAATTTCTAAGGTAGGTGATCATCATGGGATTTGAACTCATTCTCTCTTAATTACCTTAGCCCATTTGAGACTAATGAGCCACCCATGATGGTTCTTTCTATTTTAGACTTTGATATCATAGTGTGTATGTATATTGCGTTTGTTTCAATCAAACTTTATTCTATTAATTTGGCACAAAGAGTCATAATTTGTGATTCAATTGATTAGCCAAATTTTGAAGTTAGAACAAGTTTTATAACTACAATGTAATTCAATTGGTTAATACACATGTTATCAAACTTAAAGGTGGTGGGTTTAAATCATCTACCATACTTGAAAAAAACAATGAATAAATTGGT

mRNA sequence

CTTGGGCCGCATGCCAAAATCCTCCAAGTTTGATCCAAAACCCTCCGAACTTCTCGATCTCGTCACCAGCGCGCGCTCTGATCGACGGTTATCTTTCGAAAGTCCGGCACTGTGGAAATGAGACCCCCTCCCTTCTTCCTGCGTCTGATGTTCTTCATCAATTTGCGGTGCTCTTCAAGCATTCCAATCCAGGAGTTTTGGTCTTGTACGTCATTAGTTTTTAGTAAATGCCTAATCTACCCGACATAATGGGCAACGTTGCCAGTTCGGTTGCCTCAGGATTCTTTTCAGCCGTTGGCAAACTCTTTCGATCCCCACTGGATTTTCTTTCTGGAAAATCCTGCAGTTCGGTGTGTGGATCAACATGGGATTTCATATGTTACATAGAAAATTTCTGCGTCGCCAATTTGCTAAAGTTGGGCATGGTCTTGATCCTCTCATTATTTGTTATTTTGCTCCTGTATTTGTTACATAAAATTGGCATCTTTGGATGCATCTGTCGGGGGCTCTGCAGAATGACGTGGACATGTATAGCTTCATACTTCTATGCATGGGATTACTGCTGCACTTTCATGTGTATCAAGCTTGGCAGTGTCAAAAGAACAAGAAGACGGCGCCATAGAAGAAGAGACCTGGAAGAAGAGTTTGAAAGTGAAGGAGGAAAACACCGGTATGGGTCATCGAGCGATTCGAGTAGTGTCCCTGAACGCATTGAGTTGAGAAGTAGTCAACGGGCATCTCGTAGATGGAGGATGAACCACAGAGGTTCTCAAATGAGAAAGGCATTGAGGCCTAAGAGTCGTGGAATTCGAGTAAGAAGCGGTCGAACATTGGTCTATGGTAAGCATAGAAGAAAATCCAGTGAGGTTGTGAATCGTTTGGGTGAGATCCATAGCCTTGGAAGGCATGGATCATCTAAGTTTGTGCATGAAGAAATAAGGTACAAAAGAGGAAGGCAGAAATGATAACAAAAGTAAGTGTTTTGAAAACTTATTTTTTTCTTTCAAAAATTGACTTAGCTTTTAAAAATATTTTTAAAAAATTAATAATAAAACAAATACTAATAAGTGAAAGTAGTAGTTGTAAACCTCATTTTTACAAAAATGGAAAATAGAAAATAAAATGGTTAAATTTGGGGCTTAATTATTATTAAGGTAAAATATTATTTTGGTACATCTACTTTCTTCGTCCATTTTAATCATTTTTTTTATATCCGTGAGTGTTCGGTTGGGTCAGCTTACTAATTTCTAAGGTAGGTGATCATCATGGGATTTGAACTCATTCTCTCTTAATTACCTTAGCCCATTTGAGACTAATGAGCCACCCATGATGGTTCTTTCTATTTTAGACTTTGATATCATAGTGTGTATGTATATTGCGTTTGTTTCAATCAAACTTTATTCTATTAATTTGGCACAAAGAGTCATAATTTGTGATTCAATTGATTAGCCAAATTTTGAAGTTAGAACAAGTTTTATAACTACAATGTAATTCAATTGGTTAATACACATGTTATCAAACTTAAAGGTGGTGGGTTTAAATCATCTACCATACTTGAAAAAAACAATGAATAAATTGGT

