MC11g0589.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0589.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pentatricopeptide repeat-containing protein
Location	MC11: 4612045 .. 4612980 (+)
Sequence length	936
RNA-Seq Expression	MC11g0589.1
Synteny	MC11g0589.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATACATGCATTTTCAACATCTTAGTTAAACACCATTGCAGAAATGGAGATCTTCAAGCTGCTTTTGAAGTTGTGAAGGAAATGAAAAGTGCTACTAAAGTCTCTTATCCTAATCTAATCACCTACTCAACTCTGATCGGCGGCCTCTGCAAAAATGGAAAACTTAAAGAAGCCATTGAACTTTTTGAGGAGATGGTTTCAAAGGACAAGATTTTGCCTGATGCCTTAACTTACAATATTCTGATCAATGGTTTTTGTCAAGGAGGGAAAGTTGACCGTGCAAGGACAATAATAGAGTTCATGAAAAGCAATGGATGCAGTCCTAATTTATTCAATTACTCAGTCTTAATGAACGGCTTCTGTAAGGAGGGAAGACTGCAAGAGGCCAAGGAAGTTTTCGACGAAATGAAGCGGCTCGGGATGAGGCCCGACACAGTCAGCTACACTACTCTAATCAACTGCCTCTGTAGAACCGGAAGGGTTGACGAGGCAACAGAGTTACTCCAGCAGATGAAGGAAAAAGATTGCCGAGCCGATACCGTAACATTGAACGTGATGCTCGGAGGGCTATGCCGAGAAGGTAGGCTCGAGGAGGCTCTCGATATGGTGCAGAAACTCCCTTATGAGGGGTTCTATCTGAACAAAGCTAGCTACAGGATTGTGTTGAATTTCCTGACTGAAAAAGGAGAATTGAAGAGGGCCAGTGAGTTGTTGGGTCTGATGTTGAATAGGGGGTTTGTTCCTCACTATGCAACTTCAAATAATTTGCTGGTTCTTCTTTACAATGGTGGGATGGTGAATGATGCAGTAGAATCTTTGTTTGGGTTGTTAAAAATGGGGTTCAGACCTGAGCCTGAGTCTTGGTTTAATTTGGTGGATTTGATCTGCAGGGGGAGAAAACTTTTGCCTGCGTTTGAATTGCTTGATGAGTTG

mRNA sequence

CCAAATACATGCATTTTCAACATCTTAGTTAAACACCATTGCAGAAATGGAGATCTTCAAGCTGCTTTTGAAGTTGTGAAGGAAATGAAAAGTGCTACTAAAGTCTCTTATCCTAATCTAATCACCTACTCAACTCTGATCGGCGGCCTCTGCAAAAATGGAAAACTTAAAGAAGCCATTGAACTTTTTGAGGAGATGGTTTCAAAGGACAAGATTTTGCCTGATGCCTTAACTTACAATATTCTGATCAATGGTTTTTGTCAAGGAGGGAAAGTTGACCGTGCAAGGACAATAATAGAGTTCATGAAAAGCAATGGATGCAGTCCTAATTTATTCAATTACTCAGTCTTAATGAACGGCTTCTGTAAGGAGGGAAGACTGCAAGAGGCCAAGGAAGTTTTCGACGAAATGAAGCGGCTCGGGATGAGGCCCGACACAGTCAGCTACACTACTCTAATCAACTGCCTCTGTAGAACCGGAAGGGTTGACGAGGCAACAGAGTTACTCCAGCAGATGAAGGAAAAAGATTGCCGAGCCGATACCGTAACATTGAACGTGATGCTCGGAGGGCTATGCCGAGAAGGTAGGCTCGAGGAGGCTCTCGATATGGTGCAGAAACTCCCTTATGAGGGGTTCTATCTGAACAAAGCTAGCTACAGGATTGTGTTGAATTTCCTGACTGAAAAAGGAGAATTGAAGAGGGCCAGTGAGTTGTTGGGTCTGATGTTGAATAGGGGGTTTGTTCCTCACTATGCAACTTCAAATAATTTGCTGGTTCTTCTTTACAATGGTGGGATGGTGAATGATGCAGTAGAATCTTTGTTTGGGTTGTTAAAAATGGGGTTCAGACCTGAGCCTGAGTCTTGGTTTAATTTGGTGGATTTGATCTGCAGGGGGAGAAAACTTTTGCCTGCGTTTGAATTGCTTGATGAGTTG

Coding sequence (CDS)

CCAAATACATGCATTTTCAACATCTTAGTTAAACACCATTGCAGAAATGGAGATCTTCAAGCTGCTTTTGAAGTTGTGAAGGAAATGAAAAGTGCTACTAAAGTCTCTTATCCTAATCTAATCACCTACTCAACTCTGATCGGCGGCCTCTGCAAAAATGGAAAACTTAAAGAAGCCATTGAACTTTTTGAGGAGATGGTTTCAAAGGACAAGATTTTGCCTGATGCCTTAACTTACAATATTCTGATCAATGGTTTTTGTCAAGGAGGGAAAGTTGACCGTGCAAGGACAATAATAGAGTTCATGAAAAGCAATGGATGCAGTCCTAATTTATTCAATTACTCAGTCTTAATGAACGGCTTCTGTAAGGAGGGAAGACTGCAAGAGGCCAAGGAAGTTTTCGACGAAATGAAGCGGCTCGGGATGAGGCCCGACACAGTCAGCTACACTACTCTAATCAACTGCCTCTGTAGAACCGGAAGGGTTGACGAGGCAACAGAGTTACTCCAGCAGATGAAGGAAAAAGATTGCCGAGCCGATACCGTAACATTGAACGTGATGCTCGGAGGGCTATGCCGAGAAGGTAGGCTCGAGGAGGCTCTCGATATGGTGCAGAAACTCCCTTATGAGGGGTTCTATCTGAACAAAGCTAGCTACAGGATTGTGTTGAATTTCCTGACTGAAAAAGGAGAATTGAAGAGGGCCAGTGAGTTGTTGGGTCTGATGTTGAATAGGGGGTTTGTTCCTCACTATGCAACTTCAAATAATTTGCTGGTTCTTCTTTACAATGGTGGGATGGTGAATGATGCAGTAGAATCTTTGTTTGGGTTGTTAAAAATGGGGTTCAGACCTGAGCCTGAGTCTTGGTTTAATTTGGTGGATTTGATCTGCAGGGGGAGAAAACTTTTGCCTGCGTTTGAATTGCTTGATGAGTTG

Protein sequence

PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAIELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNGFCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRADTVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLGLMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGRKLLPAFELLDEL

Homology

[Close]

BLAST of MC11g0589.1 vs. ExPASy Swiss-Prot
Match: Q3E9F0 (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 5.3e-101
Identity = 176/312 (56.41%), Postives = 230/312 (73.72%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHC+NGD+  AF VV+EMK  + +SYPN ITYSTL+  L  + + KEA+
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMK-RSGISYPNSITYSTLMDCLFAHSRSKEAV 253

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFE+M+SK+ I PD +T+N++INGFC+ G+V+RA+ I++FMK NGC+PN++NYS LMNG
Sbjct: 254 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 313

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCK G++QEAK+ FDE+K+ G++ DTV YTTL+NC CR G  DEA +LL +MK   CRAD
Sbjct: 314 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 373

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           T+T NV+L GL  EGR EEAL M+ +   EG +LNK SYRI+LN L   GEL++A + L 
Sbjct: 374 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 433

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           +M  RG  PH+AT N L+V L   G     V  L G L++G  P P+SW  +V+ IC+ R
Sbjct: 434 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKER 493

Query: 301 KLLPAFELLDEL 313
           KL+  FELLD L
Sbjct: 494 KLVHVFELLDSL 504

[Close]

BLAST of MC11g0589.1 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-54
Identity = 106/312 (33.97%), Postives = 180/312 (57.69%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           P+   +N+++  +C+ G++  A  V+  M  +     P+++TY+T++  LC +GKLK+A+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS-----PDVVTYNTILRSLCDSGKLKQAM 229

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           E+ + M+ +D   PD +TY ILI   C+   V  A  +++ M+  GC+P++  Y+VL+NG
Sbjct: 230 EVLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 289

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
            CKEGRL EA +  ++M   G +P+ +++  ++  +C TGR  +A +LL  M  K     
Sbjct: 290 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 349

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
            VT N+++  LCR+G L  A+D+++K+P  G   N  SY  +L+   ++ ++ RA E L 
Sbjct: 350 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 409

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
            M++RG  P   T N +L  L   G V DAVE L  L   G  P   ++  ++D + +  
Sbjct: 410 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 469

Query: 301 KLLPAFELLDEL 313
           K   A +LLDE+
Sbjct: 470 KTGKAIKLLDEM 475

[Close]

BLAST of MC11g0589.1 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-47
Identity = 95/312 (30.45%), Postives = 176/312 (56.41%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           P+T ++  L+   C+ GD++AA +   EM S  +   P+++TY+ +I G C+ G + EA 
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHS--RDITPDVLTYTAIISGFCQIGDMVEAG 408

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           +LF EM  K  + PD++T+  LING+C+ G +  A  +   M   GCSPN+  Y+ L++G
Sbjct: 409 KLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 468

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
            CKEG L  A E+  EM ++G++P+  +Y +++N LC++G ++EA +L+ + +     AD
Sbjct: 469 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 528

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           TVT   ++   C+ G +++A ++++++  +G      ++ +++N     G L+   +LL 
Sbjct: 529 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 588

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
            ML +G  P+  T N+L+        +  A      +   G  P+ +++ NLV   C+ R
Sbjct: 589 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 648

Query: 301 KLLPAFELLDEL 313
            +  A+ L  E+
Sbjct: 649 NMKEAWFLFQEM 657

[Close]

BLAST of MC11g0589.1 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-45
Identity = 96/312 (30.77%), Postives = 170/312 (54.49%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           P+   +  L+   C+ G + AA ++        ++  P ++ ++TLI G   +G+L +A 
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLF------YRIPKPEIVIFNTLIHGFVTHGRLDDAK 379

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
            +  +MV+   I+PD  TYN LI G+ + G V  A  ++  M++ GC PN+++Y++L++G
Sbjct: 380 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 439

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCK G++ EA  V +EM   G++P+TV +  LI+  C+  R+ EA E+ ++M  K C+ D
Sbjct: 440 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 499

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
             T N ++ GLC    ++ AL +++ +  EG   N  +Y  ++N    +GE+K A +L+ 
Sbjct: 500 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 559

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
            M+ +G      T N+L+  L   G V+ A      +L+ G  P   S   L++ +CR  
Sbjct: 560 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 619

Query: 301 KLLPAFELLDEL 313
            +  A E   E+
Sbjct: 620 MVEEAVEFQKEM 625

[Close]

BLAST of MC11g0589.1 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.7e-44
Identity = 101/312 (32.37%), Postives = 174/312 (55.77%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PN   +N+ ++  C+ G+L  A  +V  +    +   P++ITY+ LI GLCKN K +EA 
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCL--IEQGPKPDVITYNNLIYGLCKNSKFQEAE 308

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
               +MV+ + + PD+ TYN LI G+C+GG V  A  I+     NG  P+ F Y  L++G
Sbjct: 309 VYLGKMVN-EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 368

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
            C EG    A  +F+E    G++P+ + Y TLI  L   G + EA +L  +M EK    +
Sbjct: 369 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 428

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
             T N+++ GLC+ G + +A  +V+ +  +G++ +  ++ I+++  + + +++ A E+L 
Sbjct: 429 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 488

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           +ML+ G  P   T N+LL  L       D +E+   +++ G  P   ++  L++ +CR R
Sbjct: 489 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 548

Query: 301 KLLPAFELLDEL 313
           KL  A  LL+E+
Sbjct: 549 KLDEALGLLEEM 557

[Close]

BLAST of MC11g0589.1 vs. NCBI nr
Match: XP_022143108.1 (pentatricopeptide repeat-containing protein At5g18475 [Momordica charantia] >XP_022143116.1 pentatricopeptide repeat-containing protein At5g18475 [Momordica charantia])

HSP 1 Score: 630 bits (1625), Expect = 1.29e-224
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI
Sbjct: 197 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 256

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG
Sbjct: 257 ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 316

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD
Sbjct: 317 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 376

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG
Sbjct: 377 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 436

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPHYATSNNLLVLL NGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR
Sbjct: 437 LMLNRGFVPHYATSNNLLVLLXNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 496

Query: 301 KLLPAFELLDEL 312
           KLLPAFELLDEL
Sbjct: 497 KLLPAFELLDEL 508

[Close]

BLAST of MC11g0589.1 vs. NCBI nr
Match: XP_038900183.1 (pentatricopeptide repeat-containing protein At5g18475 [Benincasa hispida])

HSP 1 Score: 575 bits (1482), Expect = 4.30e-203
Identity = 280/312 (89.74%), Postives = 299/312 (95.83%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRN DLQAAFEVVKEMKSA +VSYP+LITYSTLIGGLC++GKL+EAI
Sbjct: 188 PNTCIFNILVKHHCRNRDLQAAFEVVKEMKSA-RVSYPDLITYSTLIGGLCESGKLREAI 247

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRAR I+EFMKSNGCSPN+FNYSVLMNG
Sbjct: 248 ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARRIVEFMKSNGCSPNVFNYSVLMNG 307

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCKEGRLQEAKEVFDEMK LGM+PDT+SYTTL+NCLCRTGRVDEATELLQQMK +DCRAD
Sbjct: 308 FCKEGRLQEAKEVFDEMKSLGMKPDTISYTTLLNCLCRTGRVDEATELLQQMKGRDCRAD 367

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           TVTLNVMLGGLCREGR EEALDMVQKLP+EGFYLNK SYRIVLNFL++KGELKRA+ELLG
Sbjct: 368 TVTLNVMLGGLCREGRFEEALDMVQKLPFEGFYLNKGSYRIVLNFLSQKGELKRATELLG 427

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPHYATSNNLLVLL N GMVNDAVESLFGLL+MGF+PEP SWF LVDLICR R
Sbjct: 428 LMLNRGFVPHYATSNNLLVLLCNNGMVNDAVESLFGLLEMGFKPEPRSWFTLVDLICRER 487

Query: 301 KLLPAFELLDEL 312
           K+LP FELL+EL
Sbjct: 488 KMLPVFELLNEL 498

[Close]

BLAST of MC11g0589.1 vs. NCBI nr
Match: XP_022937178.1 (pentatricopeptide repeat-containing protein At5g18475 isoform X2 [Cucurbita moschata])

HSP 1 Score: 566 bits (1458), Expect = 1.50e-199
Identity = 273/312 (87.50%), Postives = 300/312 (96.15%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNG+LQAAFEVV+EMKSA +VSYPNLITYSTLIGGLC++GKLKEAI
Sbjct: 176 PNTCIFNILVKHHCRNGNLQAAFEVVREMKSA-RVSYPNLITYSTLIGGLCQSGKLKEAI 235

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFE MVSKDKILPDALTYNILINGFCQGGKVDRAR I+EFMKSNGCSPN+FNYSVLMNG
Sbjct: 236 ELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG 295

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCKEG+LQEAKEVF+EMK LGM+PDTVSYTTL+NCLCRTGRVDEATELLQ+MK++DCRAD
Sbjct: 296 FCKEGKLQEAKEVFNEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD 355

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           T+TLNV+LGGLCREGR EEALDMVQKLP+EG+YLNK SYRIVLNFL++KGELKRA+ELLG
Sbjct: 356 TITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLG 415

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPHYATSN+LLVLL N GMV DAVESL GLL+MGF+PEP+SWF+LVDLICR +
Sbjct: 416 LMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREK 475

Query: 301 KLLPAFELLDEL 312
           KLLP FELLDEL
Sbjct: 476 KLLPVFELLDEL 486

[Close]

BLAST of MC11g0589.1 vs. NCBI nr
Match: XP_022937177.1 (pentatricopeptide repeat-containing protein At5g18475 isoform X1 [Cucurbita moschata])

HSP 1 Score: 566 bits (1458), Expect = 1.61e-199
Identity = 273/312 (87.50%), Postives = 300/312 (96.15%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNG+LQAAFEVV+EMKSA +VSYPNLITYSTLIGGLC++GKLKEAI
Sbjct: 176 PNTCIFNILVKHHCRNGNLQAAFEVVREMKSA-RVSYPNLITYSTLIGGLCQSGKLKEAI 235

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFE MVSKDKILPDALTYNILINGFCQGGKVDRAR I+EFMKSNGCSPN+FNYSVLMNG
Sbjct: 236 ELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG 295

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCKEG+LQEAKEVF+EMK LGM+PDTVSYTTL+NCLCRTGRVDEATELLQ+MK++DCRAD
Sbjct: 296 FCKEGKLQEAKEVFNEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD 355

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           T+TLNV+LGGLCREGR EEALDMVQKLP+EG+YLNK SYRIVLNFL++KGELKRA+ELLG
Sbjct: 356 TITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLG 415

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPHYATSN+LLVLL N GMV DAVESL GLL+MGF+PEP+SWF+LVDLICR +
Sbjct: 416 LMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREK 475

Query: 301 KLLPAFELLDEL 312
           KLLP FELLDEL
Sbjct: 476 KLLPVFELLDEL 486

[Close]

BLAST of MC11g0589.1 vs. NCBI nr
Match: XP_023536311.1 (pentatricopeptide repeat-containing protein At5g18475 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565 bits (1457), Expect = 2.13e-199
Identity = 274/312 (87.82%), Postives = 298/312 (95.51%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNG+LQAAFEVV+EMKSA +VSYPNLITYSTLIGGLC++GKLKEAI
Sbjct: 176 PNTCIFNILVKHHCRNGNLQAAFEVVREMKSA-RVSYPNLITYSTLIGGLCQSGKLKEAI 235

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFE MVSKDKILPDALTYNILINGFCQGGKVDRAR I+EFMKSNGCSPN+FNYSVLMNG
Sbjct: 236 ELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG 295

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCKEG+LQEAKEVFDEMK LGM+PDTVSYTTL+NCLCRTGRVDEA ELLQQMK++DCRAD
Sbjct: 296 FCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEANELLQQMKDQDCRAD 355

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
            VTLNV+LGGLCREGR EEALDMVQKLP+EG+YLNK SYRIVLNFL++KGELKRA+ELLG
Sbjct: 356 VVTLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLG 415

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPHYATSN+LLVLL N GMV DAVESL GLL+MGF+PEP+SWF+LVDLICR +
Sbjct: 416 LMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLVGLLEMGFKPEPDSWFSLVDLICREK 475

Query: 301 KLLPAFELLDEL 312
           KLLP FELLDEL
Sbjct: 476 KLLPVFELLDEL 486

[Close]

BLAST of MC11g0589.1 vs. ExPASy TrEMBL
Match: A0A6J1CPA0 (pentatricopeptide repeat-containing protein At5g18475 OS=Momordica charantia OX=3673 GN=LOC111013056 PE=4 SV=1)

HSP 1 Score: 630 bits (1625), Expect = 6.26e-225
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI
Sbjct: 197 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 256

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG
Sbjct: 257 ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 316

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD
Sbjct: 317 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 376

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG
Sbjct: 377 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 436

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPHYATSNNLLVLL NGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR
Sbjct: 437 LMLNRGFVPHYATSNNLLVLLXNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 496

Query: 301 KLLPAFELLDEL 312
           KLLPAFELLDEL
Sbjct: 497 KLLPAFELLDEL 508

[Close]

BLAST of MC11g0589.1 vs. ExPASy TrEMBL
Match: A0A6J1FFA8 (pentatricopeptide repeat-containing protein At5g18475 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443553 PE=4 SV=1)

HSP 1 Score: 566 bits (1458), Expect = 7.27e-200
Identity = 273/312 (87.50%), Postives = 300/312 (96.15%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNG+LQAAFEVV+EMKSA +VSYPNLITYSTLIGGLC++GKLKEAI
Sbjct: 176 PNTCIFNILVKHHCRNGNLQAAFEVVREMKSA-RVSYPNLITYSTLIGGLCQSGKLKEAI 235

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFE MVSKDKILPDALTYNILINGFCQGGKVDRAR I+EFMKSNGCSPN+FNYSVLMNG
Sbjct: 236 ELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG 295

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCKEG+LQEAKEVF+EMK LGM+PDTVSYTTL+NCLCRTGRVDEATELLQ+MK++DCRAD
Sbjct: 296 FCKEGKLQEAKEVFNEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD 355

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           T+TLNV+LGGLCREGR EEALDMVQKLP+EG+YLNK SYRIVLNFL++KGELKRA+ELLG
Sbjct: 356 TITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLG 415

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPHYATSN+LLVLL N GMV DAVESL GLL+MGF+PEP+SWF+LVDLICR +
Sbjct: 416 LMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREK 475

Query: 301 KLLPAFELLDEL 312
           KLLP FELLDEL
Sbjct: 476 KLLPVFELLDEL 486

[Close]

BLAST of MC11g0589.1 vs. ExPASy TrEMBL
Match: A0A6J1FAE2 (pentatricopeptide repeat-containing protein At5g18475 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443553 PE=4 SV=1)

HSP 1 Score: 566 bits (1458), Expect = 7.79e-200
Identity = 273/312 (87.50%), Postives = 300/312 (96.15%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNG+LQAAFEVV+EMKSA +VSYPNLITYSTLIGGLC++GKLKEAI
Sbjct: 176 PNTCIFNILVKHHCRNGNLQAAFEVVREMKSA-RVSYPNLITYSTLIGGLCQSGKLKEAI 235

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFE MVSKDKILPDALTYNILINGFCQGGKVDRAR I+EFMKSNGCSPN+FNYSVLMNG
Sbjct: 236 ELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG 295

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCKEG+LQEAKEVF+EMK LGM+PDTVSYTTL+NCLCRTGRVDEATELLQ+MK++DCRAD
Sbjct: 296 FCKEGKLQEAKEVFNEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD 355

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           T+TLNV+LGGLCREGR EEALDMVQKLP+EG+YLNK SYRIVLNFL++KGELKRA+ELLG
Sbjct: 356 TITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLG 415

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPHYATSN+LLVLL N GMV DAVESL GLL+MGF+PEP+SWF+LVDLICR +
Sbjct: 416 LMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREK 475

Query: 301 KLLPAFELLDEL 312
           KLLP FELLDEL
Sbjct: 476 KLLPVFELLDEL 486

[Close]

BLAST of MC11g0589.1 vs. ExPASy TrEMBL
Match: A0A5A7T5D4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005770 PE=4 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.12e-198
Identity = 273/312 (87.50%), Postives = 294/312 (94.23%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA +VSYPNL+TYSTLIGGLC+NGKLKEAI
Sbjct: 187 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA-RVSYPNLVTYSTLIGGLCENGKLKEAI 246

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           E FEEMVSKDKILPDALTYNILINGFCQGGKVDRAR I+EFMKSNGC PN+FNYS LMNG
Sbjct: 247 EFFEEMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCIPNVFNYSALMNG 306

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           +CKEGRLQEAKEVF+E+K LGM+PDT+SYTTLINCLCRTGRVDEATELLQQMK+KDCRAD
Sbjct: 307 YCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRAD 366

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           TVT NVMLGGLCREGR EEALDMVQKLP+EGFYLNK SYRIVLNFLT+KGEL+RA+ELLG
Sbjct: 367 TVTFNVMLGGLCREGRFEEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRRATELLG 426

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPH+ATSN LL+LL N GMV DAVESL GLL+MGF+PE ESWF LV+LICR R
Sbjct: 427 LMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVNLICRER 486

Query: 301 KLLPAFELLDEL 312
           K+LP FELLDEL
Sbjct: 487 KMLPMFELLDEL 497

[Close]

BLAST of MC11g0589.1 vs. ExPASy TrEMBL
Match: A0A1S3CQL3 (pentatricopeptide repeat-containing protein At5g18475 OS=Cucumis melo OX=3656 GN=LOC103503669 PE=4 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.12e-198
Identity = 273/312 (87.50%), Postives = 294/312 (94.23%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA +VSYPNL+TYSTLIGGLC+NGKLKEAI
Sbjct: 187 PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSA-RVSYPNLVTYSTLIGGLCENGKLKEAI 246

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           E FEEMVSKDKILPDALTYNILINGFCQGGKVDRAR I+EFMKSNGC PN+FNYS LMNG
Sbjct: 247 EFFEEMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCIPNVFNYSALMNG 306

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           +CKEGRLQEAKEVF+E+K LGM+PDT+SYTTLINCLCRTGRVDEATELLQQMK+KDCRAD
Sbjct: 307 YCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRAD 366

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           TVT NVMLGGLCREGR EEALDMVQKLP+EGFYLNK SYRIVLNFLT+KGEL+RA+ELLG
Sbjct: 367 TVTFNVMLGGLCREGRFEEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRRATELLG 426

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           LMLNRGFVPH+ATSN LL+LL N GMV DAVESL GLL+MGF+PE ESWF LV+LICR R
Sbjct: 427 LMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVNLICRER 486

Query: 301 KLLPAFELLDEL 312
           K+LP FELLDEL
Sbjct: 487 KMLPMFELLDEL 497

[Close]

BLAST of MC11g0589.1 vs. TAIR 10
Match: AT5G18475.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 369.0 bits (946), Expect = 3.7e-102
Identity = 176/312 (56.41%), Postives = 230/312 (73.72%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           PNTCIFNILVKHHC+NGD+  AF VV+EMK  + +SYPN ITYSTL+  L  + + KEA+
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMK-RSGISYPNSITYSTLMDCLFAHSRSKEAV 253

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           ELFE+M+SK+ I PD +T+N++INGFC+ G+V+RA+ I++FMK NGC+PN++NYS LMNG
Sbjct: 254 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 313

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCK G++QEAK+ FDE+K+ G++ DTV YTTL+NC CR G  DEA +LL +MK   CRAD
Sbjct: 314 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 373

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           T+T NV+L GL  EGR EEAL M+ +   EG +LNK SYRI+LN L   GEL++A + L 
Sbjct: 374 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 433

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
           +M  RG  PH+AT N L+V L   G     V  L G L++G  P P+SW  +V+ IC+ R
Sbjct: 434 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKER 493

Query: 301 KLLPAFELLDEL 313
           KL+  FELLD L
Sbjct: 494 KLVHVFELLDSL 504

[Close]

BLAST of MC11g0589.1 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 2.6e-55
Identity = 106/312 (33.97%), Postives = 180/312 (57.69%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           P+   +N+++  +C+ G++  A  V+  M  +     P+++TY+T++  LC +GKLK+A+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS-----PDVVTYNTILRSLCDSGKLKQAM 229

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           E+ + M+ +D   PD +TY ILI   C+   V  A  +++ M+  GC+P++  Y+VL+NG
Sbjct: 230 EVLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 289

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
            CKEGRL EA +  ++M   G +P+ +++  ++  +C TGR  +A +LL  M  K     
Sbjct: 290 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 349

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
            VT N+++  LCR+G L  A+D+++K+P  G   N  SY  +L+   ++ ++ RA E L 
Sbjct: 350 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 409

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
            M++RG  P   T N +L  L   G V DAVE L  L   G  P   ++  ++D + +  
Sbjct: 410 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 469

Query: 301 KLLPAFELLDEL 313
           K   A +LLDE+
Sbjct: 470 KTGKAIKLLDEM 475

[Close]

BLAST of MC11g0589.1 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48
Identity = 95/312 (30.45%), Postives = 176/312 (56.41%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           P+T ++  L+   C+ GD++AA +   EM S  +   P+++TY+ +I G C+ G + EA 
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHS--RDITPDVLTYTAIISGFCQIGDMVEAG 408

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           +LF EM  K  + PD++T+  LING+C+ G +  A  +   M   GCSPN+  Y+ L++G
Sbjct: 409 KLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 468

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
            CKEG L  A E+  EM ++G++P+  +Y +++N LC++G ++EA +L+ + +     AD
Sbjct: 469 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 528

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           TVT   ++   C+ G +++A ++++++  +G      ++ +++N     G L+   +LL 
Sbjct: 529 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 588

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
            ML +G  P+  T N+L+        +  A      +   G  P+ +++ NLV   C+ R
Sbjct: 589 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 648

Query: 301 KLLPAFELLDEL 313
            +  A+ L  E+
Sbjct: 649 NMKEAWFLFQEM 657

[Close]

BLAST of MC11g0589.1 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48
Identity = 95/312 (30.45%), Postives = 176/312 (56.41%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           P+T ++  L+   C+ GD++AA +   EM S  +   P+++TY+ +I G C+ G + EA 
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHS--RDITPDVLTYTAIISGFCQIGDMVEAG 408

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
           +LF EM  K  + PD++T+  LING+C+ G +  A  +   M   GCSPN+  Y+ L++G
Sbjct: 409 KLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 468

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
            CKEG L  A E+  EM ++G++P+  +Y +++N LC++G ++EA +L+ + +     AD
Sbjct: 469 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 528

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
           TVT   ++   C+ G +++A ++++++  +G      ++ +++N     G L+   +LL 
Sbjct: 529 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 588

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
            ML +G  P+  T N+L+        +  A      +   G  P+ +++ NLV   C+ R
Sbjct: 589 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 648

Query: 301 KLLPAFELLDEL 313
            +  A+ L  E+
Sbjct: 649 NMKEAWFLFQEM 657

[Close]

BLAST of MC11g0589.1 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-46
Identity = 96/312 (30.77%), Postives = 170/312 (54.49%), Query Frame = 0


Query: 1   PNTCIFNILVKHHCRNGDLQAAFEVVKEMKSATKVSYPNLITYSTLIGGLCKNGKLKEAI 60
           P+   +  L+   C+ G + AA ++        ++  P ++ ++TLI G   +G+L +A 
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLF------YRIPKPEIVIFNTLIHGFVTHGRLDDAK 379

Query: 61  ELFEEMVSKDKILPDALTYNILINGFCQGGKVDRARTIIEFMKSNGCSPNLFNYSVLMNG 120
            +  +MV+   I+PD  TYN LI G+ + G V  A  ++  M++ GC PN+++Y++L++G
Sbjct: 380 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 439

Query: 121 FCKEGRLQEAKEVFDEMKRLGMRPDTVSYTTLINCLCRTGRVDEATELLQQMKEKDCRAD 180
           FCK G++ EA  V +EM   G++P+TV +  LI+  C+  R+ EA E+ ++M  K C+ D
Sbjct: 440 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 499

