MC11g0674.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0674.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ARID domain-containing protein
Location	MC11: 5380488 .. 5381429 (+)
Sequence length	942
RNA-Seq Expression	MC11g0674.1
Synteny	MC11g0674.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAG

mRNA sequence

GCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAG

Coding sequence (CDS)

GCTAAAGCGATCCATTCGGCGGATTTGTTGGTGTGTTTTCCTTCTCGATCGAATCTGACTTTAATGCCGAAGCCGCTTTGTAGTCCAGCGAGGGGATTGGATTCCAACAAGCTCCGCCGCAGCCACCGCCACCACCATCGCCGGAGGAAATCGACCTCCGCCGCCAGTCCGCTGATATGGGCGAAACCCAAGACAATGGGGTCCGAGATATCGGAGCCGTCGTCCCCGAAAGTGACGTGTGCTGGGCAGATAAAGATCAGGCCCAAGACCGGCTCCTGCAAGAGCTGGCAATCGGTGATGGAAGAGATTGAGAGAATTCACAACAGGAGGAAATTACGGAGGAGGAGGTCTAATTGGGTCGAGTCTTTGGGGTTCAAGAAAGATATAATGCAATTCTTGACGTGTTTACGGAACATCCGGTTTGATTTTCGGTGTTTCAAAGCTTTCCCAGAAGCAGATTTCACTACGGAAGAAGAAGATGAAGAGGAGGAGGAAGAAGAGGAGGGAAAATCTCAGGAAAATCAAGTGGGAGTTGAGGGAAATGAAAGCTCCAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAGTGGGGCTAGTAATGGGATTTGCAGAGAAAGCAATGGCCCGCCATTGGCACCTCCCAAGAATGCTCTTTTGCTAATGCGATGCAGGTCTGCTCCAGCAAAGAGTTGGCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGAAGAAGATGAAAAGGAAGTGAAGGTGAAGAAGAGCTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTATGGAAATGGGGCCTGATTTCTGCAGAATGTCATCGGAGATTGCAAAGGAGACATGGGTTGGCAGGGATTTGTTTTCAAGGAGTCGGAGTTGGAAG

Protein sequence

AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEGNESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKETWVGRDLFSRSRSWK

Homology

[Close]

BLAST of MC11g0674.1 vs. NCBI nr
Match: XP_022147766.1 (uncharacterized protein LOC111016595 [Momordica charantia])

HSP 1 Score: 595 bits (1533), Expect = 1.13e-213
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 60
           AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW
Sbjct: 7   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 66

Query: 61  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 120
           AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV
Sbjct: 67  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 126

Query: 121 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 180
           ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG
Sbjct: 127 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 186

Query: 181 NESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEE 240
           NESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEE
Sbjct: 187 NESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEE 246

Query: 241 EEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKET 300
           EEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKET
Sbjct: 247 EEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKET 306

Query: 301 WVGRDLFSRSRSWK 314
           WVGRDLFSRSRSWK
Sbjct: 307 WVGRDLFSRSRSWK 320

[Close]

BLAST of MC11g0674.1 vs. NCBI nr
Match: XP_038898663.1 (transcription initiation factor IIE subunit alpha [Benincasa hispida])

HSP 1 Score: 427 bits (1098), Expect = 1.89e-147
Identity = 246/327 (75.23%), Postives = 269/327 (82.26%), Query Frame = 0


Query: 2   KAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWA 61
           K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R SHRH+HRRRKS  A SP++WA
Sbjct: 8   KGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLSHRHYHRRRKS--AESPVVWA 67

Query: 62  KPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWVE 121
           K KTMGSEISEPSSPKVTCAGQIKIRPK    KSWQSVMEEIERIHNRRKLRRRR +WVE
Sbjct: 68  KAKTMGSEISEPSSPKVTCAGQIKIRPKNS--KSWQSVMEEIERIHNRRKLRRRRFHWVE 127

Query: 122 SLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEGN 181
           SLGFKKDIMQFLTCLRNIRFDFRCF+AFP  DFTTEEE+EEEEEEEE KSQ NQVGV+ N
Sbjct: 128 SLGFKKDIMQFLTCLRNIRFDFRCFRAFPATDFTTEEEEEEEEEEEE-KSQGNQVGVDEN 187