Coding sequence (CDS)

ATGCCTAATCTACCCGACATAATGGGCAACGTTGCCAGTTCGGTTGCCTCAGGATTCTTTTCAGCCGTTGGCAAACTCTTTCGATCCCCACTGGATTTTCTTTCTGGAAAATCCTGCAGTTCGGTGTGTGGATCAACATGGGATTTCATATGTTACATAGAAAATTTCTGCGTCGCCAATTTGCTAAAGTTGGGCATGGTCTTGATCCTCTCATTATTTGTTATTTTGCTCCTGTATTTGTTACATAAAATTGGCATCTTTGGATGCATCTGTCGGGGGCTCTGCAGAATGACGTGGACATGTATAGCTTCATACTTCTATGCATGGGATTACTGCTGCACTTTCATGTGTATCAAGCTTGGCAGTGTCAAAAGAACAAGAAGACGGCGCCATAGAAGAAGAGACCTGGAAGAAGAGTTTGAAAGTGAAGGAGGAAAACACCGGTATGGGTCATCGAGCGATTCGAGTAGTGTCCCTGAACGCATTGAGTTGAGAAGTAGTCAACGGGCATCTCGTAGATGGAGGATGAACCACAGAGGTTCTCAAATGAGAAAGGCATTGAGGCCTAAGAGTCGTGGAATTCGAGTAAGAAGCGGTCGAACATTGGTCTATGGTAAGCATAGAAGAAAATCCAGTGAGGTTGTGAATCGTTTGGGTGAGATCCATAGCCTTGGAAGGCATGGATCATCTAAGTTTGTGCATGAAGAAATAAGGTACAAAAGAGGAAGGCAGAAATGA

Protein sequence

MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTRRRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK

Homology

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BLAST of MC11g0712.1 vs. ExPASy Swiss-Prot
Match: F4JP36 (Protein HAPLESS 2 OS=Arabidopsis thaliana OX=3702 GN=HAP2 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-04
Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 18  GFFSAV----GKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMVLILSLF 77
           GFF ++     K+    +DF++G +C + C S +DF C+I+  C++ ++  G++L L   
Sbjct: 515 GFFDSIRILWTKIINGLVDFITGDTCRNKCSSFFDFSCHIQYVCLSWMVMFGLLLALFPI 574

Query: 78  VILLLYLLHKIGIF 88
             LLL+LLH+ G+F
Sbjct: 575 TCLLLWLLHQKGLF 588

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BLAST of MC11g0712.1 vs. NCBI nr
Match: XP_022154011.1 (uncharacterized protein LOC111021352 [Momordica charantia])

HSP 1 Score: 475 bits (1222), Expect = 1.08e-168
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL 120
           LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL
Sbjct: 61  LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL 120

Query: 121 GSVKRTRRRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRG 180
           GSVKRTRRRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRG
Sbjct: 121 GSVKRTRRRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRG 180

Query: 181 SQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYK 240
           SQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYK
Sbjct: 181 SQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYK 240

Query: 241 RGRQK 245
           RGRQK
Sbjct: 241 RGRQK 245

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BLAST of MC11g0712.1 vs. NCBI nr
Match: XP_038897053.1 (uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida])

HSP 1 Score: 357 bits (916), Expect = 3.52e-122
Identity = 184/238 (77.31%), Postives = 208/238 (87.39%), Query Frame = 0


Query: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67
           MGNVASS+ SG FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCV+NLLK+GMV
Sbjct: 1   MGNVASSLTSGIFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMV 60

Query: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127
           LILS FV+L L LLHKIGIFGCI RGLC+M WTC+ASYFYAW+YCCTFMCIKL SVKRTR
Sbjct: 61  LILSYFVLLFLCLLHKIGIFGCIGRGLCKMIWTCLASYFYAWEYCCTFMCIKLASVKRTR 120

Query: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187
           RR  RRRDLEEEFESE GK ++GS+SDSS+VPE +E RSS+RA RRWR NHR S+MRK+L
Sbjct: 121 RRHLRRRDLEEEFESEEGKCQHGSTSDSSNVPEHVESRSSRRACRRWRRNHRSSRMRKSL 180

Query: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245
           RP+  GIRVRSGR LVYGKHRRKS EV N L EIHS G +GSSKFVH+E +Y+R  Q+
Sbjct: 181 RPRGHGIRVRSGRVLVYGKHRRKSVEVGNHLNEIHSFGMYGSSKFVHKERKYRRESQR 238

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BLAST of MC11g0712.1 vs. NCBI nr
Match: XP_008444189.1 (PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo] >XP_016899850.1 PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 348 bits (892), Expect = 1.59e-118
Identity = 181/238 (76.05%), Postives = 206/238 (86.55%), Query Frame = 0


Query: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANL+K+GMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60

Query: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127
            ILS FV+LLLYLLHKIGIFGCI RGLCRM WTC+ASYFYAW+YCC+FMCIKL SVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120

Query: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187
           RR  RRRDLEEEFESE GK ++ S+SDSS+V E +E RSS+ +SRRWR NH+ SQ RK+L
Sbjct: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180

Query: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245
           RPK  G+RVRSGR LVYGKHRRKS EV N   EI S G +GSSKFVH+E +Y+RGRQ+
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

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BLAST of MC11g0712.1 vs. NCBI nr
Match: XP_004142706.1 (protein HAPLESS 2 isoform X1 [Cucumis sativus] >XP_011653780.1 protein HAPLESS 2 isoform X1 [Cucumis sativus] >KGN54547.1 hypothetical protein Csa_012210 [Cucumis sativus])

HSP 1 Score: 342 bits (877), Expect = 3.04e-116
Identity = 178/236 (75.42%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANLLK+GMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLLKMGMV 60

Query: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127
            ILS FV+LLLYLLHKIGIF CI RGLCRM WTC+ASYFYAW+YCC FMCIKL SVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFRCIGRGLCRMIWTCLASYFYAWEYCCGFMCIKLASVKRTR 120

Query: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187
           RR  RRRD+EEEFE E GK R+ S+SDS++V E +E +SS+R S+RWR NHR SQ RK+L
Sbjct: 121 RRHVRRRDMEEEFEIEEGKCRHESTSDSTNVLEHVESKSSRRVSQRWRRNHRDSQRRKSL 180

Query: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGR 243
           RPK  G+RVRSGR LVYGKHRRKS EV N L EI S G +GSSK+VH+E +Y+RGR
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHLNEIDSFGMYGSSKYVHKERKYRRGR 236

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BLAST of MC11g0712.1 vs. NCBI nr
Match: KAG6608041.1 (Protein HAPLESS 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315 bits (806), Expect = 1.36e-105
Identity = 173/245 (70.61%), Postives = 192/245 (78.37%), Query Frame = 0


Query: 1   MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           M NL D MGNVASS+ASG F A+ K+F SPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL 120
           LLK+GMV+IL+ FV+LLLYL HKIGIFGCI RGLCRM WTC+ASY +AW+YCCTFMCIKL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120

Query: 121 GSVKRTRRRRHRRRDLEEEFESEG-GKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHR 180
            SVKRTRRRRHRRRDLEEE ESE   KHRYGSSSDSS+  E+IE R S+R SR+ R +HR
Sbjct: 121 ASVKRTRRRRHRRRDLEEELESEEEAKHRYGSSSDSSNDSEKIESRRSKRVSRKRRRSHR 180

Query: 181 GSQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRY 240
           GSQ  K LRP+S GIRVRSGR LVY KH                    GSSK V +E +Y
Sbjct: 181 GSQTSKTLRPRSHGIRVRSGRVLVYSKH--------------------GSSKIVQKERKY 225

Query: 241 KRGRQ 244
           +RGRQ
Sbjct: 241 RRGRQ 225

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BLAST of MC11g0712.1 vs. ExPASy TrEMBL
Match: A0A6J1DMF3 (uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021352 PE=4 SV=1)

HSP 1 Score: 475 bits (1222), Expect = 5.23e-169
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL 120
           LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL
Sbjct: 61  LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL 120

Query: 121 GSVKRTRRRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRG 180
           GSVKRTRRRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRG
Sbjct: 121 GSVKRTRRRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRG 180

Query: 181 SQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYK 240
           SQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYK
Sbjct: 181 SQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYK 240

Query: 241 RGRQK 245
           RGRQK
Sbjct: 241 RGRQK 245

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BLAST of MC11g0712.1 vs. ExPASy TrEMBL
Match: A0A1S4DVV8 (protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1)

HSP 1 Score: 348 bits (892), Expect = 7.68e-119
Identity = 181/238 (76.05%), Postives = 206/238 (86.55%), Query Frame = 0


Query: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANL+K+GMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLVKMGMV 60

Query: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127
            ILS FV+LLLYLLHKIGIFGCI RGLCRM WTC+ASYFYAW+YCC+FMCIKL SVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFGCIGRGLCRMIWTCLASYFYAWEYCCSFMCIKLASVKRTR 120

Query: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187
           RR  RRRDLEEEFESE GK ++ S+SDSS+V E +E RSS+ +SRRWR NH+ SQ RK+L
Sbjct: 121 RRHVRRRDLEEEFESEEGKCQHESTSDSSNVLEHVESRSSRWSSRRWRRNHKDSQKRKSL 180

Query: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGRQK 245
           RPK  G+RVRSGR LVYGKHRRKS EV N   EI S G +GSSKFVH+E +Y+RGRQ+
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHSNEIDSFGMYGSSKFVHKERKYRRGRQR 238

[Close]

BLAST of MC11g0712.1 vs. ExPASy TrEMBL
Match: A0A0A0L1V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1)

HSP 1 Score: 342 bits (877), Expect = 1.47e-116
Identity = 178/236 (75.42%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67
           MGNVASS+AS  FSA+GK+F SPLDFLSG+SCSSVCGSTWDFICYIENFCVANLLK+GMV
Sbjct: 1   MGNVASSLASDVFSAIGKIFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVANLLKMGMV 60

Query: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127
            ILS FV+LLLYLLHKIGIF CI RGLCRM WTC+ASYFYAW+YCC FMCIKL SVKRTR
Sbjct: 61  FILSYFVLLLLYLLHKIGIFRCIGRGLCRMIWTCLASYFYAWEYCCGFMCIKLASVKRTR 120

Query: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187
           RR  RRRD+EEEFE E GK R+ S+SDS++V E +E +SS+R S+RWR NHR SQ RK+L
Sbjct: 121 RRHVRRRDMEEEFEIEEGKCRHESTSDSTNVLEHVESKSSRRVSQRWRRNHRDSQRRKSL 180

Query: 188 RPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRYKRGR 243
           RPK  G+RVRSGR LVYGKHRRKS EV N L EI S G +GSSK+VH+E +Y+RGR
Sbjct: 181 RPKGHGVRVRSGRVLVYGKHRRKSVEVGNHLNEIDSFGMYGSSKYVHKERKYRRGR 236

[Close]

BLAST of MC11g0712.1 vs. ExPASy TrEMBL
Match: A0A6J1FIX0 (uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC111445893 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 2.33e-101
Identity = 170/245 (69.39%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 1   MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           M NL D MGNVASS+ASG F A+ K+F SPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL 120
           LLK+GMV+IL+ FV+LLLYL HKIGIFGCI RGLCRM WTC+ASY +AW+YCCTFMCIKL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGLCRMIWTCLASYCHAWEYCCTFMCIKL 120

Query: 121 GSVKRTRRRRHRRRDLEEEFESE-GGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHR 180
            SVKRTRRR HRRRDLEEE ESE   K+RYGSSSDSS+  ++IE R S+R SR+ R +HR
Sbjct: 121 ASVKRTRRR-HRRRDLEEELESEEDAKYRYGSSSDSSNDSKKIESRRSKRVSRKRRRSHR 180

Query: 181 GSQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRY 240
           GSQ  K LRP S GIRVRSGR LVY KH                    GSSK V +E  Y
Sbjct: 181 GSQTSKTLRPPSHGIRVRSGRVLVYSKH--------------------GSSKIVQKERNY 224

Query: 241 KRGRQ 244
           +RGRQ
Sbjct: 241 RRGRQ 224

[Close]

BLAST of MC11g0712.1 vs. ExPASy TrEMBL
Match: A0A6J1IVE5 (uncharacterized protein LOC111480312 OS=Cucurbita maxima OX=3661 GN=LOC111480312 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 7.92e-101
Identity = 168/246 (68.29%), Postives = 189/246 (76.83%), Query Frame = 0


Query: 1   MPNLPDIMGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60
           M NL D MGNVASS+ASG F A+ K+F SPLDFLSGKSCSSVCGSTWDFICYIENFCVAN
Sbjct: 1   MLNLSDAMGNVASSLASGLFLALNKVFGSPLDFLSGKSCSSVCGSTWDFICYIENFCVAN 60

Query: 61  LLKLGMVLILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKL 120
           LLK+GMV+IL+ FV+LLLYL HKIGIFGCI RG CRM WTC+ASY +AW+YCCTFMC+KL
Sbjct: 61  LLKMGMVVILAYFVLLLLYLFHKIGIFGCIGRGFCRMIWTCLASYCHAWEYCCTFMCVKL 120

Query: 121 GSVKRTRRRRHRRRDLEEEFESEG-GKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHR 180
            SVKRTRR  HRRRDLEEE ESE   KHRYGSS DSS+  E+IE R S+R SR+ R +HR
Sbjct: 121 ASVKRTRRC-HRRRDLEEELESEEEAKHRYGSSCDSSNDSEKIESRRSERVSRKRRRSHR 180

Query: 181 GSQMRKALRPKSRGIRVRSGRTLVYGKHRRKSSEVVNRLGEIHSLGRHGSSKFVHEEIRY 240
           GSQ  K LRP S GIRVRSGR LVY KH                    GSSKFV ++ +Y
Sbjct: 181 GSQTSKTLRPTSHGIRVRSGRVLVYSKH--------------------GSSKFVQKKRKY 225

Query: 241 KRGRQK 245
           +RGRQ+
Sbjct: 241 RRGRQR 225

[Close]

BLAST of MC11g0712.1 vs. TAIR 10
Match: AT1G21722.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78922.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 146.0 bits (367), Expect = 4.0e-35
Identity = 93/230 (40.43%), Postives = 130/230 (56.52%), Query Frame = 0


Query: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67
           MGNV  S  +GF  ++G  F SPLDFLSGKSCSSVC S WDFICY+ENFCVANL K  ++
Sbjct: 1   MGNVMDSFFTGFSHSIGNFFGSPLDFLSGKSCSSVCPSPWDFICYVENFCVANLAKTALI 60

Query: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127
           LILS F +  +Y+L+K+G + CI  G  ++ W  ++ +FY   YCC+F C  L   KR R
Sbjct: 61  LILSYFFLFFIYMLYKVGFWHCIIHGFFKLLWVLVSCWFYMLGYCCSFFCYDLLHSKRRR 120

Query: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSSVPERIELRSSQRASRRWRMNHRGSQMRKAL 187
           RRRH R  +EE+++            D+S   + ++   S    R  R   +  ++RK+L
Sbjct: 121 RRRHNRY-IEEDYD------------DNSDDDDDVDDDGSFTYHRSKRECRKEERLRKSL 180

Query: 188 RPKSRGIRVRSGRTLVYGKHRRKS--SEVVNRLGEIHSLGRHGSSKFVHE 236
           RP++  +RV      V   HR  S  S+  +    IH +     SKF  +
Sbjct: 181 RPRNHRVRVG-----VRKDHRSDSGLSQHADGGSPIHGVRVSRESKFARK 212

[Close]

BLAST of MC11g0712.1 vs. TAIR 10
Match: AT1G78922.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16
Identity = 67/210 (31.90%), Postives = 107/210 (50.95%), Query Frame = 0


Query: 8   MGNVASSVASGFFSAVGKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMV 67
           MGN     ++     +G +F +PL    G+SC  VC   WD  C+IE+FC+ ++ KL ++
Sbjct: 1   MGNAIGKASNDIGGFIGNIFTAPLKATLGRSCLDVCSGPWDLECFIEHFCLPDIAKLVLM 60