Query: 181 TVTLNVMLGGLCREGRLEEALDMVQKLPYEGFYLNKASYRIVLNFLTEKGELKRASELLG 240
             T N ++ GLC    ++ AL +++ +  EG   N  +Y  ++N    +GE+K A +L+ 
Sbjct: 500 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 559

Query: 241 LMLNRGFVPHYATSNNLLVLLYNGGMVNDAVESLFGLLKMGFRPEPESWFNLVDLICRGR 300
            M+ +G      T N+L+  L   G V+ A      +L+ G  P   S   L++ +CR  
Sbjct: 560 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 619

Query: 301 KLLPAFELLDEL 313
            +  A E   E+
Sbjct: 620 MVEEAVEFQKEM 625

The following BLAST results are available for this feature:

BLAST of MC11g0589.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E9F0	5.3e-101	56.41	Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX...	[more]
Q3EDF8	3.7e-54	33.97	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	2.6e-47	30.45	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9FMF6	1.8e-45	30.77	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
Q9CA58	7.7e-44	32.37	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]

BLAST of MC11g0589.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143108.1	1.29e-224	99.68	pentatricopeptide repeat-containing protein At5g18475 [Momordica charantia] >XP_...	[more]
XP_038900183.1	4.30e-203	89.74	pentatricopeptide repeat-containing protein At5g18475 [Benincasa hispida]	[more]
XP_022937178.1	1.50e-199	87.50	pentatricopeptide repeat-containing protein At5g18475 isoform X2 [Cucurbita mosc...	[more]
XP_022937177.1	1.61e-199	87.50	pentatricopeptide repeat-containing protein At5g18475 isoform X1 [Cucurbita mosc...	[more]
XP_023536311.1	2.13e-199	87.82	pentatricopeptide repeat-containing protein At5g18475 isoform X4 [Cucurbita pepo...	[more]

BLAST of MC11g0589.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPA0	6.26e-225	99.68	pentatricopeptide repeat-containing protein At5g18475 OS=Momordica charantia OX=...	[more]
A0A6J1FFA8	7.27e-200	87.50	pentatricopeptide repeat-containing protein At5g18475 isoform X2 OS=Cucurbita mo...	[more]
A0A6J1FAE2	7.79e-200	87.50	pentatricopeptide repeat-containing protein At5g18475 isoform X1 OS=Cucurbita mo...	[more]
A0A5A7T5D4	1.12e-198	87.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CQL3	1.12e-198	87.50	pentatricopeptide repeat-containing protein At5g18475 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of MC11g0589.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18475.1	3.7e-102	56.41	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	2.6e-55	33.97	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.1	1.8e-48	30.45	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	1.8e-48	30.45	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G64320.1	1.3e-46	30.77	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 218..249 e-value: 9.9E-4 score: 17.1 coord: 114..146 e-value: 4.3E-11 score: 40.3 coord: 41..76 e-value: 1.2E-10 score: 38.9 coord: 147..180 e-value: 1.9E-11 score: 41.4 coord: 182..207 e-value: 1.8E-5 score: 22.6 coord: 5..32 e-value: 4.5E-6 score: 24.5 coord: 78..110 e-value: 2.0E-10 score: 38.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 218..247 e-value: 0.71 score: 10.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 38..88 e-value: 8.3E-18 score: 64.3 coord: 144..193 e-value: 3.0E-16 score: 59.3
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 1..30 e-value: 6.4E-8 score: 32.2 coord: 105..138 e-value: 3.1E-13 score: 49.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 145..179 score: 13.515341
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 39..73 score: 12.495939
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 110..144 score: 14.326477
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 180..214 score: 11.016164
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 75..109 score: 13.394766
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 215..249 score: 9.580234
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 2..32 score: 9.29524
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 206..312 e-value: 1.3E-11 score: 46.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..68 e-value: 6.0E-18 score: 67.0 coord: 140..205 e-value: 2.4E-23 score: 84.6 coord: 69..139 e-value: 2.7E-25 score: 91.0
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 1..312
None	No IPR available	PANTHER	PTHR47933:SF23	FERTILITY RESTORER HOMOLOGUE A-LIKE	coord: 1..312
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 51..248

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0589	MC11g0589	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0589.1-cds	MC11g0589.1-cds-MC11:4612045..4612980	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0589.1	MC11g0589.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding