MC11g0392.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0392.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ER membrane protein complex subunit 4
Location	MC11: 3099394 .. 3102478 (+)
Sequence length	1178
RNA-Seq Expression	MC11g0392.1
Synteny	MC11g0392.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATTTTAAAAAATTAGGAACGGAAATTAGAAATTTGAGATATTAAACATTTGGAAAAGTTAGATATTCCCATAGCACAAGGACTTTAATCTCATTGAACTTTCCGGACCATAAGCCTTCAAAAAGGATCTGAATCGTGAAAGTTGAAACACCGGAAGCGACAATCACCACCACCGCATAATTGGAAACAGTATTCGGAATGGAGAAGGGCAAGGGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGACTTCACCGACAATTCTTCATCGTTCTCCACTCGCGATATTACTGATCCTCCCGGTTTCACTCGTGCTTCCCAAGATCAGGACGATTCAACTCTGAGCCGCCAGAAGAAAGATGCTGAATCCAATTGGAAGGCACAGGTGTTTCTCCAAATTCTATTTTGTTGGTTGATTAGGGTTTGTTATTCCTGATTTTTTTAATCAGTTTGGTTGTTGTTTTCTCACTGTTCCTGCTCTAATTTTTGCGTATTTCGCTGGGTGCTAGTTCTTGGATGGGATCAGCGAGTTTGGAAGCGCAGAAATAATCGATTACATTTTTAGGGAAATAGGGTGGATGAGATTGCTTTATAGTGGAAGCTTTGTGCTTTTCATTTGTAAGCAATTTAACTTTTGGAGCAAATTCAAAGCATGCTCAATGGTGAAAAATCGTAACGCTATTTTATAAAATGAGAGATTTATGAGGTAGCAAGGTCTTGATTTGTCATTAAATGCGAAGATCAGTAAGCCTGCAACAAGTTTAAACAATTTTCTTGACTGGTAATCGTTTTTCCCCCCTCGTCAAGAGTGTTTATCCATGTTGTGGACGTTTCTGACATGATATGAATCATGTGATGCAGTAACTTCAGTTCTAAGTATTTAATAGAGAAGATTTTTGTCCTGAATCTTTGTTCCGTGATGTTTTATTCTGCGTCTTTGTGCTCTTGATTAGAATATTTACAGTTAAATGGAGTAATCTAACATCGCAATTTATGAGCAGAAAGCTTGGGAAGTGGCGCAGGCTCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTACATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCCCTACAAGGCGTTGGAAAGGGTAGGATTAATATTTACTCTCTTTCCCAACTGCTGTTATTATTATTATTTTCTTAAGTTTAGCATGCTGTTGCCTTAATTGTTCTATAAGCATACTTTACCCGAAGTACATATGAGGAATGTAGTATTCATACGACTCATACGACATTTGGTTCTTTCTTCATGTATCGTGGACTATTGTACCTCCCCTATCCAGATTAACCCTTTTTGAATGACTCAACATCTTCCGCTCCCACAATCTAAGCTCCGCAAGGTTAAAGATTGAGAGATCTTCTGATGTAGCTATGTCCTCATTGATATTTTCTACTTTTTAATACTCATTCTGATTTGTTTTTTATGGGTATTGTTCTTTTAACATCTCCCCTTTCTGCACCGGCTTCTAAAACACTAAACTAAATTCTGATTGTCCTGTTTGTATAATTCATATATAAGATATGAGTTTGTGAAGTGTATGAAAAAAAAATAGCATCATTTGTGGGATGTTAGTGATTTTATTCTAGTAGATTTATCATACTGTTGCCAGTTGGTATTAATATTTATTTTTCCTGCAGTTTTTGAGCCTTACAAGGACGGTAAAGTTGATCTTCTTGGACCTAAGTTACTGTTTATTGCTCTTAATCTTGGAGGTTTAGCACTGGGTGTTTGGAAGGTGAGTTTCTTTTTAGTTTTTAATCTCTACCTAATAAGTTCTTAACACTTCTTTAATATTTGTTGACCTCTGCTTGATTTTCCTACGTTTCAATTGTGGCTTTTGCAGCTTAACACTTTGGGGCTTCTGCCGACACATGTATCAGACTGGGTTTCATCCTTGCCACCTGCTCAGGTAAGAATCTTACTCCATCTCTCGGCTCTCTGTATTGCATGGGCACGTGCCGGGCTTGTGCATGTGATCTGAACTACTCACTAGTTGCAGAAATGATACTACAACCCTTTTTTTCTTGGCGTTCAATGCTTTAAGTATTTTGATATTGAAACCACTTTTGGGCTCTGTGCCATTGCCTTCGTGGTTTCAAATCTTGTGTTTATCCAGTAGTCTCAAAGCATAGAGTTCTATTTTTAGTTGTAGGTGAAAGTAGCGCAGGTTTAGACATCCTTGTGAATCTATGATATGATTAACTTAGGATAAATTTTCTGTGAAAGGCATACGGAAGACTACTTAACGTATGATGTATTACCATATCCTCGAAATCCATTTGTATGGAAAAATTTCACCGAGTCAATCTTGCTACTGAAACTCATAAGCTGATGAAACATGGACAGAATTGGAATGTGCTTGTTTAACAAAAGAATAGTAAATAGTCATGCCTTTTCATTCACTGAACTCATCGAATTGAAAGGAGTCGCTTGTGCTAAATAGAGTTTTGATCAGTATCAGCACCTCGGAAACTTAATCTCTATGACATTAGTCCTTCAATCCCCTCTACCATTGCTAAAGGTTCATCGTCTTCTTTTTCAGGAGGTCGAATTTTCCGGTGGTGGCATCCCCCTTCGTTAAGACTCCCCCCTGTTTCTTCAGCTACCGACTGTGAAACCGACAGAGGAAATCACGGTGCGACTTCTTGATGATCGAATTGCGTGGGCGGACTGCTTATGTTGTGCTTGAACATGGTATCTATTTATATTACGCCTGCATGGATGGTGCTTGATCAAGAACAATGTTAGAGATGTGCTGAAGGCACGGTTTTATTTTTATTATCATTATTTTTTAAAATGGTACTGAGTTTTTCTTTATTACTAGTTTCAGCCAGTAGAATGTGACTGACTGGTAAAACCAGAACAAAATGCTTTACATGGAGTATGATTAACATTTTGATTTAATGCATTACAAATCTAGCGTAATTCTGGTTGAATATATAGAAGATGGAATTTCTAATATGATGTATAGTATATAATCTAATATCAATTATCGGATTTTTTTAATTAATATCA

mRNA sequence

TTTAATTTTAAAAAATTAGGAACGGAAATTAGAAATTTGAGATATTAAACATTTGGAAAAGTTAGATATTCCCATAGCACAAGGACTTTAATCTCATTGAACTTTCCGGACCATAAGCCTTCAAAAAGGATCTGAATCGTGAAAGTTGAAACACCGGAAGCGACAATCACCACCACCGCATAATTGGAAACAGTATTCGGAATGGAGAAGGGCAAGGGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGACTTCACCGACAATTCTTCATCGTTCTCCACTCGCGATATTACTGATCCTCCCGGTTTCACTCGTGCTTCCCAAGATCAGGACGATTCAACTCTGAGCCGCCAGAAGAAAGATGCTGAATCCAATTGGAAGGCACAGAAAGCTTGGGAAGTGGCGCAGGCTCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTACATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCCCTACAAGGCGTTGGAAAGGTTTTTGAGCCTTACAAGGACGGTAAAGTTGATCTTCTTGGACCTAAGTTACTGTTTATTGCTCTTAATCTTGGAGGTTTAGCACTGGGTGTTTGGAAGCTTAACACTTTGGGGCTTCTGCCGACACATGTATCAGACTGGGTTTCATCCTTGCCACCTGCTCAGGAGGTCGAATTTTCCGGTGGTGGCATCCCCCTTCGTTAAGACTCCCCCCTGTTTCTTCAGCTACCGACTGTGAAACCGACAGAGGAAATCACGGTGCGACTTCTTGATGATCGAATTGCGTGGGCGGACTGCTTATGTTGTGCTTGAACATGGTATCTATTTATATTACGCCTGCATGGATGGTGCTTGATCAAGAACAATGTTAGAGATGTGCTGAAGGCACGGTTTTATTTTTATTATCATTATTTTTTAAAATGGTACTGAGTTTTTCTTTATTACTAGTTTCAGCCAGTAGAATGTGACTGACTGGTAAAACCAGAACAAAATGCTTTACATGGAGTATGATTAACATTTTGATTTAATGCATTACAAATCTAGCGTAATTCTGGTTGAATATATAGAAGATGGAATTTCTAATATGATGTATAGTATATAATCTAATATCAATTATCGGATTTTTTTAATTAATATCA

Coding sequence (CDS)

ATGGAGAAGGGCAAGGGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGACTTCACCGACAATTCTTCATCGTTCTCCACTCGCGATATTACTGATCCTCCCGGTTTCACTCGTGCTTCCCAAGATCAGGACGATTCAACTCTGAGCCGCCAGAAGAAAGATGCTGAATCCAATTGGAAGGCACAGAAAGCTTGGGAAGTGGCGCAGGCTCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTACATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCCCTACAAGGCGTTGGAAAGGTTTTTGAGCCTTACAAGGACGGTAAAGTTGATCTTCTTGGACCTAAGTTACTGTTTATTGCTCTTAATCTTGGAGGTTTAGCACTGGGTGTTTGGAAGCTTAACACTTTGGGGCTTCTGCCGACACATGTATCAGACTGGGTTTCATCCTTGCCACCTGCTCAGGAGGTCGAATTTTCCGGTGGTGGCATCCCCCTTCGTTAA

Protein sequence

MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDGKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR

Homology

[Close]

BLAST of MC11g0392.1 vs. ExPASy Swiss-Prot
Match: Q3T0K8 (ER membrane protein complex subunit 4 OS=Bos taurus OX=9913 GN=EMC4 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-19
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDG 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  +  
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]

BLAST of MC11g0392.1 vs. ExPASy Swiss-Prot
Match: Q5J8M3 (ER membrane protein complex subunit 4 OS=Homo sapiens OX=9606 GN=EMC4 PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-19
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDG 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  +  
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]

BLAST of MC11g0392.1 vs. ExPASy Swiss-Prot
Match: Q9CZX9 (ER membrane protein complex subunit 4 OS=Mus musculus OX=10090 GN=Emc4 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-19
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDG 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  +  
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]

BLAST of MC11g0392.1 vs. ExPASy Swiss-Prot
Match: Q5RC35 (ER membrane protein complex subunit 4 OS=Pongo abelii OX=9601 GN=EMC4 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.0e-19
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDG 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  +  
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG+ L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]

BLAST of MC11g0392.1 vs. ExPASy Swiss-Prot
Match: Q6P011 (ER membrane protein complex subunit 4 OS=Danio rerio OX=7955 GN=emc4 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-18
Identity = 57/171 (33.33%), Postives = 93/171 (54.39%), Query Frame = 0


Query: 13  RWAVDFT-DNSSSFSTR-----DITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQKAWE 72
           +WAV+ +  NS S S R     D+  P G++      D        ++A+ N   ++ W+
Sbjct: 24  KWAVELSLGNSRSRSDRQGKDGDVMYPVGYS------DKPVPDTSVQEADRNLVEKRCWD 83

Query: 73  VAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDGKVDLL 132
           VA  PLK + M  F+M+M+G+T+ +F I +     W+PI AL  +   F+  +      L
Sbjct: 84  VALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLESSSQQWL 143

Query: 133 GPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGI 178
              L+++  NL G AL ++K  ++GLLPTH SDW++ + P Q +E  GGG+
Sbjct: 144 -QGLVYLIGNLLGSALAIYKCQSMGLLPTHSSDWLAFIEPPQRLEIMGGGM 187

[Close]

BLAST of MC11g0392.1 vs. NCBI nr
Match: XP_022142789.1 (ER membrane protein complex subunit 4 [Momordica charantia])

HSP 1 Score: 365 bits (937), Expect = 2.11e-127
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
           GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR
Sbjct: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180

[Close]

BLAST of MC11g0392.1 vs. NCBI nr
Match: XP_022941437.1 (ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_022982038.1 ER membrane protein complex subunit 4-like [Cucurbita maxima] >XP_023524401.1 ER membrane protein complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG7037662.1 ER membrane protein complex subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353 bits (906), Expect = 1.13e-122
Identity = 174/180 (96.67%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFTDNSSS STRDI DPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
            KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGG PLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180

[Close]

BLAST of MC11g0392.1 vs. NCBI nr
Match: XP_022935895.1 (ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_023535009.1 ER membrane protein complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG6591518.1 ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024405.1 ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353 bits (905), Expect = 1.60e-122
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDF+DNSSS STRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
            KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGI LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of MC11g0392.1 vs. NCBI nr
Match: XP_008452824.1 (PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo])

HSP 1 Score: 352 bits (904), Expect = 2.28e-122
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDF+DNSSS STRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
            KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGI LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of MC11g0392.1 vs. NCBI nr
Match: XP_004145491.1 (ER membrane protein complex subunit 4 [Cucumis sativus] >KGN55415.1 hypothetical protein Csa_012491 [Cucumis sativus])

HSP 1 Score: 350 bits (897), Expect = 2.66e-121
Identity = 173/180 (96.11%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDF+DNSSS STRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
            KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGGI LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of MC11g0392.1 vs. ExPASy TrEMBL
Match: A0A6J1CMH7 (ER membrane protein complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC111012825 PE=3 SV=1)

HSP 1 Score: 365 bits (937), Expect = 1.02e-127
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
           GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR
Sbjct: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180

[Close]

BLAST of MC11g0392.1 vs. ExPASy TrEMBL
Match: A0A6J1J3R8 (ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111481007 PE=3 SV=1)

HSP 1 Score: 353 bits (906), Expect = 5.46e-123
Identity = 174/180 (96.67%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFTDNSSS STRDI DPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
            KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGG PLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180

[Close]

BLAST of MC11g0392.1 vs. ExPASy TrEMBL
Match: A0A6J1FMF6 (ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111446731 PE=3 SV=1)

HSP 1 Score: 353 bits (906), Expect = 5.46e-123
Identity = 174/180 (96.67%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDFTDNSSS STRDI DPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
            KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGG PLR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180

[Close]

BLAST of MC11g0392.1 vs. ExPASy TrEMBL
Match: A0A6J1FBZ1 (ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111442661 PE=3 SV=1)

HSP 1 Score: 353 bits (905), Expect = 7.76e-123
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDF+DNSSS STRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
            KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGI LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of MC11g0392.1 vs. ExPASy TrEMBL
Match: A0A1S3BUR2 (ER membrane protein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103493734 PE=3 SV=1)

HSP 1 Score: 352 bits (904), Expect = 1.10e-122
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDF+DNSSS STRDI DPPGFTRASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGIPLR 180
            KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGI LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]

BLAST of MC11g0392.1 vs. TAIR 10
Match: AT5G10780.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 292.4 bits (747), Expect = 2.6e-79
Identity = 141/176 (80.11%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           M+KGK +M  GRRWAV+F+D S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK
Sbjct: 1   MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            QKAWEVAQ+P KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct: 61  LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGG 177
            KV+LL PKL+F+ALNLGGLALGVWKLNTLGLLPTH SDWVSSLPP QEVE SGGG
Sbjct: 121 NKVELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPPQEVEHSGGG 176

[Close]

BLAST of MC11g0392.1 vs. TAIR 10
Match: AT5G10780.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). )

HSP 1 Score: 278.5 bits (711), Expect = 3.8e-75
Identity = 134/168 (79.76%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSFSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWK 60
           M+KGK +M  GRRWAV+F+D S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK
Sbjct: 1   MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            QKAWEVAQ+P KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct: 61  LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query: 121 GKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQ 169
            KV+LL PKL+F+ALNLGGLALGVWKLNTLGLLPTH SDWVSSLPP Q
Sbjct: 121 NKVELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPPQ 168

The following BLAST results are available for this feature:

BLAST of MC11g0392.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T0K8	5.0e-19	38.98	ER membrane protein complex subunit 4 OS=Bos taurus OX=9913 GN=EMC4 PE=2 SV=1	[more]
Q5J8M3	5.0e-19	38.98	ER membrane protein complex subunit 4 OS=Homo sapiens OX=9606 GN=EMC4 PE=1 SV=2	[more]
Q9CZX9	5.0e-19	38.98	ER membrane protein complex subunit 4 OS=Mus musculus OX=10090 GN=Emc4 PE=1 SV=1	[more]
Q5RC35	5.0e-19	38.98	ER membrane protein complex subunit 4 OS=Pongo abelii OX=9601 GN=EMC4 PE=2 SV=1	[more]
Q6P011	2.5e-18	33.33	ER membrane protein complex subunit 4 OS=Danio rerio OX=7955 GN=emc4 PE=2 SV=1	[more]

BLAST of MC11g0392.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142789.1	2.11e-127	100.00	ER membrane protein complex subunit 4 [Momordica charantia]	[more]
XP_022941437.1	1.13e-122	96.67	ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_022982038.1 ...	[more]
XP_022935895.1	1.60e-122	97.22	ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_023535009.1 ...	[more]
XP_008452824.1	2.28e-122	97.22	PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo]	[more]
XP_004145491.1	2.66e-121	96.11	ER membrane protein complex subunit 4 [Cucumis sativus] >KGN55415.1 hypothetical...	[more]

BLAST of MC11g0392.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMH7	1.02e-127	100.00	ER membrane protein complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1J3R8	5.46e-123	96.67	ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC11148100...	[more]
A0A6J1FMF6	5.46e-123	96.67	ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111446...	[more]
A0A6J1FBZ1	7.76e-123	97.22	ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]
A0A1S3BUR2	1.10e-122	97.22	ER membrane protein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103493734 PE...	[more]

BLAST of MC11g0392.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10780.1	2.6e-79	80.11	CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transme...	[more]
AT5G10780.2	3.8e-75	79.76	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009445	TMEM85/ER membrane protein complex subunit 4	PIRSF	PIRSF017207	UCP017207_Tmem85	coord: 1..177 e-value: 9.9E-52 score: 172.9
IPR009445	TMEM85/ER membrane protein complex subunit 4	PFAM	PF06417	DUF1077	coord: 52..164 e-value: 4.4E-38 score: 129.9
IPR009445	TMEM85/ER membrane protein complex subunit 4	PANTHER	PTHR19315	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4	coord: 8..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..57

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0392	MC11g0392	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0392.1-utr5	MC11g0392.1-utr5-MC11:3099394..3099594	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0392.1-cds	MC11g0392.1-cds-MC11:3099595..3099780	CDS
MC11g0392.1-cds	MC11g0392.1-cds-MC11:3100397..3100550	CDS
MC11g0392.1-cds	MC11g0392.1-cds-MC11:3101101..3101198	CDS
MC11g0392.1-cds	MC11g0392.1-cds-MC11:3101307..3101372	CDS
MC11g0392.1-cds	MC11g0392.1-cds-MC11:3102006..3102044	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0392.1-utr3	MC11g0392.1-utr3-MC11:3102045..3102478	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0392.1	MC11g0392.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0072546	EMC complex