Query: 68  LILSLFVILLLYLLHKIGIFGCICRGLCRMTWTCIASYFYAWDYCCTFMCIKLGSVKRTR 127
             L   +++ + LL K+GI  C+ + +C+M+    A+Y++      + +C  L ++ R  
Sbjct: 61  SSLCFIILMFITLLFKLGICQCVVKSICKMSCAACAAYWFDIGEMISCLCHSLTNINRVN 120

Query: 128 RRRHRRRDLEEEFESEGGKHRYGSSSDSSS--VPERIE-LRSSQRASR---RWRMNHRGS 187
           RRR R  D+      E   + Y S  +SSS   P RI+ +R  QR  R   +   +H GS
Sbjct: 121 RRRKRLDDI------EATTYDYPSDDESSSSDSPSRIDNIRPKQRRRRLGSKHSHHHHGS 180

Query: 188 QM--RKALRPKSRGIRVRSGRTLVYGKHRR 210
               R+ +R  SR + VR G     GK RR
Sbjct: 181 NRNNRRLIRLPSRQLSVRVG-----GKSRR 199

[Close]

BLAST of MC11g0712.1 vs. TAIR 10
Match: AT4G11720.1 (hapless 2 )

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-05
Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 18  GFFSAV----GKLFRSPLDFLSGKSCSSVCGSTWDFICYIENFCVANLLKLGMVLILSLF 77
           GFF ++     K+    +DF++G +C + C S +DF C+I+  C++ ++  G++L L   
Sbjct: 515 GFFDSIRILWTKIINGLVDFITGDTCRNKCSSFFDFSCHIQYVCLSWMVMFGLLLALFPI 574

Query: 78  VILLLYLLHKIGIF 88
             LLL+LLH+ G+F
Sbjct: 575 TCLLLWLLHQKGLF 588

The following BLAST results are available for this feature:

BLAST of MC11g0712.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JP36	2.1e-04	35.14	Protein HAPLESS 2 OS=Arabidopsis thaliana OX=3702 GN=HAP2 PE=1 SV=1	[more]

BLAST of MC11g0712.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154011.1	1.08e-168	100.00	uncharacterized protein LOC111021352 [Momordica charantia]	[more]
XP_038897053.1	3.52e-122	77.31	uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida]	[more]
XP_008444189.1	1.59e-118	76.05	PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo] >XP_016899850.1 PREDICTED...	[more]
XP_004142706.1	3.04e-116	75.42	protein HAPLESS 2 isoform X1 [Cucumis sativus] >XP_011653780.1 protein HAPLESS 2...	[more]
KAG6608041.1	1.36e-105	70.61	Protein HAPLESS 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MC11g0712.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMF3	5.23e-169	100.00	uncharacterized protein LOC111021352 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A1S4DVV8	7.68e-119	76.05	protein HAPLESS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487604 PE=4 SV=1	[more]
A0A0A0L1V0	1.47e-116	75.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361810 PE=4 SV=1	[more]
A0A6J1FIX0	2.33e-101	69.39	uncharacterized protein LOC111445893 OS=Cucurbita moschata OX=3662 GN=LOC1114458...	[more]
A0A6J1IVE5	7.92e-101	68.29	uncharacterized protein LOC111480312 OS=Cucurbita maxima OX=3661 GN=LOC111480312...	[more]

BLAST of MC11g0712.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21722.1	4.0e-35	40.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G78922.1	1.1e-16	31.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G11720.1	1.5e-05	35.14	hapless 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..182
None	No IPR available	PANTHER	PTHR35278	TRANSMEMBRANE PROTEIN-RELATED	coord: 8..241
None	No IPR available	PANTHER	PTHR35278:SF1	F8K7.16	coord: 8..241

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0712	MC11g0712	gene

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0712.1-utr3	MC11g0712.1-utr3-MC11:5732961..5733575	utr3

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0712.1-cds	MC11g0712.1-cds-MC11:5733576..5734093	CDS
MC11g0712.1-cds	MC11g0712.1-cds-MC11:5734971..5735071	CDS
MC11g0712.1-cds	MC11g0712.1-cds-MC11:5735243..5735361	CDS

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0712.1-utr5	MC11g0712.1-utr5-MC11:5735362..5735396	utr5
MC11g0712.1-utr5	MC11g0712.1-utr5-MC11:5735661..5735852	utr5

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0712.1	MC11g0712.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane