MC11g0477.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0477.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA-directed RNA polymerase subunit beta
Location	MC11: 3692304 .. 3695334 (+)
Sequence length	1045
RNA-Seq Expression	MC11g0477.1
Synteny	MC11g0477.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTAAAGTCTAAAATGGTAAGTTGGCCAAATAAATAAAATCTACGCCTCACCTCCAAAACGCCAAAAAACATCGACCATCGATTTCGAGGAGGAGGAGGAGGAGAAGAAAAAAAAAAGGAGGGAAGGGAAATAGTTTTCTCCAGCGGAATAGGATGTCATGTTGTTCATCCCTATCAGCTGCTCCTACCTCCATGTCTTTGATTACCAAGCGCAAATTCCCGATTGCTGTTGACAAACCTGCGATCGTTTCCATGAATTCTCGATTTAGAGCTTCCGCTGAAGTTCCTGATTTTCTCCCCGCAGATTGGTGCGACACTAACCTATAGAATTACGCTTTTTCACTATTCCTTGTAATTTGTTGAGTTTTCGAATAGTATTACCGAGAAACGAAGTTTGATATCGAGAGGAATGGAAAATTGATTTTGCTCATGTTCGCAGATTGGTGCGCTTGCGAACCTAGAGAAAATCATGCTTTTGCACTCCATTATCAATTTTTGAGTTTTCGCATAGTATTATCGAGTAACGAAGTTCGATCTCGAGAGGAATGGAAAATTGATTTTTCTCATGTTCGCAGATTGGTGCGCTTGCGAACCTAGAGAAAATTATGCTTTTGCACTCTTCATTATCATTTTTTGAGTTTTCGCATAGTATTATCAAATAACGAGGTTTGATCTAGATGAATGGAAATTTGATTTTGCTCATGTTCGACTGTGAATGGTCGTATCTGAGATGTTTCAATTCACTTCATGTTTTTATCAAGAAATATGGCATGATTGTGTTTCTTATCACCCTGAAATTACCGAGTTCAACAATTGGATGTTTGGCTTCCATCAGGTCTACTCTTTCGGCTAATGGGGCAAATTCTTTCTTCTTGTCTTAATCTTCCATTCTCCATAAACTTCCACGAGCAACTACACAATTTTCTCGTTCCTCTGATGTGAAGGTTTCTGGAAATGAATCTCTGCAAAGATATCAAATTCCTATTCATTAGGTTTTCCATGATAAGATGATGACTTTGCTGTTGTTATTATACTGTTGTTGGGCCAAACCAGTTTCATGAAATCTGAACTTCTTCATTTATTTTATTTTGTAGGAATGAAGCACACAAGAAGAATCCTCTAGGTCCAAGTTTACATGTAACTGTTCAACTATGCAAGTTAGTACTAGATTTTGTAGTCGTTTCTCTGTCAATTAACTTTATCTTGAAACTTTCTATAGTTTACTGCAGAGGAAGCTATTCAACACCAGCTTGATGCACTGAGATACAACGATCAACCCCATCAAGATTATGGAATCGAGGTCATGTACCAGGTAGTGTGCATTATAAAGTGGCTTATTTATGCCATCTTGATCGCTTGTGTAATGACATGGTGGCCTGTTTATTCAATGCCTCTGATATATAACAGTTTGCTGGATTCGATCCTCTTCGAAGGTCTACATATTTCGGTCCCTTCTTTGATTTGGGACAGGTATCATTTGAAACTTAACAATTAACATGTGTTGTACCGTATCTGCTCATTCCTTTCTTCATTTGCTGTATTTTTTGATGGTGCAGTTTGAGAGATTCAGACGAGTGTTCCATCATTCGACCTATCGTGTATTGCTAGGCCATAAAGAGAGGAAGATCTTGAGCTGTTTGTTTGTAGAGGAGGTAAAGCAGTCTTGATAATGAACTTGATCGATTCTTGTGTCTAGTAGCCAATGATCCCATGATGTGCTTAAGTGCTCTGAGTACTTTTTTGTGCCTTCTATGCCAGTAAATTTCTTTACTGTAAAGTACTATCCTGTTGATTTTACAAACTGTGAAACAGAACCGATTCAAGCAGCGAGTATGGATACGGGGCTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGGTTAGACTACGTTCTTTTGAATATGTAATCATTAGTAATCTGCAAAGATTGCTTTTGTCTCTAGATTATATGATAAACAAATTCATAGTACCATTAGGTTGATGCCCCCATCAAAAAGATTTCTCTGGAGAATTGAACACTTGAACCTGTAGATTTTCTTTCATTCCCTCTGTTGCCAGTCAATTCATAATCAATCAGTTTTGAACCTATTACAGTCCACACCCACTTATTTGTTGAGAATGTCATGATTCAAGCCACCCACCTGAATACACTTGAACGACGAGTTCTGTTTCAATATAGCTATCATTATATAGGAATTATAACCTCCTTAGGATTAATGTGGGTGGGCCATGAGCATAATATGTATAAAAAACACGTCTTTAACTAAAATGGTTCCACATGGAAATCTAAGGATATAGACTGTTAACACCTCAATAGAGAAACCCTCTTTTAAGAATCACAGCCATTTCAATCTTGAACAGTCTTCCTTTTCATCTATCAACGAAAAGTTGTTTCTTGTTCAAAAAAAGAATCACGACGATTTCCCTTTTCGAGATCAAACTTCAAGGAACAACCTTAAACACTGAAGCTAGCTGTCTACTTCTGTTTTATAAAGCTGTGTATTCATCTATATATTTGAGAATTGATGAGAAGATCCATACTGACATTAAGTGTGGTAGACTGAGATAGACTTGTTTAAGTTGGAAGTAATTATAAAATCATAAACATACTGATATGCGTTCAATTATTTCTGAAACTTTGGGTTTTTGTTGGCAGAGGGTTGGTGGCTCATGGGATGGGTATTGGCTTACAGAGAGCTTACTTAATGATGGGGATGCATTTAGTGGAGGCTTAGCGTACTGAGAATGCTCTCCTCAAATTGGGTGCCTGGTTAGCAAACTTAGCATGATATTGTTCAATTTGTATATTTGAAATGTATATCATACGCCTGTAAGATCACATAACTTAGAATTTGTATATAATATTAACATAGTTACATTCTATCATTTGAGAATCCCCTTTGAGTCGGTTTGGGTTGGTCAGATTCTTCGAGTGATCGAGTTCTTTGAACACTCCAATAGACCATATCAATAATAGTATGATATATCTATCGAAACAAACAAAGTGTGTTACCCTCTA

mRNA sequence

GGCTAAAGTCTAAAATGGTAAGTTGGCCAAATAAATAAAATCTACGCCTCACCTCCAAAACGCCAAAAAACATCGACCATCGATTTCGAGGAGGAGGAGGAGGAGAAGAAAAAAAAAAGGAGGGAAGGGAAATAGTTTTCTCCAGCGGAATAGGATGTCATGTTGTTCATCCCTATCAGCTGCTCCTACCTCCATGTCTTTGATTACCAAGCGCAAATTCCCGATTGCTGTTGACAAACCTGCGATCGTTTCCATGAATTCTCGATTTAGAGCTTCCGCTGAAGTTCCTGATTTTCTCCCCGCAGATTGGAATGAAGCACACAAGAAGAATCCTCTAGGTCCAAGTTTACATTTTACTGCAGAGGAAGCTATTCAACACCAGCTTGATGCACTGAGATACAACGATCAACCCCATCAAGATTATGGAATCGAGGTCATGTACCAGTTTGCTGGATTCGATCCTCTTCGAAGGTCTACATATTTCGGTCCCTTCTTTGATTTGGGACAGTTTGAGAGATTCAGACGAGTGTTCCATCATTCGACCTATCGTGTATTGCTAGGCCATAAAGAGAGGAAGATCTTGAGCTGTTTGTTTGTAGAGGAGAACCGATTCAAGCAGCGAGTATGGATACGGGGCTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGAGGGTTGGTGGCTCATGGGATGGGTATTGGCTTACAGAGAGCTTACTTAATGATGGGGATGCATTTAGTGGAGGCTTAGCGTACTGAGAATGCTCTCCTCAAATTGGGTGCCTGGTTAGCAAACTTAGCATGATATTGTTCAATTTGTATATTTGAAATGTATATCATACGCCTGTAAGATCACATAACTTAGAATTTGTATATAATATTAACATAGTTACATTCTATCATTTGAGAATCCCCTTTGAGTCGGTTTGGGTTGGTCAGATTCTTCGAGTGATCGAGTTCTTTGAACACTCCAATAGACCATATCAATAATAGTATGATATATCTATCGAAACAAACAAAGTGTGTTACCCTCTA

Coding sequence (CDS)

ATGTCATGTTGTTCATCCCTATCAGCTGCTCCTACCTCCATGTCTTTGATTACCAAGCGCAAATTCCCGATTGCTGTTGACAAACCTGCGATCGTTTCCATGAATTCTCGATTTAGAGCTTCCGCTGAAGTTCCTGATTTTCTCCCCGCAGATTGGAATGAAGCACACAAGAAGAATCCTCTAGGTCCAAGTTTACATTTTACTGCAGAGGAAGCTATTCAACACCAGCTTGATGCACTGAGATACAACGATCAACCCCATCAAGATTATGGAATCGAGGTCATGTACCAGTTTGCTGGATTCGATCCTCTTCGAAGGTCTACATATTTCGGTCCCTTCTTTGATTTGGGACAGTTTGAGAGATTCAGACGAGTGTTCCATCATTCGACCTATCGTGTATTGCTAGGCCATAAAGAGAGGAAGATCTTGAGCTGTTTGTTTGTAGAGGAGAACCGATTCAAGCAGCGAGTATGGATACGGGGCTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGAGGGTTGGTGGCTCATGGGATGGGTATTGGCTTACAGAGAGCTTACTTAATGATGGGGATGCATTTAGTGGAGGCTTAGCGTACTGA

Protein sequence

MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNPLGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFERFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGGSWDGYWLTESLLNDGDAFSGGLAY

Homology

[Close]

BLAST of MC11g0477.1 vs. NCBI nr
Match: XP_022132533.1 (uncharacterized protein LOC111005365 isoform X1 [Momordica charantia])

HSP 1 Score: 425 bits (1093), Expect = 2.15e-150
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP
Sbjct: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. NCBI nr
Match: XP_004136341.2 (uncharacterized protein LOC101205248 isoform X1 [Cucumis sativus])

HSP 1 Score: 398 bits (1023), Expect = 1.02e-139
Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP IVSMNSRFRASAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. NCBI nr
Match: XP_008466381.1 (PREDICTED: uncharacterized protein LOC103503805 [Cucumis melo] >KAA0038797.1 uncharacterized protein E6C27_scaffold92G003520 [Cucumis melo var. makuwa] >TYK31418.1 uncharacterized protein E5676_scaffold455G007270 [Cucumis melo var. makuwa])

HSP 1 Score: 395 bits (1015), Expect = 1.69e-138
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP  VSMNSRFR SAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. NCBI nr
Match: XP_038898556.1 (uncharacterized protein LOC120086152 [Benincasa hispida])

HSP 1 Score: 394 bits (1013), Expect = 1.82e-137
Identity = 189/204 (92.65%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLIT RKF  +V+KP IVSM SRFRASAEVPDFLPADW++AHKK+P
Sbjct: 48  MSCCSSLSAAPTSMSLITNRKFTSSVNKPVIVSMYSRFRASAEVPDFLPADWHDAHKKDP 107

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 108 IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 167

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEEN FKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 168 RFRRVFHHSTYRVLLGHKERKILSSLFVEENLFKQRVWIRGCRPKEEEIFQFTMVQRVGG 227

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 228 SWDGYWLTESLLNDGDAFSGGLAY 251

[Close]

BLAST of MC11g0477.1 vs. NCBI nr
Match: XP_022981205.1 (uncharacterized protein LOC111480415 isoform X1 [Cucurbita maxima])

HSP 1 Score: 391 bits (1005), Expect = 5.64e-137
Identity = 188/204 (92.16%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLI+KRKF  +V+K  IVSMNSRFRASAEVPDFLPADW++AHKKNP
Sbjct: 1   MSCCSSLSAAPTSMSLISKRKFTRSVNKHVIVSMNSRFRASAEVPDFLPADWHQAHKKNP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           LGPSLHFTAEEAIQ QLDALRYND+PHQDYGIEVMYQFAGF+PL+RSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQRQLDALRYNDRPHQDYGIEVMYQFAGFNPLQRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS L VEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLIVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTES+LNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESVLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. ExPASy TrEMBL
Match: A0A6J1BWI6 (uncharacterized protein LOC111005365 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005365 PE=4 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 1.04e-150
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP
Sbjct: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. ExPASy TrEMBL
Match: A0A0A0LED5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878870 PE=4 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 4.92e-140
Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP IVSMNSRFRASAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. ExPASy TrEMBL
Match: A0A5D3E6H6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007270 PE=4 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 8.16e-139
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP  VSMNSRFR SAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. ExPASy TrEMBL
Match: A0A1S3CR52 (uncharacterized protein LOC103503805 OS=Cucumis melo OX=3656 GN=LOC103503805 PE=4 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 8.16e-139
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP  VSMNSRFR SAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. ExPASy TrEMBL
Match: A0A6J1IYU2 (uncharacterized protein LOC111480415 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480415 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 2.73e-137
Identity = 188/204 (92.16%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLI+KRKF  +V+K  IVSMNSRFRASAEVPDFLPADW++AHKKNP
Sbjct: 1   MSCCSSLSAAPTSMSLISKRKFTRSVNKHVIVSMNSRFRASAEVPDFLPADWHQAHKKNP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           LGPSLHFTAEEAIQ QLDALRYND+PHQDYGIEVMYQFAGF+PL+RSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQRQLDALRYNDRPHQDYGIEVMYQFAGFNPLQRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS L VEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLIVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTES+LNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESVLNDGDAFSGGLAY 204

[Close]

BLAST of MC11g0477.1 vs. TAIR 10
Match: AT2G25605.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 75 Blast hits to 75 proteins in 20 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). )

HSP 1 Score: 287.7 bits (735), Expect = 7.2e-78
Identity = 127/165 (76.97%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 40  ASAEVPDFLPADWNEAHKKNPLGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFA 99
           +S++VPDFL ADW E+ +K P GP L F+AE+A++HQLDAL+YND P  DYGIEVMY+FA
Sbjct: 36  SSSDVPDFLSADWLESRRKRPFGPRLDFSAEDAVRHQLDALKYNDHPRDDYGIEVMYRFA 95

Query: 100 GFDPLRRSTYFGPFFDLGQFERFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWI 159
           GFDP  RSTYFGPFFDLGQFERFRR+FHHS+YRVLLGHK+RK+LS LFVEENRFKQR+WI
Sbjct: 96  GFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLGHKDRKLLSSLFVEENRFKQRIWI 155

Query: 160 RGCRPKEEEIFQFTMVQRVGGSWDGYWLTESLLNDGDAFSGGLAY 205
           +G RP+EEEIF+FTM QR+GGSWDGYWLTESLL+DGD FSGG+AY
Sbjct: 156 QGNRPEEEEIFEFTMFQRIGGSWDGYWLTESLLHDGDVFSGGMAY 200

The following BLAST results are available for this feature:

BLAST of MC11g0477.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0477.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132533.1	2.15e-150	100.00	uncharacterized protein LOC111005365 isoform X1 [Momordica charantia]	[more]
XP_004136341.2	1.02e-139	93.14	uncharacterized protein LOC101205248 isoform X1 [Cucumis sativus]	[more]
XP_008466381.1	1.69e-138	92.16	PREDICTED: uncharacterized protein LOC103503805 [Cucumis melo] >KAA0038797.1 unc...	[more]
XP_038898556.1	1.82e-137	92.65	uncharacterized protein LOC120086152 [Benincasa hispida]	[more]
XP_022981205.1	5.64e-137	92.16	uncharacterized protein LOC111480415 isoform X1 [Cucurbita maxima]	[more]

BLAST of MC11g0477.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWI6	1.04e-150	100.00	uncharacterized protein LOC111005365 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LED5	4.92e-140	93.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878870 PE=4 SV=1	[more]
A0A5D3E6H6	8.16e-139	92.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CR52	8.16e-139	92.16	uncharacterized protein LOC103503805 OS=Cucumis melo OX=3656 GN=LOC103503805 PE=...	[more]
A0A6J1IYU2	2.73e-137	92.16	uncharacterized protein LOC111480415 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MC11g0477.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25605.1	7.2e-78	76.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35716	OS05G0574700 PROTEIN-RELATED	coord: 1..204
None	No IPR available	PANTHER	PTHR35716:SF1	OS05G0574700 PROTEIN	coord: 1..204

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0477	MC11g0477	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0477.1-utr5	MC11g0477.1-utr5-MC11:3692304..3692457	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0477.1-cds	MC11g0477.1-cds-MC11:3692458..3692612	CDS
MC11g0477.1-cds	MC11g0477.1-cds-MC11:3693399..3693441	CDS
MC11g0477.1-cds	MC11g0477.1-cds-MC11:3693524..3693616	CDS
MC11g0477.1-cds	MC11g0477.1-cds-MC11:3693712..3693774	CDS
MC11g0477.1-cds	MC11g0477.1-cds-MC11:3693861..3693956	CDS
MC11g0477.1-cds	MC11g0477.1-cds-MC11:3694117..3694194	CDS
MC11g0477.1-cds	MC11g0477.1-cds-MC11:3694972..3695058	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0477.1-utr3	MC11g0477.1-utr3-MC11:3695059..3695334	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0477.1	MC11g0477.1-protein	polypeptide