Query: 182 ESSRTAFSKWFMVLQESGASNGICRESN----------GPPLAPPKNALLLMRCRSAPAK 241
           ESSRTAFSKWFMVLQE+G SN + RES              +APPKNALLLMRCRSAPAK
Sbjct: 188 ESSRTAFSKWFMVLQENG-SNELKRESKILCSDDDVSIEAAMAPPKNALLLMRCRSAPAK 247

Query: 242 SWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCR 301
            W EEE EEEE+++++++E+EE         VKVKKSLKWLMEEENRERLVME G DFCR
Sbjct: 248 RWLEEESEEEEDDDDDDDEKEE---------VKVKKSLKWLMEEENRERLVMETGTDFCR 307

Query: 302 MSSEIAKETWV----GRDLFSRSRSWK 314
           M+S+IAKETWV     RDLF+RS SWK
Sbjct: 308 MTSDIAKETWVVSEKSRDLFTRSHSWK 319

[Close]

BLAST of MC11g0674.1 vs. NCBI nr
Match: XP_004142611.2 (transcription initiation factor IIE subunit alpha [Cucumis sativus] >KAE8649637.1 hypothetical protein Csa_012410 [Cucumis sativus])

HSP 1 Score: 397 bits (1021), Expect = 9.62e-136
Identity = 228/324 (70.37%), Postives = 262/324 (80.86%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 60
           +K I S+DLLVCFPSRS+L LMP PLCSPARG DS+K R  +R +HRRRKS  A SP++W
Sbjct: 18  SKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRKS--AESPVVW 77

Query: 61  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 120
           AK KTMGSEISEPSSPKVTCAGQIKIRPK    KSWQSVMEEIERIHNRRKLRRRR NW+
Sbjct: 78  AKAKTMGSEISEPSSPKVTCAGQIKIRPKNS--KSWQSVMEEIERIHNRRKLRRRRFNWI 137

Query: 121 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 180
           ES GFKKDIMQFLTCLR +RFDFRCF+AFPE DFTTEEE+EEEEEEEE + ++NQVG+E 
Sbjct: 138 ESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEE-EEEKNQVGIEE 197

Query: 181 NESSRTAFSKWFMVLQESGASNGICRESNG----------PPLAPPKNALLLMRCRSAPA 240
           NESSRTAFSKWFMVLQE+G SN + R+SN             +APP+NALLLMRC+SAPA
Sbjct: 198 NESSRTAFSKWFMVLQENG-SNELKRDSNSRCYEDDESIEATMAPPRNALLLMRCKSAPA 257

Query: 241 KSWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFC 300
           + W EEE EEE++E+E+E+E+E+         VKVKKSLKWLMEEENRER+VMEMG DFC
Sbjct: 258 RRWMEEESEEEDDEKEKEKEKEK---------VKVKKSLKWLMEEENRERVVMEMGTDFC 317

Query: 301 RMSSEIAKETWVGRDLFSRSRSWK 314
           RM S+ AKE       F+RS+SWK
Sbjct: 318 RMISDNAKE-------FTRSQSWK 319

[Close]

BLAST of MC11g0674.1 vs. NCBI nr
Match: XP_008444111.1 (PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo] >KAA0064246.1 transcription initiation factor IIE subunit alpha-like [Cucumis melo var. makuwa] >TYK18616.1 transcription initiation factor IIE subunit alpha-like [Cucumis melo var. makuwa])

HSP 1 Score: 392 bits (1007), Expect = 8.79e-134
Identity = 224/323 (69.35%), Postives = 250/323 (77.40%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 60
           +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRKS  A SP++W
Sbjct: 15  SKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKS--AESPVVW 74

Query: 61  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 120
           AK KTMGSEISEPSSPKVTCAGQIKIRPK    KSWQSVMEEIERIHNRRKLRRRR  WV
Sbjct: 75  AKAKTMGSEISEPSSPKVTCAGQIKIRPKNS--KSWQSVMEEIERIHNRRKLRRRRFRWV 134

Query: 121 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 180
           ES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+ K   NQVG+E 
Sbjct: 135 ESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEK---NQVGIEE 194

Query: 181 NESSRTAFSKWFMVLQESGA------SNGICRESNGPP---LAPPKNALLLMRCRSAPAK 240
           NESSRTAFSKWFMVLQE+G+      S  +C E +      +APP NALLLMRCRSAPA+
Sbjct: 195 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 254

Query: 241 SWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCR 300
            W EEE EE                ++++++VKVKKSLKWLMEEENRERLV+EMG DFCR
Sbjct: 255 RWMEEESEE---------------GDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCR 308

