MC11g0219.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0219.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	calmodulin-like
Location	MC11: 1739033 .. 1739296 (-)
Sequence length	264
RNA-Seq Expression	MC11g0219.1
Synteny	MC11g0219.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAGATCTTCAGAAACCACGACCGCGACGGCGACGGGTGCCTCAACGCCAACGAGCTCACCGAAGCCTTCCGCTACATCGGCTCACTTCTCCCCTCCTACAGAGCTTCCCACGCCCTCTTCCACACCGATTCCGATAGAGATGGATTCATCAGCGAGACAGATTTCGAATCTCTCGTTACTTATACCGAGAAACGTAAATATGCCATCATT

mRNA sequence

ATGGGTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAGATCTTCAGAAACCACGACCGCGACGGCGACGGGTGCCTCAACGCCAACGAGCTCACCGAAGCCTTCCGCTACATCGGCTCACTTCTCCCCTCCTACAGAGCTTCCCACGCCCTCTTCCACACCGATTCCGATAGAGATGGATTCATCAGCGAGACAGATTTCGAATCTCTCGTTACTTATACCGAGAAACGTAAATATGCCATCATT

Coding sequence (CDS)

ATGGGTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAGATCTTCAGAAACCACGACCGCGACGGCGACGGGTGCCTCAACGCCAACGAGCTCACCGAAGCCTTCCGCTACATCGGCTCACTTCTCCCCTCCTACAGAGCTTCCCACGCCCTCTTCCACACCGATTCCGATAGAGATGGATTCATCAGCGAGACAGATTTCGAATCTCTCGTTACTTATACCGAGAAACGTAAATATGCCATCATT

Protein sequence

MGRKGKQYRPKLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISETDFESLVTYTEKRKYAII

Homology

[Close]

BLAST of MC11g0219.1 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-05
Identity = 25/66 (37.88%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 13  SREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISETD 72
           S+E+L Q+F + D DGDG ++A EL   F  +G  +    A  A+   D+D DG +   D
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 73  FESLVT 79
           F  L+T
Sbjct: 121 FVGLMT 126

[Close]

BLAST of MC11g0219.1 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.4e-05
Identity = 22/58 (37.93%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 16 QLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISETDF 74
          +L Q+FR +D +GDG ++A EL    R +G+ L        +   DSDRDGF+  ++F
Sbjct: 5  ELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEF 62

[Close]

BLAST of MC11g0219.1 vs. ExPASy Swiss-Prot
Match: Q9S744 (Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.8e-05
Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 15  EQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISETDFE 74
           ++L ++FR  DRDGDG ++  EL E  + +G  + +  A H +   D D DGF+S  +F 
Sbjct: 84  DELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFS 143

Query: 75  SLV 78
            ++
Sbjct: 144 KMM 146

[Close]

BLAST of MC11g0219.1 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-04
Identity = 23/60 (38.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 14 REQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISETDF 73
          + +  +IF+  D +GDG ++A EL EA + +GS+ P     H +   D+D DGFIS  +F
Sbjct: 9  KAERERIFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISFQEF 67

[Close]

BLAST of MC11g0219.1 vs. ExPASy Swiss-Prot
Match: Q9LI84 (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-04
Identity = 22/66 (33.33%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 12  LSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISET 71
           +++EQL ++FR+ DRDG+G + A EL  +   +G  L     +  +   DS+ DG IS  
Sbjct: 83  INQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEMMTEADSNGDGVISFN 142

Query: 72  DFESLV 78
           +F  ++
Sbjct: 143 EFSHIM 148

[Close]

BLAST of MC11g0219.1 vs. NCBI nr
Match: KAG6608481.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1 putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132 bits (333), Expect = 3.20e-38
Identity = 69/90 (76.67%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1  MGRKGK--QYRPKLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALF 60
          M RK K  Q RPKLSREQLS IFRNHD DGDG L+A ELTEAFRYIG+ LPSYRA HAL 
Sbjct: 1  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALR 60

Query: 61 HTDSDRDGFISETDFESLVTYTEKRKYAII 88
          +TDSDRDGFI E DFESLV YTEKR Y I+
Sbjct: 61 YTDSDRDGFIGEKDFESLVNYTEKRHYTIV 90

[Close]

BLAST of MC11g0219.1 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129 bits (323), Expect = 1.07e-36
Identity = 66/90 (73.33%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 1  MGRKGKQY--RPKLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALF 60
          M RK K Y  RPKLSREQLS IFRNHD DGDG L+  ELT AFRYIG+ LPSYRA HAL 
Sbjct: 1  MARKSKTYQPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHALL 60

Query: 61 HTDSDRDGFISETDFESLVTYTEKRKYAII 88
          HTDSD DGFI E DFE LV Y EKRKY +I
Sbjct: 61 HTDSDGDGFIGEKDFELLVNYAEKRKYTVI 90

[Close]

BLAST of MC11g0219.1 vs. NCBI nr
Match: KAG6600743.1 (Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031384.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124 bits (311), Expect = 7.22e-35
Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1  MGRKGKQY--RPKLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALF 60
          M RK K Y  RPK+SR+QL  IFRNHDRDGDG L++ ELT+AF YIG+LLPS+RA HAL 
Sbjct: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60

Query: 61 HTDSDRDGFISETDFESLVTYTEKRKYAII 88
          +TDSDRDGFI E DFE L+ Y EKR+Y +I
Sbjct: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90

[Close]

BLAST of MC11g0219.1 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126 bits (316), Expect = 1.18e-34
Identity = 65/87 (74.71%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1  MGRKGKQY--RPKLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALF 60
          M RK K Y  RPKLSREQLS IFRNHD DGDG L+  ELT AFRYIG+ LPSYRA HAL 
Sbjct: 1  MARKSKTYQPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHALL 60

Query: 61 HTDSDRDGFISETDFESLVTYTEKRKY 85
          HTDSD DGFI E DFE LV Y EKRKY
Sbjct: 61 HTDSDGDGFIGEKDFELLVNYAEKRKY 87

[Close]

BLAST of MC11g0219.1 vs. NCBI nr
Match: KGN55185.1 (hypothetical protein Csa_012915 [Cucumis sativus])

HSP 1 Score: 123 bits (309), Expect = 1.46e-34
Identity = 63/90 (70.00%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1  MGRKGKQYRP--KLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALF 60
          M RK K Y P  KLSREQL  IFRNHD D DG L+  ELTEAFRYIG+ LP+YRA HAL 
Sbjct: 1  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALL 60

Query: 61 HTDSDRDGFISETDFESLVTYTEKRKYAII 88
          H DSDRDGFI E DFESLV Y E+R+Y II
Sbjct: 61 HADSDRDGFIGEKDFESLVNYAEQRQYTII 90

[Close]

BLAST of MC11g0219.1 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1)

HSP 1 Score: 123 bits (309), Expect = 7.06e-35
Identity = 63/90 (70.00%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1  MGRKGKQYRP--KLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALF 60
          M RK K Y P  KLSREQL  IFRNHD D DG L+  ELTEAFRYIG+ LP+YRA HAL 
Sbjct: 1  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALL 60

Query: 61 HTDSDRDGFISETDFESLVTYTEKRKYAII 88
          H DSDRDGFI E DFESLV Y E+R+Y II
Sbjct: 61 HADSDRDGFIGEKDFESLVNYAEQRQYTII 90

[Close]

BLAST of MC11g0219.1 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 2.87e-34
Identity = 61/90 (67.78%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1  MGRKGKQYRPK--LSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALF 60
          M R+ K Y P+  LSREQL  IFRNHD D DG L+  ELTEAFRYIG+ LP YRA HALF
Sbjct: 1  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALF 60

Query: 61 HTDSDRDGFISETDFESLVTYTEKRKYAII 88
          H DSDRDGFISE DFE LV Y E+R+Y +I
Sbjct: 61 HADSDRDGFISEKDFELLVNYAEQRQYTVI 90

[Close]

BLAST of MC11g0219.1 vs. ExPASy TrEMBL
Match: A0A803LVB7 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.81e-18
Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 11 KLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISE 70
          +LS +QL +IF+ HD++GDGCL+  EL EAFR +G+ +P YRA +A+ +TD D DG I+E
Sbjct: 23 RLSEDQLRRIFKAHDKNGDGCLDKEELKEAFRALGARVPGYRADYAIHYTDIDLDGVINE 82

Query: 71 TDFESLVTYTEKRKYAI 87
           + + LV+Y  +  Y +
Sbjct: 83 NEIDHLVSYAIQFGYTL 99

[Close]

BLAST of MC11g0219.1 vs. ExPASy TrEMBL
Match: A0A803MSM1 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.81e-18
Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 11 KLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISE 70
          +LS +QL +IF+ HD++GDGCL+  EL EAFR +G+ +P YRA +A+ +TD D DG I+E
Sbjct: 23 RLSEDQLRRIFKAHDKNGDGCLDKEELKEAFRALGARVPGYRADYAIHYTDIDLDGVINE 82

Query: 71 TDFESLVTYTEKRKYAI 87
           + + LV+Y  +  Y +
Sbjct: 83 NEIDHLVSYAIQFGYTL 99

[Close]

BLAST of MC11g0219.1 vs. ExPASy TrEMBL
Match: A0A803LKC8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.57e-18
Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 11 KLSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISE 70
          +LS +QL +IF+ HD++GDGCL+  EL EAFR +G+ +P YRA +A+ +TD D DG I+E
Sbjct: 23 RLSEDQLRRIFKAHDKNGDGCLDKEELKEAFRALGARVPGYRADYAIHYTDIDLDGVINE 82

Query: 71 TDFESLVTYTEKRKYAI 87
           + + LV+Y  +  Y +
Sbjct: 83 DEIDHLVSYAIQFGYTL 99

[Close]

BLAST of MC11g0219.1 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 50.4 bits (119), Expect = 8.3e-07
Identity = 25/66 (37.88%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 13  SREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISETD 72
           S+E+L Q+F + D DGDG ++A EL   F  +G  +    A  A+   D+D DG +   D
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 73  FESLVT 79
           F  L+T
Sbjct: 121 FVGLMT 126

[Close]

BLAST of MC11g0219.1 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 48.1 bits (113), Expect = 4.1e-06
Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 15  EQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISETDFE 74
           ++L ++FR  DRDGDG ++  EL E  + +G  + +  A H +   D D DGF+S  +F 
Sbjct: 84  DELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFS 143

Query: 75  SLV 78
            ++
Sbjct: 144 KMM 146

[Close]

BLAST of MC11g0219.1 vs. TAIR 10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05
Identity = 22/66 (33.33%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 12  LSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISET 71
           +++EQL ++FR+ DRDG+G + A EL  +   +G  L     +  +   DS+ DG IS  
Sbjct: 83  INQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEMMTEADSNGDGVISFN 142

Query: 72  DFESLV 78
           +F  ++
Sbjct: 143 EFSHIM 148

[Close]

BLAST of MC11g0219.1 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 44.7 bits (104), Expect = 4.6e-05
Identity = 23/66 (34.85%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 12  LSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISET 71
           ++ EQL +IF++ DRDG+G ++A EL  A   +G  L     +  +   D++ DG IS  
Sbjct: 78  INSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVISFG 137

Query: 72  DFESLV 78
           +F S++
Sbjct: 138 EFASIM 143

[Close]

BLAST of MC11g0219.1 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 43.9 bits (102), Expect = 7.8e-05
Identity = 20/65 (30.77%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 12 LSREQLSQIFRNHDRDGDGCLNANELTEAFRYIGSLLPSYRASHALFHTDSDRDGFISET 71
          + R +LS++F+  D++GDG +  NEL + F+ +G ++P    +  +   D + DG +   
Sbjct: 1  MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 72 DFESL 77
          +F SL
Sbjct: 61 EFGSL 65

The following BLAST results are available for this feature:

BLAST of MC11g0219.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3R2	1.2e-05	37.88	Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 ...	[more]
Q0DJV6	3.4e-05	37.93	Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9S744	5.8e-05	34.92	Calmodulin-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=CML9 PE=1 SV=1	[more]
Q39419	1.3e-04	38.33	Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1	[more]
Q9LI84	2.9e-04	33.33	Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 ...	[more]

BLAST of MC11g0219.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6608481.1	3.20e-38	76.67	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1...	[more]
KAG7024248.1	1.07e-36	73.33	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600743.1	7.22e-35	67.78	Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
KAG6591370.1	1.18e-34	74.71	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KGN55185.1	1.46e-34	70.00	hypothetical protein Csa_012915 [Cucumis sativus]	[more]

BLAST of MC11g0219.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZR6	7.06e-35	70.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1	[more]
A0A5A7VDB9	2.87e-34	67.78	Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A803LVB7	1.81e-18	46.75	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]
A0A803MSM1	1.81e-18	46.75	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]
A0A803LKC8	2.57e-18	46.75	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]

BLAST of MC11g0219.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50770.1	8.3e-07	37.88	calmodulin-like 41	[more]
AT3G51920.1	4.1e-06	34.92	calmodulin 9	[more]
AT3G25600.1	2.0e-05	33.33	Calcium-binding EF-hand family protein	[more]
AT1G18530.1	4.6e-05	34.85	EF hand calcium-binding protein family	[more]
AT4G12860.1	7.8e-05	30.77	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 2..85 e-value: 4.8E-12 score: 48.1
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 11..82
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 11..82
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 15..77 e-value: 5.2E-9 score: 36.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 12..47 score: 13.648647
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 25..37
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 61..73
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 8..78

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0219	MC11g0219	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0219.1-cds	MC11g0219.1-cds-MC11:1739033..1739296	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0219.1	MC11g0219.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding