MC11g0078.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0078.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Plastocyanin
Location	MC11: 588645 .. 589145 (-)
Sequence length	501
RNA-Seq Expression	MC11g0078.1
Synteny	MC11g0078.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGTCACCTCCGCCGCCGTCGCAATTCCCTCCTTCACCGGCCTTAAATCCTCCGGCGCCTCCAGAGCAGCCACCGCCGCCGTCAGAGTCTCAGCCCCCGCCGCCGGAAAGCTCTGCGTCAGGGCCTCTCTGAAGGACCTCGGCGTGGCGGTTGCCGCCACCGCCGCAAGCGCGATTCTGGCCACCAGCGCATTGGCGATCGAGGTCAAGCTCGGTGGCGACGACGGATCTCTGGCGTTCGTCCCGAACGATTTCTCGATTTCGTCCGGCGACAAAATCGTCTTCAAGAACAACGCCGGGTTCCCGCACAACGTGGTGTTTGATGAGGACGAAATCCCGAGCGGAGTGGACGCCGGGAAAATCTCGATGAGCGAAGAAGATCTGCTGAATGCTCCCGGCGAGATCTACGAAGTGCAGCTGACGGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCGCATCAAGGTGCCGGAATGGTCGGAAAAGTCACCGTTAAC

mRNA sequence

ATGGCCGCCGTCACCTCCGCCGCCGTCGCAATTCCCTCCTTCACCGGCCTTAAATCCTCCGGCGCCTCCAGAGCAGCCACCGCCGCCGTCAGAGTCTCAGCCCCCGCCGCCGGAAAGCTCTGCGTCAGGGCCTCTCTGAAGGACCTCGGCGTGGCGGTTGCCGCCACCGCCGCAAGCGCGATTCTGGCCACCAGCGCATTGGCGATCGAGGTCAAGCTCGGTGGCGACGACGGATCTCTGGCGTTCGTCCCGAACGATTTCTCGATTTCGTCCGGCGACAAAATCGTCTTCAAGAACAACGCCGGGTTCCCGCACAACGTGGTGTTTGATGAGGACGAAATCCCGAGCGGAGTGGACGCCGGGAAAATCTCGATGAGCGAAGAAGATCTGCTGAATGCTCCCGGCGAGATCTACGAAGTGCAGCTGACGGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCGCATCAAGGTGCCGGAATGGTCGGAAAAGTCACCGTTAAC

Coding sequence (CDS)

ATGGCCGCCGTCACCTCCGCCGCCGTCGCAATTCCCTCCTTCACCGGCCTTAAATCCTCCGGCGCCTCCAGAGCAGCCACCGCCGCCGTCAGAGTCTCAGCCCCCGCCGCCGGAAAGCTCTGCGTCAGGGCCTCTCTGAAGGACCTCGGCGTGGCGGTTGCCGCCACCGCCGCAAGCGCGATTCTGGCCACCAGCGCATTGGCGATCGAGGTCAAGCTCGGTGGCGACGACGGATCTCTGGCGTTCGTCCCGAACGATTTCTCGATTTCGTCCGGCGACAAAATCGTCTTCAAGAACAACGCCGGGTTCCCGCACAACGTGGTGTTTGATGAGGACGAAATCCCGAGCGGAGTGGACGCCGGGAAAATCTCGATGAGCGAAGAAGATCTGCTGAATGCTCCCGGCGAGATCTACGAAGTGCAGCTGACGGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCGCATCAAGGTGCCGGAATGGTCGGAAAAGTCACCGTTAAC

Protein sequence

MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASAILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN

Homology

[Close]

BLAST of MC11g0078.1 vs. ExPASy Swiss-Prot
Match: P17340 (Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.8e-59
Identity = 123/170 (72.35%), Postives = 147/170 (86.47%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLK--SSGASRAAT-AAVRVSAPAAGKLCVRASLKDLGVAVAATA 60
           MA VTSAAVAIPSFTGLK  +S +SR +T A+ +V+A    +L V+ASLKD+G  VAATA
Sbjct: 1   MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60

Query: 61  ASAILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSG 120
            SA+LA++A+A+EV LGGDDGSLAF+P +FS+S+G+KI FKNNAGFPHNVVFDEDEIP+G
Sbjct: 61  VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120

Query: 121 VDAGKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           VDA KISMSEEDLLNA GE Y V L+EKG+Y+FYC+PHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of MC11g0078.1 vs. ExPASy Swiss-Prot
Match: P00299 (Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 227.6 bits (579), Expect = 1.0e-58
Identity = 122/168 (72.62%), Postives = 144/168 (85.71%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRA-ATAAVRVSAPAAGKLCVRASLKDLGVAVAATAAS 60
           MA VTSAAV+IPSFTGLK+  AS A  +A+ +VSA    +L ++AS+KD+G AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  AILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++A++A+AI+V LG DDGSLAFVP++FSIS G+KIVFKNNAGFPHN+VFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 AGKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISMSEEDLLNA GE +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of MC11g0078.1 vs. ExPASy Swiss-Prot
Match: P00289 (Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2)

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-58
Identity = 121/168 (72.02%), Postives = 144/168 (85.71%), Query Frame = 0


Query: 1   MAAV-TSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAAS 60
           MA V +SAAVA+PSFTGLK+SG+ +  TA +  +  A  +L V+ASLK++G AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  AILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVD 120
            +LA +A+A+EV LGG DGSLAF+P DFS++SG++IVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AGKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISMSEEDLLNAPGE Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of MC11g0078.1 vs. ExPASy Swiss-Prot
Match: P42699 (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT112 PE=1 SV=2)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-57
Identity = 119/167 (71.26%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA+VTSA VAIPSFTGLK+S    +AT  ++ +A A+ KL V++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA +A+AIEV LGG DGSLAF+PNDFSI+ G+KIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. ExPASy Swiss-Prot
Match: P11970 (Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 9.5e-57
Identity = 116/168 (69.05%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRA-ATAAVRVSAPAAGKLCVRASLKDLGVAVAATAAS 60
           MAAVTSAAV+IPSFTGLK++ AS A  +A+ +VSA    +L ++ASLK++G AV ATAAS
Sbjct: 1   MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAAS 60

Query: 61  AILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++A++A+A++V LG DDGSLAFVP++FS+ +G+KIVFKNNAGFPHNV+FDED +PSGVD
Sbjct: 61  AMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVD 120

Query: 121 AGKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
             KISMSEEDLLNA GE +EV L++KG Y+FYCSPHQGAGMVGKV VN
Sbjct: 121 VSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168

[Close]

BLAST of MC11g0078.1 vs. NCBI nr
Match: XP_023534891.1 (plastocyanin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267 bits (682), Expect = 5.95e-89
Identity = 142/167 (85.03%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLKSS  +  +TAAVRVS+PA  KL VRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTAAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++ALAIEV LGGDDGSLAF+PNDFS+++G+KIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. NCBI nr
Match: XP_022976282.1 (plastocyanin [Cucurbita maxima])

HSP 1 Score: 266 bits (679), Expect = 1.70e-88
Identity = 141/167 (84.43%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK+S  +  +TAAVRVS+P+  KL VRASLKDLGVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++ALAIEV LGGDDGSLAF+PNDFS+++G+KIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. NCBI nr
Match: KAG6591248.1 (Plastocyanin major isoform, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266 bits (679), Expect = 1.70e-88
Identity = 141/167 (84.43%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLKSS  +  +T+AVRVS+PA  KL VRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTSAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++ALAIEV LGGDDGSLAF+PNDFS+++G+KIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. NCBI nr
Match: XP_038896134.1 (plastocyanin [Benincasa hispida])

HSP 1 Score: 263 bits (673), Expect = 1.40e-87
Identity = 139/167 (83.23%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA VTS AVAIPSFTGLKSSGA+   TAAVR+ +PA  K  +RASLKD+GVAVAATAA+A
Sbjct: 1   MATVTSPAVAIPSFTGLKSSGAASKPTAAVRIPSPAVPKHSIRASLKDVGVAVAATAATA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++A+AIE+ LGGDDGSLAFVPN+FS++SG+KIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EEDLLNAPGE+YEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. NCBI nr
Match: XP_022937324.1 (plastocyanin [Cucurbita moschata])

HSP 1 Score: 263 bits (673), Expect = 1.40e-87
Identity = 140/167 (83.83%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA VTSA VAIP+FTGLKS   +   TAAVRVS+PA  KL VRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++ALAIEV LGGDDGSLAF+PNDFS+++G+KIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. ExPASy TrEMBL
Match: A0A6J1IFB6 (Plastocyanin OS=Cucurbita maxima OX=3661 GN=LOC111476724 PE=3 SV=1)

HSP 1 Score: 266 bits (679), Expect = 8.25e-89
Identity = 141/167 (84.43%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK+S  +  +TAAVRVS+P+  KL VRASLKDLGVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++ALAIEV LGGDDGSLAF+PNDFS+++G+KIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. ExPASy TrEMBL
Match: A0A6J1FAV0 (Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1)

HSP 1 Score: 263 bits (673), Expect = 6.77e-88
Identity = 140/167 (83.83%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA VTSA VAIP+FTGLKS   +   TAAVRVS+PA  KL VRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++ALAIEV LGGDDGSLAF+PNDFS+++G+KIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM+EEDLLNAPGE+YEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. ExPASy TrEMBL
Match: A0A5A7VCJ5 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 PE=3 SV=1)

HSP 1 Score: 261 bits (666), Expect = 7.63e-87
Identity = 139/167 (83.23%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MAAVTSAAVAIPSFTGLKSS +S+  T+A+R+ +PA+ KL VRASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKP-TSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++A+AIE+ LGGDDGSLAFVPN+F+++SG+KIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM EE+LLNAPGE+YEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of MC11g0078.1 vs. ExPASy TrEMBL
Match: A0A5D3E5P8 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 PE=3 SV=1)

HSP 1 Score: 258 bits (660), Expect = 6.26e-86
Identity = 138/167 (82.63%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MAAVTSAAVAIPSFTGLKSS +S+  T+A+R+ +PA+ KL VRASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKP-TSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++A+AIE+ LGGDDGSLAFVPN+F+++SG+ IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM EE+LLNAPGE+YEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of MC11g0078.1 vs. ExPASy TrEMBL
Match: A0A1S3CRA6 (Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1)

HSP 1 Score: 258 bits (660), Expect = 6.26e-86
Identity = 138/167 (82.63%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MAAVTSAAVAIPSFTGLKSS +S+  T+A+R+ +PA+ KL VRASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLKSSSSSKP-TSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           +LA++A+AIE+ LGGDDGSLAFVPN+F+++SG+ IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 167
           GKISM EE+LLNAPGE+YEVQLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of MC11g0078.1 vs. TAIR 10
Match: AT1G20340.1 (Cupredoxin superfamily protein )

HSP 1 Score: 223.4 bits (568), Expect = 1.4e-58
Identity = 119/167 (71.26%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAVRVSAPAAGKLCVRASLKDLGVAVAATAASA 60
           MA+VTSA VAIPSFTGLK+S    +AT  ++ +A A+ KL V++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  ILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA +A+AIEV LGG DGSLAF+PNDFSI+ G+KIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of MC11g0078.1 vs. TAIR 10
Match: AT1G76100.1 (plastocyanin 1 )

HSP 1 Score: 202.2 bits (513), Expect = 3.2e-52
Identity = 111/170 (65.29%), Postives = 132/170 (77.65%), Query Frame = 0


Query: 1   MAAVTSAAVAIPSFTGLKSSGASRAATAAV----RVSAPAAGKLCVRASLKDLGVAVAAT 60
           MAA+TSA V IPSFTGLK + +S+  T +       +  A  KL +++SLKD GV   AT
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVAT 60

Query: 61  AASAILATSALAIEVKLGGDDGSLAFVPNDFSISSGDKIVFKNNAGFPHNVVFDEDEIPS 120
           AAS +LA +A+A+EV LG DDGSLAFVP++F+++ G+KIVFKNNAGFPHNVVFDEDEIPS
Sbjct: 61  AASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPS 120

Query: 121 GVDAGKISMSEEDLLNAPGEIYEVQLTEKGSYSFYCSPHQGAGMVGKVTV 167
           GVDA KISM E  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 GVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

The following BLAST results are available for this feature:

BLAST of MC11g0078.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P17340	7.8e-59	72.35	Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1	[more]
P00299	1.0e-58	72.62	Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]
P00289	1.7e-58	72.02	Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2	[more]
P42699	1.9e-57	71.26	Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT...	[more]
P11970	9.5e-57	69.05	Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]

BLAST of MC11g0078.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534891.1	5.95e-89	85.03	plastocyanin [Cucurbita pepo subsp. pepo]	[more]
XP_022976282.1	1.70e-88	84.43	plastocyanin [Cucurbita maxima]	[more]
KAG6591248.1	1.70e-88	84.43	Plastocyanin major isoform, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
XP_038896134.1	1.40e-87	83.23	plastocyanin [Benincasa hispida]	[more]
XP_022937324.1	1.40e-87	83.83	plastocyanin [Cucurbita moschata]	[more]

BLAST of MC11g0078.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFB6	8.25e-89	84.43	Plastocyanin OS=Cucurbita maxima OX=3661 GN=LOC111476724 PE=3 SV=1	[more]
A0A6J1FAV0	6.77e-88	83.83	Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1	[more]
A0A5A7VCJ5	7.63e-87	83.23	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 ...	[more]
A0A5D3E5P8	6.26e-86	82.63	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 ...	[more]
A0A1S3CRA6	6.26e-86	82.63	Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1	[more]

BLAST of MC11g0078.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20340.1	1.4e-58	71.26	Cupredoxin superfamily protein	[more]
AT1G76100.1	3.2e-52	65.29	plastocyanin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 97..115 score: 83.95 coord: 146..165 score: 80.37 coord: 74..93 score: 57.93
IPR002387	Plastocyanin	TIGRFAM	TIGR02656	TIGR02656	coord: 69..167 e-value: 1.2E-43 score: 145.6
IPR002387	Plastocyanin	CDD	cd04219	Plastocyanin	coord: 69..167 e-value: 9.19472E-51 score: 155.99
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 144..158 score: 51.99 coord: 88..101 score: 40.02 coord: 103..118 score: 55.62
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 70..167 e-value: 1.3E-34 score: 118.6
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 69..167 e-value: 2.6E-29 score: 103.8
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 67..167
None	No IPR available	PANTHER	PTHR34192	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 1..167
None	No IPR available	PANTHER	PTHR34192:SF11	PLASTOCYANIN	coord: 1..167
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 146..160

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0078	MC11g0078	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0078.1-cds	MC11g0078.1-cds-MC11:588645..589145	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0078.1	MC11g0078.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0009055	electron transfer activity