Query: 301 MSSEIAKETWVGRDLFSRSRSWK 314
           M+S+ AKE       F+RS+SWK
Sbjct: 315 MTSDNAKE-------FTRSQSWK 308

[Close]

BLAST of MC11g0674.1 vs. NCBI nr
Match: XP_018812021.1 (uncharacterized protein LOC108984494 [Juglans regia] >KAF5456186.1 hypothetical protein F2P56_025693 [Juglans regia])

HSP 1 Score: 353 bits (905), Expect = 7.10e-118
Identity = 215/342 (62.87%), Postives = 252/342 (73.68%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHR---RRKSTSA--- 60
           AKA  SADLLVCFPSR++LTLMPKP+CSPAR  + NK   SH HHH    ++ ST     
Sbjct: 6   AKAAPSADLLVCFPSRAHLTLMPKPICSPARHSEPNKRHHSHHHHHHHHLKKASTRGGGQ 65

Query: 61  ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
           ASPL+WAK K MGSEISEP+SPKVTCAGQIK+RPKT SCKSWQSVMEEIERIHN RK  +
Sbjct: 66  ASPLLWAKTKPMGSEISEPTSPKVTCAGQIKVRPKTSSCKSWQSVMEEIERIHNNRK-HK 125

Query: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN 180
           +R +WVE+LG KKDIMQFLTCLR+IRFDFRCF +FPE+D TTE+ED+EEE    G+ Q+N
Sbjct: 126 KRPSWVEALGLKKDIMQFLTCLRSIRFDFRCFGSFPESDITTEDEDDEEEI---GECQDN 185

Query: 181 QVGVE---GNESSRTAFSKWFMVLQESGASNGICR------------ESNGPPLAPPKNA 240
            +G E   GNE+SRTAFSKWFMVLQE+  +N +C+            ES     APP NA
Sbjct: 186 HLGTERSDGNETSRTAFSKWFMVLQEN-QNNKLCKQEKRETKKTYDDESIAASAAPPPNA 245

Query: 241 LLLMRCRSAPAKSWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRE 300
           LLLMRCRSAPAK W  E+E+EEEE EE+E+EE         KEV+  KSLK LMEEE R 
Sbjct: 246 LLLMRCRSAPAKGWLVEKEDEEEEGEEDEDEEGTG------KEVRKAKSLKCLMEEEKRT 305

Query: 301 R----LVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 314
           +    +VM+   DF ++SS+IAKETWVG   RD FSRSRSWK
Sbjct: 306 KKENMVVMKYDTDFYKISSDIAKETWVGGGMRDPFSRSRSWK 336

[Close]

BLAST of MC11g0674.1 vs. ExPASy TrEMBL
Match: A0A6J1D3C2 (uncharacterized protein LOC111016595 OS=Momordica charantia OX=3673 GN=LOC111016595 PE=4 SV=1)

HSP 1 Score: 595 bits (1533), Expect = 5.49e-214
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 60
           AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW
Sbjct: 7   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 66

Query: 61  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 120
           AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV
Sbjct: 67  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 126

Query: 121 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 180
           ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG
Sbjct: 127 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 186

Query: 181 NESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEE 240
           NESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEE
Sbjct: 187 NESSRTAFSKWFMVLQESGASNGICRESNGPPLAPPKNALLLMRCRSAPAKSWQEEEEEE 246

Query: 241 EEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKET 300
           EEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKET
Sbjct: 247 EEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCRMSSEIAKET 306

Query: 301 WVGRDLFSRSRSWK 314
           WVGRDLFSRSRSWK
Sbjct: 307 WVGRDLFSRSRSWK 320

[Close]

BLAST of MC11g0674.1 vs. ExPASy TrEMBL
Match: A0A0A0L1Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 3.28e-136
Identity = 228/324 (70.37%), Postives = 262/324 (80.86%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 60
           +K I S+DLLVCFPSRS+L LMP PLCSPARG DS+K R  +R +HRRRKS  A SP++W
Sbjct: 8   SKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRKS--AESPVVW 67

Query: 61  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 120
           AK KTMGSEISEPSSPKVTCAGQIKIRPK    KSWQSVMEEIERIHNRRKLRRRR NW+
Sbjct: 68  AKAKTMGSEISEPSSPKVTCAGQIKIRPKNS--KSWQSVMEEIERIHNRRKLRRRRFNWI 127

Query: 121 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 180
           ES GFKKDIMQFLTCLR +RFDFRCF+AFPE DFTTEEE+EEEEEEEE + ++NQVG+E 
Sbjct: 128 ESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEE-EEEKNQVGIEE 187

Query: 181 NESSRTAFSKWFMVLQESGASNGICRESNG----------PPLAPPKNALLLMRCRSAPA 240
           NESSRTAFSKWFMVLQE+G SN + R+SN             +APP+NALLLMRC+SAPA
Sbjct: 188 NESSRTAFSKWFMVLQENG-SNELKRDSNSRCYEDDESIEATMAPPRNALLLMRCKSAPA 247

Query: 241 KSWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFC 300
           + W EEE EEE++E+E+E+E+E+         VKVKKSLKWLMEEENRER+VMEMG DFC
Sbjct: 248 RRWMEEESEEEDDEKEKEKEKEK---------VKVKKSLKWLMEEENRERVVMEMGTDFC 307

Query: 301 RMSSEIAKETWVGRDLFSRSRSWK 314
           RM S+ AKE       F+RS+SWK
Sbjct: 308 RMISDNAKE-------FTRSQSWK 309

[Close]

BLAST of MC11g0674.1 vs. ExPASy TrEMBL
Match: A0A5D3D503 (Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001490 PE=4 SV=1)

HSP 1 Score: 392 bits (1007), Expect = 4.26e-134
Identity = 224/323 (69.35%), Postives = 250/323 (77.40%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 60
           +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRKS  A SP++W
Sbjct: 15  SKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKS--AESPVVW 74

Query: 61  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 120
           AK KTMGSEISEPSSPKVTCAGQIKIRPK    KSWQSVMEEIERIHNRRKLRRRR  WV
Sbjct: 75  AKAKTMGSEISEPSSPKVTCAGQIKIRPKNS--KSWQSVMEEIERIHNRRKLRRRRFRWV 134

Query: 121 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 180
           ES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+ K   NQVG+E 
Sbjct: 135 ESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEK---NQVGIEE 194

Query: 181 NESSRTAFSKWFMVLQESGA------SNGICRESNGPP---LAPPKNALLLMRCRSAPAK 240
           NESSRTAFSKWFMVLQE+G+      S  +C E +      +APP NALLLMRCRSAPA+
Sbjct: 195 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 254

Query: 241 SWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCR 300
            W EEE EE                ++++++VKVKKSLKWLMEEENRERLV+EMG DFCR
Sbjct: 255 RWMEEESEE---------------GDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCR 308

Query: 301 MSSEIAKETWVGRDLFSRSRSWK 314
           M+S+ AKE       F+RS+SWK
Sbjct: 315 MTSDNAKE-------FTRSQSWK 308

[Close]

BLAST of MC11g0674.1 vs. ExPASy TrEMBL
Match: A0A1S3B949 (uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=4 SV=1)

HSP 1 Score: 392 bits (1007), Expect = 4.26e-134
Identity = 224/323 (69.35%), Postives = 250/323 (77.40%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIW 60
           +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRKS  A SP++W
Sbjct: 15  SKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKS--AESPVVW 74

Query: 61  AKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWV 120
           AK KTMGSEISEPSSPKVTCAGQIKIRPK    KSWQSVMEEIERIHNRRKLRRRR  WV
Sbjct: 75  AKAKTMGSEISEPSSPKVTCAGQIKIRPKNS--KSWQSVMEEIERIHNRRKLRRRRFRWV 134

Query: 121 ESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEG 180
           ES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+ K   NQVG+E 
Sbjct: 135 ESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEK---NQVGIEE 194

Query: 181 NESSRTAFSKWFMVLQESGA------SNGICRESNGPP---LAPPKNALLLMRCRSAPAK 240
           NESSRTAFSKWFMVLQE+G+      S  +C E +      +APP NALLLMRCRSAPA+
Sbjct: 195 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 254

Query: 241 SWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVMEMGPDFCR 300
            W EEE EE                ++++++VKVKKSLKWLMEEENRERLV+EMG DFCR
Sbjct: 255 RWMEEESEE---------------GDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCR 308

Query: 301 MSSEIAKETWVGRDLFSRSRSWK 314
           M+S+ AKE       F+RS+SWK
Sbjct: 315 MTSDNAKE-------FTRSQSWK 308

[Close]

BLAST of MC11g0674.1 vs. ExPASy TrEMBL
Match: A0A2I4DXY3 (uncharacterized protein LOC108984494 OS=Juglans regia OX=51240 GN=LOC108984494 PE=4 SV=1)

HSP 1 Score: 353 bits (905), Expect = 3.44e-118
Identity = 215/342 (62.87%), Postives = 252/342 (73.68%), Query Frame = 0


Query: 1   AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHR---RRKSTSA--- 60
           AKA  SADLLVCFPSR++LTLMPKP+CSPAR  + NK   SH HHH    ++ ST     
Sbjct: 6   AKAAPSADLLVCFPSRAHLTLMPKPICSPARHSEPNKRHHSHHHHHHHHLKKASTRGGGQ 65

Query: 61  ASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLRR 120
           ASPL+WAK K MGSEISEP+SPKVTCAGQIK+RPKT SCKSWQSVMEEIERIHN RK  +
Sbjct: 66  ASPLLWAKTKPMGSEISEPTSPKVTCAGQIKVRPKTSSCKSWQSVMEEIERIHNNRK-HK 125

Query: 121 RRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQEN 180
           +R +WVE+LG KKDIMQFLTCLR+IRFDFRCF +FPE+D TTE+ED+EEE    G+ Q+N
Sbjct: 126 KRPSWVEALGLKKDIMQFLTCLRSIRFDFRCFGSFPESDITTEDEDDEEEI---GECQDN 185

Query: 181 QVGVE---GNESSRTAFSKWFMVLQESGASNGICR------------ESNGPPLAPPKNA 240
            +G E   GNE+SRTAFSKWFMVLQE+  +N +C+            ES     APP NA
Sbjct: 186 HLGTERSDGNETSRTAFSKWFMVLQEN-QNNKLCKQEKRETKKTYDDESIAASAAPPPNA 245

Query: 241 LLLMRCRSAPAKSWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRE 300
           LLLMRCRSAPAK W  E+E+EEEE EE+E+EE         KEV+  KSLK LMEEE R 
Sbjct: 246 LLLMRCRSAPAKGWLVEKEDEEEEGEEDEDEEGTG------KEVRKAKSLKCLMEEEKRT 305

Query: 301 R----LVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 314
           +    +VM+   DF ++SS+IAKETWVG   RD FSRSRSWK
Sbjct: 306 KKENMVVMKYDTDFYKISSDIAKETWVGGGMRDPFSRSRSWK 336

[Close]

BLAST of MC11g0674.1 vs. TAIR 10
Match: AT1G78110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). )

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-67
Identity = 173/339 (51.03%), Postives = 221/339 (65.19%), Query Frame = 0


Query: 5   HSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSA-------ASP 64
           +SADLLVCFPSR++L L PKP+CSP+R  DS+  RR    HHRR+ S  +        SP
Sbjct: 16  YSADLLVCFPSRTHLALTPKPICSPSRPSDSSTNRRP---HHRRQLSKLSGGGGGGHGSP 75

Query: 65  LIWAK---PKTM-GSEISEPSSPKVTCAGQIKIRPKT--GSCKSWQSVMEEIERIHNRRK 124
           ++WAK    K M G EI+EP+SPKVTCAGQIK+RP    G  K+WQSVMEEIERIH+ R 
Sbjct: 76  VLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHDNRS 135

Query: 125 LRRRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKS 184
             +         G KKD+M FLTCLRNI+FDFRCF  F  AD T+++++EE+++++E   
Sbjct: 136 QSK-------FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEEDDDDDE--- 195

Query: 185 QENQVGVEGNESSRTAFSKWFMVLQE------SGASNGICRE------SNGPPLAPPKNA 244
           +E  V  E  E+S+T FSKWFMVLQE         +N  C E      +   P  PP NA
Sbjct: 196 EEEVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLEDTETEPAVPPPNA 255

Query: 245 LLLMRCRSAPAKSWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKV-KKSLKWLMEEENR 304
           LLLMRCRSAPAKSW EE  + + E+E+ EE++EE   E+ E  +K  KK L+ LMEEE  
Sbjct: 256 LLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKTKKKDLRSLMEEEKM 315

Query: 305 ERLVMEMGPDFCRMSSEIAKETWVG---RDLFSRSRSWK 315
           E ++M    +F R+SS+IAKETWV    +D  SRSRSWK
Sbjct: 316 ELVLMRYDTEFYRLSSDIAKETWVVGGIQDPLSRSRSWK 341

[Close]

BLAST of MC11g0674.1 vs. TAIR 10
Match: AT1G22230.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78110.1); Has 2358 Blast hits to 1759 proteins in 159 species: Archae - 2; Bacteria - 36; Metazoa - 1046; Fungi - 203; Plants - 157; Viruses - 72; Other Eukaryotes - 842 (source: NCBI BLink). )

HSP 1 Score: 191.8 bits (486), Expect = 8.2e-49
Identity = 146/323 (45.20%), Postives = 200/323 (61.92%), Query Frame = 0


Query: 5   HSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTSAASPLIWAKPK 64
           +SADL+VCFPSR++L+L  K + SP+   +    RR +  HHRR  S  ++S     + +
Sbjct: 12  YSADLMVCFPSRAHLSLPSKSISSPSSSFN----RRQNAPHHRRSISKLSSSGGGVRQNR 71

Query: 65  TMGSE-ISEPSSPKVTCAGQIKIR--PKTGSCKSWQSVMEEIERIHNRRKLRRRRSNWVE 124
             G E + EP+SPKVTCAGQIK+R   + G  K+WQS+M EIE+IH       R  +  +
Sbjct: 72  GGGREVVEEPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIH-------RSKSESK 131

Query: 125 SLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQENQVGVEGN 184
             G K+D+M FLTCLR+  FDFRCF AFP  D  +++E+E+EEEEEE + ++       +
Sbjct: 132 FFGIKRDVMGFLTCLRD--FDFRCFGAFPPVDIISDDEEEDEEEEEEDEEEDE------D 191

Query: 185 ESSRTAFSKWFMVLQESGASNGICRE------SNGPPLAPPKNALLLMRCRSAPAKSWQE 244
           ESS T FSKW MVL E   +N  C +      S+     PP NALLLMRCRSAP K+W E
Sbjct: 192 ESSGTVFSKWLMVLHEK-QNNEECVDGKENVFSDVETAVPPPNALLLMRCRSAPVKNWSE 251

Query: 245 EEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERL-VMEMGPDFCRMSS 304
           E++EE EE +   ++  E   EE++  V  KK L+ LMEEE +  L VM    ++ ++S+
Sbjct: 252 EKKEETEEGDNRVKQSGE-EEEEEKDRVGNKKDLRSLMEEEKKMNLVVMNYDTNYYKLSN 311

Query: 305 EIAKETWVG---RDLFSRSRSWK 315
           +IAKETWV    +D   RSRSWK
Sbjct: 312 DIAKETWVVGGIQDPLFRSRSWK 313

The following BLAST results are available for this feature:

BLAST of MC11g0674.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0674.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147766.1	1.13e-213	100.00	uncharacterized protein LOC111016595 [Momordica charantia]	[more]
XP_038898663.1	1.89e-147	75.23	transcription initiation factor IIE subunit alpha [Benincasa hispida]	[more]
XP_004142611.2	9.62e-136	70.37	transcription initiation factor IIE subunit alpha [Cucumis sativus] >KAE8649637....	[more]
XP_008444111.1	8.79e-134	69.35	PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo] >KAA0064246.1 tra...	[more]
XP_018812021.1	7.10e-118	62.87	uncharacterized protein LOC108984494 [Juglans regia] >KAF5456186.1 hypothetical ...	[more]

BLAST of MC11g0674.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3C2	5.49e-214	100.00	uncharacterized protein LOC111016595 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A0A0L1Z4	3.28e-136	70.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1	[more]
A0A5D3D503	4.26e-134	69.35	Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. maku...	[more]
A0A1S3B949	4.26e-134	69.35	uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=...	[more]
A0A2I4DXY3	3.44e-118	62.87	uncharacterized protein LOC108984494 OS=Juglans regia OX=51240 GN=LOC108984494 P...	[more]

BLAST of MC11g0674.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78110.1	3.9e-67	51.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G22230.1	8.2e-49	45.20	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 230..267
None	No IPR available	COILS	Coil	Coil	coord: 155..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..52
None	No IPR available	PANTHER	PTHR33448:SF3	OS09G0370000 PROTEIN	coord: 4..314
None	No IPR available	PANTHER	PTHR33448	CHLOROPLAST PROTEIN HCF243-RELATED	coord: 4..314

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0674	MC11g0674	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0674.1-cds	MC11g0674.1-cds-MC11:5380488..5381429	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0674.1	MC11g0674.1-protein	polypeptide