MC11g0119.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0119.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Auxin responsive SAUR protein
Location	MC11: 844736 .. 845185 (-)
Sequence length	450
RNA-Seq Expression	MC11g0119.1
Synteny	MC11g0119.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCCGGATTCGGAAAATGCAGCAAAATCCGGCACATTGTCCGGCTCCGCCAAATGCTCCGAAGGTGGCGCAACAAGGCCCGTATGTCCGCCAACCGCATCCCCTCCGACGTCCCCGCCGGCCACGTAGCCGTCTGCGTCGGAACCAGCTGCCGGCGGTTCGTCGTCCGGGCGACCTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTCCAAGCCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCCATCCCCTGCGACGAGTCGGTCTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGACCAACTCGGGCCGGTTCGGGAATCTGGACGATTTCCAGAGATACTGCCACATCGGAATCAGAACCGGTCTGGATTTATGGCCGGAATCCCGACCTCTGCTTCATGGGTTGGCCGAGAAATCCATCTGG

mRNA sequence

ATGTCGGCCGGATTCGGAAAATGCAGCAAAATCCGGCACATTGTCCGGCTCCGCCAAATGCTCCGAAGGTGGCGCAACAAGGCCCGTATGTCCGCCAACCGCATCCCCTCCGACGTCCCCGCCGGCCACGTAGCCGTCTGCGTCGGAACCAGCTGCCGGCGGTTCGTCGTCCGGGCGACCTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTCCAAGCCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCCATCCCCTGCGACGAGTCGGTCTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGACCAACTCGGGCCGGTTCGGGAATCTGGACGATTTCCAGAGATACTGCCACATCGGAATCAGAACCGGTCTGGATTTATGGCCGGAATCCCGACCTCTGCTTCATGGGTTGGCCGAGAAATCCATCTGG

Coding sequence (CDS)

ATGTCGGCCGGATTCGGAAAATGCAGCAAAATCCGGCACATTGTCCGGCTCCGCCAAATGCTCCGAAGGTGGCGCAACAAGGCCCGTATGTCCGCCAACCGCATCCCCTCCGACGTCCCCGCCGGCCACGTAGCCGTCTGCGTCGGAACCAGCTGCCGGCGGTTCGTCGTCCGGGCGACCTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTCCAAGCCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCCATCCCCTGCGACGAGTCGGTCTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGACCAACTCGGGCCGGTTCGGGAATCTGGACGATTTCCAGAGATACTGCCACATCGGAATCAGAACCGGTCTGGATTTATGGCCGGAATCCCGACCTCTGCTTCATGGGTTGGCCGAGAAATCCATCTGG

Protein sequence

MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW

Homology

[Close]

BLAST of MC11g0119.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.4e-13
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 7   KCSKIRHIVRLRQMLRRW-----RNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATY 66
           K SK+     L+Q+L+R      +N      + +P DVP GH  V VG +  R++V  ++
Sbjct: 6   KTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISF 65

Query: 67  LNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFI 103
           L HP F+ LL +AEEE+GF +   L IPCDE VF+ +   I
Sbjct: 66  LTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]

BLAST of MC11g0119.1 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.9e-13
Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 35  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESV 94
           + S VP+GHV V VG    RFVV A  LNHPVF  LL ++ +EYG+T +G L IPC+  V
Sbjct: 44  VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFV 103

Query: 95  FEEVIRFISRSESTNSG 112
           FE+V+      ES  SG
Sbjct: 104 FEQVV------ESLRSG 114

[Close]

BLAST of MC11g0119.1 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 20  MLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYG 79
           +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL Q+ +EYG
Sbjct: 19  LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYG 78

Query: 80  FTNQGPLAIPCDESVFEEVI 100
           +  QG L IPC   VFE ++
Sbjct: 79  YEQQGVLRIPCHVLVFERIL 98

[Close]

BLAST of MC11g0119.1 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 27  KARMSANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTN- 86
           KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL QAEEE+G+ + 
Sbjct: 10  KASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHP 69

Query: 87  QGPLAIPCDESVFEEVIRFIS 104
            G L IPC E VF+ +  F++
Sbjct: 70  NGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of MC11g0119.1 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.7e-12
Identity = 36/78 (46.15%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 39  VPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEV 98
           VPAGHV V VG    RFVV A  +NHP+F  LL ++ +EYG+  +G L IPC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 99  IRFISRSESTNSGRFGNL 117
           +  +       SG   NL
Sbjct: 114 VETLRLGGFEGSGDLENL 131

[Close]

BLAST of MC11g0119.1 vs. NCBI nr
Match: XP_022138000.1 (auxin-induced protein 6B-like [Momordica charantia])

HSP 1 Score: 313 bits (801), Expect = 1.19e-107
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
           RYCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. NCBI nr
Match: XP_038899268.1 (auxin-induced protein 6B-like [Benincasa hispida])

HSP 1 Score: 298 bits (763), Expect = 7.47e-102
Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHP+FKKLLVQAEEEYGFTNQGPLAIPC+ESVFEEVIRFISRSES NSGRF  LDDFQ
Sbjct: 61  YLNHPIFKKLLVQAEEEYGFTNQGPLAIPCEESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
            YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. NCBI nr
Match: XP_022936801.1 (auxin-induced protein 6B [Cucurbita moschata] >KAG6591279.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297 bits (761), Expect = 1.51e-101
Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRS+S NSGRF  LD+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
            YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. NCBI nr
Match: XP_023535898.1 (auxin-induced protein 6B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297 bits (760), Expect = 2.14e-101
Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGVGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRS+S NSGRF  LD+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
            YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. NCBI nr
Match: XP_011652445.1 (auxin-induced protein 6B [Cucumis sativus])

HSP 1 Score: 296 bits (758), Expect = 4.33e-101
Identity = 144/150 (96.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSES NSGRF  LDDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
            YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. ExPASy TrEMBL
Match: A0A6J1C879 (auxin-induced protein 6B-like OS=Momordica charantia OX=3673 GN=LOC111009266 PE=3 SV=1)

HSP 1 Score: 313 bits (801), Expect = 5.78e-108
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
           RYCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. ExPASy TrEMBL
Match: A0A6J1F8H9 (auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1)

HSP 1 Score: 297 bits (761), Expect = 7.30e-102
Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRS+S NSGRF  LD+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
            YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. ExPASy TrEMBL
Match: A0A5D3E601 (Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008210 PE=3 SV=1)

HSP 1 Score: 296 bits (757), Expect = 2.98e-101
Identity = 143/150 (95.33%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSES NSGRF  LDDFQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
            YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. ExPASy TrEMBL
Match: A0A1S3CRK3 (auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1)

HSP 1 Score: 296 bits (757), Expect = 2.98e-101
Identity = 143/150 (95.33%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSES NSGRF  LDDFQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
            YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. ExPASy TrEMBL
Match: A0A6J1IP24 (auxin-induced protein 6B OS=Cucurbita maxima OX=3661 GN=LOC111476970 PE=3 SV=1)

HSP 1 Score: 294 bits (752), Expect = 1.72e-100
Identity = 141/150 (94.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRA 
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAA 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRS+S NSGRF  LD+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
            +CHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TFCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of MC11g0119.1 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 237.7 bits (605), Expect = 6.3e-63
Identity = 114/154 (74.03%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSAN---RIPSDVPAGHVAVCVGTSCRRFVV 60
           M+ G GKCSKIRHIVRLRQMLRRWR++ARMS++    +PSDVP+GHVAV VG+SCRRFVV
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLD 120
           RATYLNHPV + LLVQAEEE+GF NQGPL IPC+ESVFEE IRFISRS+ST S RF   D
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DFQRYCH-IGIRTGLDLWPESRPLLHGLAEKSIW 151
           DFQ+ CH +GIR+ LDLW ESRPLLHG+ EK++W
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAVW 154

[Close]

BLAST of MC11g0119.1 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 218.4 bits (555), Expect = 3.9e-57
Identity = 108/154 (70.13%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMS--ANRIPSDVPAGHVAVCVGTSCRRFVVR 60
           M+    KCSKIRHIVRLRQMLRRWRNKAR+S  +  +PSDVP+GHVAVCVG+ CRRFVVR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDD 120
           A+YLNHP+   LLVQAEEE+GF NQGPL IPC+ESVFEE IRFISRS+S+ S RF   DD
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 FQRYCH--IGIRTGLDLWPESRPLLHGLAEKSIW 151
            Q+ C+  I I++ LDL  ESRPLLHG+AEK+IW
Sbjct: 121 LQK-CNGGIKIKSKLDLMIESRPLLHGVAEKAIW 153

[Close]

BLAST of MC11g0119.1 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 207.6 bits (527), Expect = 6.9e-54
Identity = 104/151 (68.87%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANR--IPSDVPAGHVAVCVGTSCRRFVVR 60
           M+ G GKCSKIRHIV+LRQMLR+WRNKARMS+ R  +PSDVP+GHVAV VG SCRRFVV 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDD 120
           ATYLNHP+   LLV+AEEE+GF NQGPL IPC+ESVFEE IRFI+R     S RF   DD
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 FQRYCHIGIRTGLDLWPESRPLLHGLAEKSI 150
            ++  H GIR+ LDL  ESRPLLHG++EK+I
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEKAI 146

[Close]

BLAST of MC11g0119.1 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 161.4 bits (407), Expect = 5.7e-40
Identity = 83/151 (54.97%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 6   GKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLN 65
           GK +KI  +VR+RQML++W+ KA + S+N  P SDVP GHVAV VG + RR+VVRA +LN
Sbjct: 2   GKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLN 61

Query: 66  HPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGN-----LDD 125
           HP+F++LL +AEEEYGF N GPLAIPCDES+FE++I  ++R ES++S   GN     L+D
Sbjct: 62  HPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLED 121

Query: 126 FQRYCHIGIRTGLDLWPESRPLLHGLAEKSI 150
            +R  H+G+        ESRPLL G+AEKS+
Sbjct: 122 LRRCSHVGLAKNN---VESRPLLPGIAEKSV 149

[Close]

BLAST of MC11g0119.1 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 161.4 bits (407), Expect = 5.7e-40
Identity = 83/151 (54.97%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 6   GKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLN 65
           GK +KI  +VR+RQML++W+ KA + S+N  P SDVP GHVAV VG + RR+VVRA +LN
Sbjct: 2   GKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLN 61

Query: 66  HPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGN-----LDD 125
           HP+F++LL +AEEEYGF N GPLAIPCDES+FE++I  ++R ES++S   GN     L+D
Sbjct: 62  HPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLED 121

Query: 126 FQRYCHIGIRTGLDLWPESRPLLHGLAEKSI 150
            +R  H+G+        ESRPLL G+AEKS+
Sbjct: 122 LRRCSHVGLAKNN---VESRPLLPGIAEKSV 149

The following BLAST results are available for this feature:

BLAST of MC11g0119.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	4.4e-13	39.60	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
O64538	9.9e-13	50.65	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
Q9SGU2	1.3e-12	47.50	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
P33083	1.7e-12	48.15	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9SA49	3.7e-12	46.15	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]

BLAST of MC11g0119.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138000.1	1.19e-107	100.00	auxin-induced protein 6B-like [Momordica charantia]	[more]
XP_038899268.1	7.47e-102	95.33	auxin-induced protein 6B-like [Benincasa hispida]	[more]
XP_022936801.1	1.51e-101	95.33	auxin-induced protein 6B [Cucurbita moschata] >KAG6591279.1 Auxin-responsive pro...	[more]
XP_023535898.1	2.14e-101	95.33	auxin-induced protein 6B [Cucurbita pepo subsp. pepo]	[more]
XP_011652445.1	4.33e-101	96.00	auxin-induced protein 6B [Cucumis sativus]	[more]

BLAST of MC11g0119.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C879	5.78e-108	100.00	auxin-induced protein 6B-like OS=Momordica charantia OX=3673 GN=LOC111009266 PE=...	[more]
A0A6J1F8H9	7.30e-102	95.33	auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1	[more]
A0A5D3E601	2.98e-101	95.33	Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRK3	2.98e-101	95.33	auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1	[more]
A0A6J1IP24	1.72e-100	94.00	auxin-induced protein 6B OS=Cucurbita maxima OX=3661 GN=LOC111476970 PE=3 SV=1	[more]

BLAST of MC11g0119.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75590.1	6.3e-63	74.03	SAUR-like auxin-responsive protein family	[more]
AT1G19840.1	3.9e-57	70.13	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	6.9e-54	68.87	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	5.7e-40	54.97	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	5.7e-40	54.97	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..101 e-value: 8.2E-31 score: 106.0
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..143
None	No IPR available	PANTHER	PTHR31374:SF183	SMALL AUXIN-UP RNA-RELATED	coord: 6..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0119	MC11g0119	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0119.1-cds	MC11g0119.1-cds-MC11:844736..845185	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0119.1	MC11g0119.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin