MC11g0005.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0005.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	UPF0047 protein YjbQ
Location	MC11: 69647 .. 85957 (-)
Sequence length	1336
RNA-Seq Expression	MC11g0005.1
Synteny	MC11g0005.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAAAGTATTTGAATGGATTGGTTGTCAATGACACTGCAGATGCCAGATGTAGATGCGTCCTTTGGTATTCATCCCATCATTAGGCGGTTCGGCTTTGGGGACGACGCAGGAGTGGTGCGGGCTTTGGGCTGCAAATAATGCAAGGCGCTGTTCTCTTGGCTGTACAAGCACAACCAGTCCGAGTAAAGTTGGCGAGGAGCATCAATTGCAATACCAGTAGTGGTCATCCGTCCGCCTCCGCAGGCTCAGGCACTCCAAGCCAGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGGTGATCAATTGCTTATCTTCTCCCACCAAATCCACAATCTCGTATTCATTTACTGGGGTTTATTTAATGATCACCTTCTTTCTCTTTTCATAACTCCCCGATGCTTAACCCATAGCTTCTCATCCACATCTTTCAGTTCCCCTATTACTACTTGAATTCTGAGAGTGTCGCATTCTTTTGATATATCCGAAAAAATCCTCTTATTTTCCTTTTAGTTTGAAGCAGAAAAAGAATCCTCTTTCTCGTATTTGTATATGTATTGGATATTTCTCGTGTCATCAATATTTGATATCACTAGATAAAGAACCACTTATATTCTAAAGGTGGCTTTTACCAGAAAATGAAAATCAAAGAGAAGAAGATTTTCGTTTGCAAACAGTCTTATATATATTTAAAGAATACTCAATCCCCATCCCTACATTTGTTGCACTAAAAAAAACTGCGGTGAGATTTTAAAATGGGGGGCGTTACAACTTTAACGTGCACTAAATTTTTCCTTATATTCCTGCTACTGATTTTGAATTCTGTATCAGATAATGAAGGAAATTGGACAAGACTTGGCAGAGTTCAAATGTGGCCTTGCTCATATCTTCTGTAAATCTTCTAATCCCATTTTCCTATTTCGGAGAATCATGTGTAGTTAAATTTATTTCTCGAATCATTTTATGTCTTTTCAGTGCAGCATACAAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCGCAGCGATACTGAAACCTTCCTCAATAGGATAGTGCCTGAAGTTAGTTTGTAATTGGCACTTATCATTTTCAACTCTCATTTATTGAAACCTGTCCTATTTGACCCATTCTCTCTGTCTCTCTGTCTCTCTGTCTCTCTCGGGGGTTGTTTGCAGGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGTTATCGCAATTTATTTCCTTCTACTTTATACTTAGAATTTTCCCTGTTTTTTGTTTTCTGATTTCATATGCTGAAAAGGATAATATACTGCTAAAAGGGCCTGGGCCTGGGATTTTGTCTGCTATCATAATATTGTAAGATGGTGGTGCATGGCAATGGGGGACGAGAGAATATGAAAAGTAGTATTTTATGAGAAAAGGAAGAAAAGATCAACCAACAAGGGCCAAGAATATTTACTACTTAGATAGAAACGCAGACTGAAACAAAATTTCTCTGAAGTAACCTACATGTTATATTTGTAAAAACCAAACTCACTTCTGAACCTCCATCCCATCTAAAAGATGATTGAATTGGTAATTATTATCAATAATTAAGCTTCCGATAGAAAAGGATTCTTAGACTCAAACTAACGAATTTAAATAAACTAAAACCAGGATAAAACTAATTCAACAAATTTGTTACACCTACTTCTGGAAATTATTGAATGTATCTTAGAATAATAAAATAACTAGCAAAACATGTTCTATATATAAAGAACACTATTGTTGCAAACTTTTCTTTTAGAACTTTCAAATAGAATGCAAGTGCTTCAGCATCGCGCATCCTGTTGTTCGGTCAAAAAGAAGAAGGGTTGTGCCCAGTCCTAAACAGCTCTTCCATTTTGCCTTTTGGGAATCAGATGATGCACAGAGAAAATTCATAAGAAATATAGGATGGGAGGTTTGGGAAGGCCTTTATTTTTCCTAAAAAAGTTACTCTCTGGTTTTCTAGTTCTAAAATGTTATAAGGATTGGGTATATTGACAATTTTTTTTGTCATTTTTGTTCATGCTGTCCTAGAGTCGAGCAAGCCATTCCTTTTTATATATATATATTTTGACAATGAATATGCTCATTATGCAGGTCCGGATGACATGCCAGCACATATTAAATCATCAATGTTTGGCTGTGCTCTCACGTGGGTTATTCTACATAGTTTATGGATTAAAAGCCTGGTTGACTTACAGTTCTCATCTGTTGGTATTCTTTTGCAGGATTCCAATTACAAATGGAACGTTTAATATGGGTACTTGGCAGGTACAATTTAGTAGATTTTTAGTTTATGTGTCGTGTATATATATGTCTAGTTTTTCTAACTAACAATTCTCGCTGATAGTGAGAATGATTAATTGGAGAATGACATCTTTTAAATTTCAATATTGATGCTTTATTCATTTAGAACACGATTATGTTATTGATATGTTTTGTTATGTTTTAAATTTCGAGATTTGTAATTTAGGTATGAGAACAGATTTGTAATTTATGTTATTGATATGCTTTATCAACCTTTATATGATTTGTTATGCTATTTAGAACTGAATTATGAGCTATAGCTATGTTAGTCTTATTGTCACAATAAATCCATCCAGACATCCTCCAAGGAAACTTCAATTCTTCAAGTATCTTTTTGATCCATATACCTTCACAAATTCCATACTAAGACTCTCAACTCTACTTCAACACTATTTGTGGCCACCACAAACTCTACTTCAGCACTATTTCTGGCCACCACATTTTGTTTTTTACTTCACCATGTAACTATATCGTCCATCAAAGCAATAATAATCAAAAGTAAGTCTTCTATCGGTAGCAATTCCAGCTCAGTTTGCATCAGTATGAACTTCTACTTCAGTACTTCTAAGTGGTTATTCTTTTTTAATAAAATACCTTTTCTAAGAGTTCCTTTCAAATATCTCAAAATTTTGTAGGTTGTTTCTAAATGAGTCTGTCTAGATGCATGCATAAATTGACTTACCATGGGGGCTTTCTCATCCTCGGGCCTTTGGGCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTTATTTATTTTTTTTATGACAAGTGTCTATTTCCTAAAAAAAAAAAAGGTTCAGCAGGGGTTTTTGCAATCCTACAACCAAGTAGTCTTGTTTCTCCAAGTTAGTCAAAAACATATTTTCTTTGGTTAACAAAGATACATTTCTTTAAAACTCCAATCTCTCCATTACCTTTCTTTTAGAGTAGAAGGAAATTTAAACGCCTAAGGTCTTTGAATTAGGATGAGCAGCTGCATTCGAATTTATTGGAAGCCTTTAATGAGGAGAGAGAAGGCAAATGCATGATCTATTCGAGGAATTCCTAATTTAGAAGGGGAGTTGAAACGTCATTTAAAAGAAAGGGATTTAAATTGTCTCTCTCAAGGGGTGATTAATTCAACAAATGAAAATATAGCAAATCAAGAGCCGTTACAAGATTTCTCTGTTTGAAGATATATGCTCTGAAGTTAGCCTCAGTAGTTATGCCTCTTCCCACATTTCAAATTCAATAAATTCTTCAAGTGAAGTATTATGTGAACAATCCTTCGCAGAAGAATTTTATGTTCGATGAGTTTCAGGAAGTTGAAAAGTCTTGATTAATTCCTCCAATCCTGAAAGAAGTTGGTATTACCCTTGTTAGAGTATAGATATTAGTATATTTTATATTCTTGTATTAATATTAATTTGTCCTTTACCTTCTCCTTATAAGATTAGGTCAACCTTATATATTTATCTATATATATAGACTTTAATAATGAGAATATATTAGTGTTTTTGAGGCGCAAGGTGCACCGCAAGGCAACAAACCCTTTGATCGCCTTGAGGCGAGAGGCGATACAAAGGCGACGCCCGATTGAAGCGAGGCGCACCTTAATAAATAAGTAAAAATTATGTATATAGTGCTTAAATTACCTTAAAAAATCAATACCAAAATAGTAAATGTCAACAATACAAAAAATCAATACCAAAATATCAAAAATACTTTAGGTGAAAATATTTGGTGCAAATAAATTTTAACTTAAATAATTAAGAAAAATTAAAAATATAAATTTAAAAAGAAATTAATAAAATTAGTGGTTAAGTAGAATACTAAAATTAAATCATAAATTAACTTAAATAAAAAAAAAATTATTGCAATCTTTCCCTTTCGCTTCCAAATGGCAAGATAAAATTGCATGCAATTGATGTGCATGCCTTGAAAACGTAAAAGGAATAGGAAAAGTCTCAACCAAGCATCAAATCCCCATATCTTTTAATCTATTTTTCAATTCTTCTTCTACTTCTACTTTTCCAATTCCTCCTCTTCTTCATCTCTAATTCTTCTTTCATGATTCTTCTTCTTCATCTCTAATTCTTCCTTTCCGAGCACCTACGTCGCCCTGAATACACATTCATAGGTGAAACTAAATATTTTGATTGTCTACGAAGAAGGAGAAGGAAGGCATGATGGCTTCATATCGTGCAATGAGTGGGGACAAAGGCGGTAGCAATGGCAGCAACAAAGGATGAAGCGGTGGTGAAAGAGGAAGACTTTCGTGTGGGTATTTCGATTTTTGGGTGTGGGTTTGCATCTTTTTAGGGCTTCTTTTGTGGGTTTTTTAAAATTATAACAAAAAAAAAAAGAGTCGCCTCGCTTCAAAGAGGTGCTTGCCTCACCTTATGGCGATGGCGCCAAGGCGCAGCAAGGCGCATCCAGGCCAAAACGCCTCGCCCCTCGCCTTAGGCGAGCGCCTGGGCGCGCCTCGAAAACACTGGAATATATCACATTGGATTCTCTCCAACCTTAGTCTCTACATGGTATCAGAGCTCTAGGTTTTGTGCCCATTAGAGTTTTGTGCCCATTAGGGTTTTGTCCCTTAGGGTTCTGTTCATTGCTATCCAACTCAACTGACTACCACCGTCACCGACCACCACCACCGCTGTTTACTGATTCGCCAATGCTGCTGTTTTCCAATTGCTGTTCGTGGGTTTCGTCTCGCCGCCAATCGCCGTCGTTTTCGCCGTGTGCTTTCGTCACCACCAGTTGCCACCCGTCGCCTTCGCCCCTCTGGTTGTCGTGGGATAGCACTTAGGGTTTCTAGTTTTAGAAAACTCCTAATCCGGTTTGGTTCCAGCAGTTTGATTCATCTGTTTTGTTTGGTTCGGGTGGTTTGGTCTGGTTCTGTCGTTTTGTTCAAATAAGTTCGTTTGTTTGTTATGGCTGATAAGAAATCAATCGTAACTTCTGAGGTGATCCCAATGATATCAAAAATCACATAACACAAGTTGAATGGAGCACGAATAGATTGTTTGTCTAACAAGTTGGACATGATTAATATAAATGCACCAACTTAAGGGGGAGTGTTAGAGTATAAATATTGGTATATTTTATATTCTTGTATTAATATCAATTTGTCATTTACCTTCTCCTTATAGGATTAGGTCAACCTTGTATATTTGTCTATATATATAGACTTAAATAATGAGAATATATCACATTGGATTCTCTCCAACCTTAGTCTCTACAACCCTTATACCAACTTTGTCAACAAAATGAAATATTATCTTGGAACATCTGAGGTCTTGGTAAAAAGAAGCAGAAGCTGACAATAAAGAACTTTATAAAGAATCATTGCCCGGATATTGTTCTCTTTAAGGAAACCAAGGTGCAGCAAATTGATAAATCTTTAATCAAAGGCCTCTGGAGTTCGAAAGACATCGGTTGGTCCTCAATTGGTTTAAGTGGCAAAGCTGGAGGCTTATTAATCATGTGGGATGAGAGCAGATTTTGTGTCAAGGAGCTATTGGAGGGATGCTTTTCATTAACCATTTGTATTTCCTTTTCTGACTCTAATGAGATTTGGTTAACAAATGTTTACGGTCCATCCGATTATCATGAGCGAAAACACTTTTGGTTTGAAGTCTGTGATGTCTATAGCTATTGCGGAGATATTTGGTGCATTGGTGGTGATTTTAATGCAACAAGATGGTCATCCGAAAGATCTTCTAGCGGGCGAATTTCGAATGCCATGAAAGCTTTCAATTCCATTATTGAGGAATTAGAACTTCTGGAGGTGCCCCTTTCCAATGGTAAGTTTACATGGTCTAAGGCTGGTAATGGCTTCGTTAACTATTTGATTAACAGGTTCTTAATCTCTAAGGAGTGGGACAATCTTTTTGGCAACACTAGAGTCTCAAGGGCCAAAAGGGTCAAGTTAGATCATTTTCCCCATTTGCTAGAAGCAGGAGATTTATCTTGGAGCCCTTCTCCTTTACGGTTCTACAATTCTTGGCTAAAAGATAAGGAGTGTACTCGTATTATCGAAGAAAAATTGGCAGCTGGTACTTCTTATGGATGGGCTAGATTTCCCTTTCTTCCAAACTGGGAAATCTAAAGGCACCTATTAAACAATGACATTTGAAGAATGAAAAGAAGAAAGAGGCGAAAGAGGAATAGATCATCAATGATATATTCTCCCTTGATCTCTTAGAAGAATGTTTTGGCTTATCTTCCGGTGAACGCGATAAGCATTGTGCCCTTCAAAATGACCTTCTCAACATTTATGTTGAGGAAGAGAGGACTTTGATTCAAAAGTGTAAAGTTCACGGGTTCATGAACAAGGAAAGGTTGTGATTACAAAAGAATTTCATGTAATTTATTCACTACCAAGAAGTAGTGCTGTATGTCACAACCATACTAGTAGAGAGTAGGTTGTGACGCCCACGTAGTGTGCAAGTGTCAGCGACAAGCATATGTCGCCCATCGGGCCATGTCAAGGGCCGAGAGTGAAGTGCCGTGATGCGACCAAGGAGGATGGTGCATCACCTATCACACCATATGGATGTGCTCAAGAATGCCTAGAGAAGGCATATGCAGAATGCAAAGCGAAGGCGACGTCAGTGGTGTCGGTGACAAGCTCAACGGGGGCCAGTTGGGGCCCCGGGCCACGACCCTAGAAGTTGGGGTTCCGTCGAGAGTTTGGACGAGCGGCTTTAAAGTTAGATGCATATTAGTGAGATATGTAAGCACGCCAAGTTTCGTGTCAATCGGAGTTCAAACGTGCACTCTACGTTGGCGAGTGACTCCTCGCCACTTTCGACGTTCATTCCTGCCAAGTCAAGTTTGCCTTAGAATGTACCTTAGGGGGAGGCATGGTGTTGGCTCTCCACCACCCCTGGGCCATGTTAGGGCCTAAGTGAGCCACCCCATGGCACATGCGTGTGTCATGGCGAGGGCGAGCGTCTACAAGACGAGTGTCTTGGGCGACTTCCGTCGAGGATAGAAAACTCGAGGACAGTGTCGGGCGGCACGGGTGTGCCGGCATTGCGCCTCGGTCCATGTGTCGGAGGTTGCACCACGGGGGTCCCTATGCGGTACGGTATGCTCAAACGACACGGCACGAGCGCAAGAGTCGTCGTGCCACGATAGTGTCCGGATGGCTGGATGTCCGGAAGGTCCCGATCATTAAGACAAGCACATGGGTCGGTTCTCGGTATGCGTGTCCAAGTGAGCAGTGAAGCCCGATGACATCCCGAGACTCGGGGTGGCATCCTATAGTACCGGTGTCACCCGGTAAGTGAGAAAAAGCTAGTCTTGGCCCGGTAAGCGGCAAGACTCATCCCGGTTGCCAAGTTTAGTCATTCATTGTCCGGAAGTCGGCAGGAATCATCCCGGCAGTACCCGGTAAGGCCGCTTAGCCCGTTATTGACTAGTTTCTCGGCAGGAATGGTCCTAGAGACGTCCGATGGGTCCGATAAGCTAGTTTTGACATAGTTAAGCGGCAGGAATGTCCCGGTTGTACCCGGTTGGCGTTTTAAGCTCGTTCTGACCCCGTTATTGGTCAGAACTCATCCCGGTAAGGTCCTGGCTCATCGTAGGAGCGGGACGGTCGAGTGACCGAGAACCAAGATGGTTGAAAACAAGTTGCGACGTCGCGTTCAGAAGACCTTGGCCTAGAGTAGAGGCAAGGTAGAGCTGTGGGACTTGGCCTAGTGTAGAGGCAAGCCGGCTAGAGTCGCGTTAGAGTTTAAATGCACGTACGGGCGACGTGCATTGCCGAGTCAAGTGAGAATTCCGCTGTAAGTGAAGCTCGGTTGAGGAAGAAAGAACCTCGCCTAAGGTCCGACGAAGCCACAAAGGGGCGTGAAAAGTGGATTGGAGCTAGAGTTCCTCGTAAGGCTGGCCATGGTCCAGCTTTGATCATGGCGCCGCACGGTTGAAAAACGTACGACCGTGACACTGTACATCCCTACAAAAAATGTAAAAAGGAGTAGTTTTATCCTCAAAAACTCGGGAGTTCCTTTCTAGCCAAAGGTGCCACAAAAGTGCTCTTGAAGCACACTTTCAAAGAAATTTAACCCTTTTAGGAAGCATCCACCCATGAAGAAATTCAGAAAGCCAATCATCAATTTGTTTTGGGAAGCATGTTGCCACCCCGGAAATATCTAGGAGAAAATACCAGCCTCTTGCTGCAAACTGATAGTGAGTAAAATTACGATCAATGTTCTCACTACTTCCATTGCACAAACTGCACACTGAGGGGGAAATCAACCAAGTTCGGTACTTCTTTGGAGCAAATCATGTGTTTTAAGACTTCTATGTGCCAGAGACCACAGAAACACCTTAATCTTCTGTGGAGCTTTGAAATTCCAAACCGCCAAAATGAGAGGGGATTTTAAGGACGGGTTGCACTCCACCATGTTGAGACAAGTCGAGCGTGTGGAAAAAAGCCCTCCTTTTCCTAGGGACCAAGCTACACGGTCCTCTCCTTCCCCTAACCTCACCACATCGATAGTGTGAATAAGGTTAATCCAGCTATCCACTTCCCAATCAAAAAGGCCTATACGAAAGCCTAAGTCCTTCTCACTCACTCCAACAAGCAGCAAATGTGGCCTCTTTTTTTTGGTGGAAATGTTGAAAAAATCAGGGAAAACATCATTTAGGGGCCTCTCTCCATCCAAGTATCCAACCAGAATCTTGTACGATTCCTCTTTTGCACTTTGAAGGTAAGAAATTTGGAGAAGAAGGTGCTGTTTTTTGCAATCTCATACCATGGTCTACCTTTAGCACTCCCCCCCGGGGGAGTGCCCCACTTCGTTTTTGTCTTCTCCATAAATATTGGCCATCACCCTTCTCCATAAGGCGTGGGGTTCGTGAGTGAATCTCCATAACCACTTGAGAAGAAGGCTATTATTTTGTTGCTATAAAGCCCCTATACTGAGTTCACCAAACTGCAAGGGGAGGCTAGTTTTCCCCCAATTCACCAGGTGGTTACACAAACCTTTTGAAATCCCCCCATTCCAGAAGAAATTTCTAGTTAAGCTCAATTTCTTTAGCCACCCCCTTTGGAGCTTTTAGGAGCTAGAACAAATAGAGAGGTAAGCTAATAATCACCGACTAAGCTAGAGTTGGCCTACCCCCTTTTGAGAGAAGGAGATTCTTCCACTTTTCAATCATTTTCTTCACTCTGTCAATAAGAGGTTCCTAAAACGACTTCTTAAAATTTCCTCCTAGTGGGATGTCGGATCCTCTCCACTTTGCAACCCATGTCTTCCTCCACATGAATCCCTATTAGAGAAGTTTTCCCCAAATTCAAAGACAACCCCGAGGCTTTAAGAAAAATGTCCAGGACCATCCACCATCTATCAAGCATTCCAAGGTCATTTTAGCAGAAAATTATTGTATCGTCAACATGTTGTAAGTGAGAAACGTTCACCTCATGTCTACCAACCCCAAAACCTCTGACCAGTCTTCGTTGGTTGCAAAATGAACCATACGGCTAAAAGAATCACCAATAATCGTGAAGAGAAAAGGGGAAAAAGGGTCCCTTTGCCTCAATCCTCTTTTTGCCACAATCTTACCCCTCGATTTGCCATTTATGATAATGGAAAAATTCGCTGAAGATAAACAACTTTTAATCCAATTTCTCCACCGAGGGCCAATGCCCTTTTGCTCCATAACCGCATCGAGGTACATCCCATCCACCTTATCATAGGCTTTCTCGTAGTCCAGCTTAAGAATGAAACCAGATTTCTTCCTGTTCCCAACCTCCCATTGTCTTAGAGGCTAGGAGAATAACATCTATGATTTGTCGACCCTCTATGAAGGATGATTGAGCATCGTGAATAATAGGTAAAACTTTCTTAAGCCTTTCTGCCAACACTTTCGAGATAATCTTGTATAGCGAAGTCACAAGGCTGATCGGTATATCTTCCCCTACCTTCATTGCCTTCGTCTTCTTCGGGATCAAATAGATATACGTCTTATTTGTACTTCGGTCGATGACAACATTCCTAAAAAAATCTTGGAACACCCCTAGCAAATCTACCTGGAGGACGTTCCATGACTTTTTAAAGAATTCATTTGTGAAACCATCCGGACTTGGGGACTTCAAATTTCCCAGGTTAAAATCCGCTTGTCGAATATCTTCTATATCAAAAGGTCTTTCAAGCCAAGCTTTCCAATTCTCCTCAAGGCCACCCCATTGCAAATTTTCAACAAAAACTGATGCCCAGAAGTATCCCCATATAAACGTTCGTAGAACCTTACTAGCTCCTGCTCAATCTCCTTTTCTAAGGTAAGCAAATCCCCCGAGTCTGTTTCTAGCATTGACATGCTAAATTTAGACTTCATTGCCGACGCCCACCTATGGAAAAAGCTGGAATTCTCATTCCCTCTTTCAATCACAGCAGCTTGCATTTTTTAGCCCACTTTCTTTGTTCACTGATAATTAGGCTCAAGTAGGTCTTTTTATGTTCCTCCCTGTCTTTCCTCTCAGCTTCATAAATCAAGCCATTCTAATTTATCAAGAGCTTTGATTCTATTTTCACGATTCTTTAAAGCATCTTCCACCACCCCAAAGGTCTCTTTGTTCCACTTCTCAAACAGAACTTTAAGAGCTTTCGATTTCCCCATAAAAGCATATCTCAACCAACCTTCAGAAGGGAGGGATGTCCACCATGATTCTACGTTTTCCTTGAGAGTGGGGTGGTCTAACCAATGTTCTCAAAATGAAAAGGGGAAGGTCCCCATTTCTTTAGCTTTAAAAATAGGGGAAAATGGTCCAATGTCGTTCTTGGGAGCCTAATTAACTCCACCTCTTTGAAAGCCTCCCCCCAATTATGAGAGAGGAAGAATTTGTCTACGCAAGTTGCTACTGGTCTCTCCCAACCGTCGGACCACGTAAAAAAACCATTCTTCATGGGAACGTCAACCAAACTCAACTCGTTGATCAACAAGTTGAATTTCTTCATACTTCTAGTGACTCTTCCCCCATTTAACTTCTCTGTTAATCTTCCCACCACATTAAAATCCTCTGCTAAACGCCAGTTATCAGCACACAGGCCATTGAGATCTTGCAGCTCCTGCCTAAGGTCATCTCTTTCTTTATAGCTAGAAGGCCCGTAGACTCCTGTAATCTAGCCAAAGAAACTATCTTTGACGTTAGCATAAATAGAGACCGAGAACGAATCTATCATGGAATCCTACACTTGCACCGAATTTCGGTTCCACATGACAAGAATTCCACCAGCCGACCCTACAGCTTCTAGCTCTGCCCACCCTAAATTTTAGTGAAAGTTTCCTTTTTCTTGCTGTAAAAAATCTGTGGAAAAAACTTTGTTTGCATTAGCTTTTTTCAACCAATGAAGCTTGTACCTTTGGATCAAGTTCATTTCTTCTCAAATATGCAAGTTTGCAAGATCACATTTTAGAGCCAAACAAAGATTAATTTCTTCCCGAGAAATATTGCTATTCTCCTCTTTTGTGTTGATCCACATAATGTCTTTCACTATGGAAACTCTCTGTTTCTTCTCCTGTTCCTTTCTGCCAAGTCCCAATCCATTCTTTAAGCTTGACTTTCACGTTGCGGAGCTTCGATGAAATAATGGAACCTGCCCTACCTGATGAAGAGAATCCTCTGCAATGATTTTTTAATGATCTGTTTGCAAGCTGTCAAGTAACCATGAAACGAAAAGGAGAAGGCCCCATAAGAAACTGCCTTGAATAATGGGTAAATGATCCGAAACAACTCTTGAATTATTAGTTCCAAGCAACATCCTTCAGCTTCTTTCTGGTATGCAGCTAAGTCCTAAAGTTTGGCTCTTTTCGGTCAACGGTATTAAAGCTTTACTATCAGAATTGTGGTTCAAAAGAAATTAAAGGATTTTTTAGGGCAAAAGCAAGTCCTTCGCTGTTTCAGCTTAGCTAAGTTCAAAGCTTTTCATTGGTGTTCTTTCTCAAATTTATTCTTTAATTATTCCCCTAGCCTTTAGTTTCAATTCTTGTTTTCATCTTTTATCTTTTTACCTCACTCCTTTGGGAATTTGTCTCTTTAAACAGTTTTTGTTCCTTTTTATTCATCAATAAAAAGTTTGTCTCTGGTTAAAAAAAAAAAAAATTGTTCTTCAACTCTGTGCGATCTCGATAATTCAATTTAAAGCATTTGGTCATATCCTCACCCTGGCCTCATATTTCTTGTATTGGCGAAGCACCTTCCAATACTGGTCTCATATTTCTTGTATTGGCGAAGCACCTTCCAATAATTGCTAGTTGTTGGTAAATATCCTCATCGATTATTATCCCTGTACAATCTCTCTCTTCCACTAAGAATTAATTCATTTTTCCATTTTCTCGCTTTTGGCATTTGTAGATTTAGTTATAGATTTTATTTATTTTTGGATATCTATAAGTATTTCGGTTAGCTTGTGCACACCTCGACTAATCTCATGGCACAACCGCTTGACCATACTACATTTGGTTGCCAAGGGAACTCTTAGGATATTAAATCATAGATAGGTGGTCACTATGATTCAAACCCATTACCTCTAAGCCCTTTACTATTTACAATGGCCTTAATTAACCACTGGGCCAACATATAATAGTTCAAAATTAGCTATAGATTAATAGGCAAGAATATTAAATTTCCCTTTATACGTATAGAAAAGAGAGGTACATAGTTGACAAACTTTTGAGAGGTCAGTTCTCTCCACAATTTTGAGAGGTCAGTTCTCTCCACAATACACATATGACCGTGATCCCATATTCTAGGAAGCACAAACATGGTGTGGTTTCTTTTCCTTTCAATTTATAATCATTCTATTTCTTCATTTCTTCATTGCACCGCAATCACTCCACCACCCATTTCTCCTTCATTGCACCACAACCACCCCTCCACCCCTACCAGCTTCTCCCTTGCCTATCACTAATGCAAGCCACCGACACTAATAAACCCAGGGACCCAGTTTCTTTCTCTCGCTAATCGCTGGATCAAACCACCAGCACTAGCAACCTAGTGAACCAGTTTCTCTTTCTCTCGCCACCGCAAGCCACTACCCACCCGCACCAACAACTGTCGTCCCAACTTCTCTCTCTCTCCCTCTCGCGACCACAATCGAAAGAAAAAAAAAATCGGTTAAAATCGAAAAACCAACCAACCGAACCAACCAGTCAGTCGATCGGCTTAAGCAATGTTTAAAAAAATTCGGTTTTCATTTCGAGAACCAATGGGTCGGTTTTGGCTAAAAACCGGACTTCGATCGACCGGTGATTACCCTAATGCAATCTCTCTCTTCCACTGAGAAATAATTCATCTTTCCATTTTCTCGCTTTTGGCATTTCCAGATTTAGCTATAGATTTATTATTATTGTTATAATATACATTTTTCTAGATATCTATGAGTACTTGGGTCAGCTTGCGCACACTTCGACTAATCTCACTGCACAACTGCTTGATCCTAATATATTTGGTTGCCAAGGGAACTCTTAGGATATTCAATTTTAGATAGGTGACCACTGTGGTTGAAACCTATTATCTCTAAGCCCTTTGCTATTTACATTGGCCCTGATTGACCACTTAGCCAACCTAAGATAGTTCGAAATTAGCAATAGAGGCAAGAATAGTAAAGTTCCCGTTATTTACGTATAGAAAAGAGATGTACATAGTTTGCAGACTTTTGAGAGGTCTGTTCTCTCCACAATACACATATAAACACAATACACATGTGACGATGATCCCATATTCTAGGAAGGACAAGCATGGACACGCAACACAGATACGACATGACACGGAACGACTACATGTTAATTTCTAGAAAAGTAGGACACGACACGCTGGGATACATTAATTTTTTTATATGAAAAAAATATGTGCGTATTTTGATATATTATTAATATTTAAGATTGTTATGAAGGAGAACAAATGAAGGAGTGTGAGAAAATGCAAGTGAGGAAGATGAAACGGAGGAGAGAAGAAGAAATGGGAGAGAAACTTCTGGAAAAGAGAAAGAGAAGAAATTGAAAATGAAAATAGAATCTGGGAGAAGAAATGGAGGAGAGAAACTTCCGTAAAGGAGAAAGAGTGGAAAAAATGCCACGGAGGAGGAACTTATGAGAAGGAGAAGGAGAAGAAATTAGAAACGGAAGAAAAAACTAAAAAGAAAACCCTAGTGGTTTGGGCTGGGTTTTTAAAAAAAAATTCTCTTAATGACCTGTGTGTCCCTCCCCCCTTCCCCTGTCCCTGCCTGCTGTGTTCCATGGTGTCCGGCGTGTCTCAAGCAAATCTGATTAGAAAAAATAGACGCGTGTCCGAGCATGTCGGTCTTCGACACATGTCTGACATCGACACTTCGCCATTTTTTAGCGTGTTGGTGCTTCCTACCCACTATTTTCTAACTATCATACCTTATTACTATTTACTATTATAACTATCCAATAACTTCCTTCTAACTCTCTTGTAACTACCCATATAATACATATATCCTAGTAACTCCCCCGTACCCTTCCCTTTGATAAGTAAAATGGATCGGAGGAGTGATTTGTCCATCATATGTCGGGTACAAAAATGTTCAAACTTGAAGAATCGATAGCATTTCTATTATTACTGAGGAATATTAGGAAGCTTTCCCTTATTCATGAGGGTTGGACCGGGACTTTCCTTTACCCTAGTGTTCCTGCTTATCTCCACTTCCTCCACTTCTTTCAATGTGCAAGTTAGCAAGCAAAAGTATGTAGGTGACTAACTAACAGAATTCTGTAATTAGCAGCCTAACCACTCCATCAACTACACCAGCCTTATGATGAACTCTTTTTCTTTCGTGCTTATGTTAATCATGATAAGGACTTATGTTGAGCCAGAAAATTAGTAGTGTTGTTTAATTTGATTTTACTTTTCATTATTGTAACCATTTGAATTGGTTGTAATACATTTGTTTTTGCATATTTCTGGTCCTTAAGTTTATATGATTCTTTTAATTTGATTGAATTTGAGGTAATGCCTAAGGGATCAGGATGCCGCATTGCAGGTTTTAAGGATCGGAAGTTGACTATATCAAATTTTGTTGCATTTACTAGAACTAGAGAGATGAGATGGGGAAGGGTTGATGAATAGATTGGGAGTTCGGATGGGGGGGTCTCTATGCTTGGTTTAGCGTGACGAATGGATTTGTAAATGGAAGGCTACATTCTACGACAGATGAAATTGTTAATTTAAATTTAAAGGCTAATTTTGATTGGGCTTTGGATGCTTCAGGGAATATGGCTTTGTGAGCACCGAGACCACCCCACTGCACGCAATGTTGTGGTCACCCTGAATGGAATTTAGGAATATGCTAAGAGTTGGAGCTTCTGTCCACCCCTCCATTTCCCATGGTTGTATCAATGTCAATAATAAACTATGTCTCGCTTACCATCTCGGCAGACCTGGACTGACTTGGACCATGTCAAATCTCTGTATACCTTATCACTCAGGTTCTATAATATACTCCTTTCGTACTTTTTCCATGTCAGTGAGTTAACTATACCAGTTCTACAAGAAAATTTTTGATGTAGAAAGATGAAAGCGAATGCGAAAATGGAAATAAATTGGATTGGAAACATGCTCAAAAGTAAAAATTGGAGGGATCGACGGATTGTCGTCTTTTTCTGGCGCAATTGAATTAAAACAGCCTATTCTTTTAATATCACTGCGAGTGTGACAATGGTCACGTTTTATGTGTGGACTTGACTTTGGGGGTTTAGTTCTCAACTTCCCCTATTCCATATTGGGGGGCATGTCCACATTGAATTACAGGATCGGCATGTTGACTATATGGACTTGACTTCGGGGGTTTAATTCTCAACTTTCCTTATTCACTTAAATTGTTATTTTGAATTTTTAATTTATTACATACCTTCGTTTTTTTTTATTTCATTGGTTTGGTGCACTAATTTTTCTTTCCTTCATTTTTA

mRNA sequence

GTAAAAAGTATTTGAATGGATTGGTTGTCAATGACACTGCAGATGCCAGATGTAGATGCGTCCTTTGGTATTCATCCCATCATTAGGCGGTTCGGCTTTGGGGACGACGCAGGAGTGGTGCGGGCTTTGGGCTGCAAATAATGCAAGGCGCTGTTCTCTTGGCTGTACAAGCACAACCAGTCCGAGTAAAGTTGGCGAGGAGCATCAATTGCAATACCAGTAGTGGTCATCCGTCCGCCTCCGCAGGCTCAGGCACTCCAAGCCAGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATGAAGGAAATTGGACAAGACTTGGCAGAGTTCAAATGTGGCCTTGCTCATATCTTCTTGCAGCATACAAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCGCAGCGATACTGAAACCTTCCTCAATAGGATAGTGCCTGAAGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGTCCGGATGACATGCCAGCACATATTAAATCATCAATGTTTGGCTGTGCTCTCACGATTCCAATTACAAATGGAACGTTTAATATGGGTACTTGGCAGGGAATATGGCTTTGTGAGCACCGAGACCACCCCACTGCACGCAATGTTGTGGTCACCCTGAATGGAATTTAGGAATATGCTAAGAGTTGGAGCTTCTGTCCACCCCTCCATTTCCCATGGTTGTATCAATGTCAATAATAAACTATGTCTCGCTTACCATCTCGGCAGACCTGGACTGACTTGGACCATGTCAAATCTCTGTATACCTTATCACTCAGGTTCTATAATATACTCCTTTCGTACTTTTTCCATGTCAGTGAGTTAACTATACCAGTTCTACAAGAAAATTTTTGATGTAGAAAGATGAAAGCGAATGCGAAAATGGAAATAAATTGGATTGGAAACATGCTCAAAAGTAAAAATTGGAGGGATCGACGGATTGTCGTCTTTTTCTGGCGCAATTGAATTAAAACAGCCTATTCTTTTAATATCACTGCGAGTGTGACAATGGTCACGTTTTATGTGTGGACTTGACTTTGGGGGTTTAGTTCTCAACTTCCCCTATTCCATATTGGGGGGCATGTCCACATTGAATTACAGGATCGGCATGTTGACTATATGGACTTGACTTCGGGGGTTTAATTCTCAACTTTCCTTATTCACTTAAATTGTTATTTTGAATTTTTAATTTATTACATACCTTCGTTTTTTTTTATTTCATTGGTTTGGTGCACTAATTTTTCTTTCCTTCATTTTTA

Coding sequence (CDS)

ATGCAAGGCGCTGTTCTCTTGGCTGTACAAGCACAACCAGTCCGAGTAAAGTTGGCGAGGAGCATCAATTGCAATACCAGTAGTGGTCATCCGTCCGCCTCCGCAGGCTCAGGCACTCCAAGCCAGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATGAAGGAAATTGGACAAGACTTGGCAGAGTTCAAATGTGGCCTTGCTCATATCTTCTTGCAGCATACAAGTGCCTCTCTTACCATCAATGAAAACTATGATTCGGATGTTCGCAGCGATACTGAAACCTTCCTCAATAGGATAGTGCCTGAAGGGACATCTGCTCCTTGGAAGCATACACTTGAAGGTCCGGATGACATGCCAGCACATATTAAATCATCAATGTTTGGCTGTGCTCTCACGATTCCAATTACAAATGGAACGTTTAATATGGGTACTTGGCAGGGAATATGGCTTTGTGAGCACCGAGACCACCCCACTGCACGCAATGTTGTGGTCACCCTGAATGGAATTTAG

Protein sequence

MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTARNVVVTLNGI

Homology

[Close]

BLAST of MC11g0005.1 vs. ExPASy Swiss-Prot
Match: P0AF49 (UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.8e-35
Identity = 70/139 (50.36%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 50  WAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVR 109
           W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  VR
Sbjct: 2   WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVR 61

Query: 110 SDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIW 169
            D E F  R VP+  +  ++H  EG DDMP+HIKSSM G +L +P+  G    GTWQGIW
Sbjct: 62  HDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIW 121

Query: 170 LCEHRDHPTARNVVVTLNG 189
           L EHR H  +R ++ TL G
Sbjct: 122 LGEHRIHGGSRRIIATLQG 137

[Close]

BLAST of MC11g0005.1 vs. ExPASy Swiss-Prot
Match: P0AF48 (UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.8e-35
Identity = 70/139 (50.36%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 50  WAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVR 109
           W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  VR
Sbjct: 2   WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVR 61

Query: 110 SDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIW 169
            D E F  R VP+  +  ++H  EG DDMP+HIKSSM G +L +P+  G    GTWQGIW
Sbjct: 62  HDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIW 121

Query: 170 LCEHRDHPTARNVVVTLNG 189
           L EHR H  +R ++ TL G
Sbjct: 122 LGEHRIHGGSRRIIATLQG 137

[Close]

BLAST of MC11g0005.1 vs. ExPASy Swiss-Prot
Match: O14155 (UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4A8.02c PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.7e-33
Identity = 67/138 (48.55%), Postives = 97/138 (70.29%), Query Frame = 0


Query: 52  QKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSD 111
           Q+ +TL    +G ++IT  ++K++  +L  F  G  + F+QHTSA+LTINEN+D+D R+D
Sbjct: 5   QRIITLDRRSKGFYIITNDLVKKL-PELKSFSSGTVNFFIQHTSAALTINENWDADTRAD 64

Query: 112 TETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLC 171
               L++IVPE  SA ++HT EG DDMPAH+KSS+ G +LT+PITNG  ++GTWQ I L 
Sbjct: 65  MNDILDKIVPE--SAGYRHTAEGLDDMPAHVKSSLIGPSLTVPITNGKLSLGTWQDIQLA 124

Query: 172 EHRDHPTARNVVVTLNGI 190
           E R  P +R +V T+ G+
Sbjct: 125 EFRRQPHSRTIVCTIIGL 139

[Close]

BLAST of MC11g0005.1 vs. ExPASy Swiss-Prot
Match: P0A2L2 (UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-32
Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 50  WAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVR 109
           W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  VR
Sbjct: 2   WYQRTITLSEKPRGFHLITDEITDKL-SGLPPVETGLLHLLLLHTSASLTLNENCDPTVR 61

Query: 110 SDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIW 169
           +D E    + VP+  +A ++H  EG DDMP+HIKSS+ G +L +P+  G   +GTWQGIW
Sbjct: 62  ADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIW 121

Query: 170 LCEHRDHPTARNVVVTLNG 189
           L EHR H   R ++ TL G
Sbjct: 122 LGEHRIHGGPRKIIATLQG 137

[Close]

BLAST of MC11g0005.1 vs. ExPASy Swiss-Prot
Match: P0A2L1 (UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-32
Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 50  WAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVR 109
           W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  VR
Sbjct: 2   WYQRTITLSEKPRGFHLITDEITDKL-SGLPPVETGLLHLLLLHTSASLTLNENCDPTVR 61

Query: 110 SDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIW 169
           +D E    + VP+  +A ++H  EG DDMP+HIKSS+ G +L +P+  G   +GTWQGIW
Sbjct: 62  ADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIW 121

Query: 170 LCEHRDHPTARNVVVTLNG 189
           L EHR H   R ++ TL G
Sbjct: 122 LGEHRIHGGPRKIIATLQG 137

[Close]

BLAST of MC11g0005.1 vs. NCBI nr
Match: XP_022151749.1 (uncharacterized protein LOC111019630 isoform X1 [Momordica charantia])

HSP 1 Score: 390 bits (1001), Expect = 7.29e-137
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           NVVVTLNGI
Sbjct: 181 NVVVTLNGI 189

[Close]

BLAST of MC11g0005.1 vs. NCBI nr
Match: XP_022936473.1 (uncharacterized protein LOC111443082 [Cucurbita moschata] >XP_023521112.1 uncharacterized protein LOC111784738 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (877), Expect = 5.12e-118
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL  S N +T  G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLWSNNSST--GNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIG+DL+EFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNG FNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           N+VVTLNGI
Sbjct: 181 NIVVTLNGI 185

[Close]

BLAST of MC11g0005.1 vs. NCBI nr
Match: XP_022976235.1 (uncharacterized protein LOC111476694 [Cucurbita maxima])

HSP 1 Score: 342 bits (877), Expect = 5.12e-118
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL  S N +T  G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLGSNNSST--GNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIG DL+EFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGNDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNG FNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           N+VVTLNGI
Sbjct: 181 NIVVTLNGI 185

[Close]

BLAST of MC11g0005.1 vs. NCBI nr
Match: KAG6591177.1 (hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340 bits (873), Expect = 2.09e-117
Identity = 167/189 (88.36%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL      N+S+G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLW--RNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIG+DL+EFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNG FNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           N+VVTLNGI
Sbjct: 181 NIVVTLNGI 185

[Close]

BLAST of MC11g0005.1 vs. NCBI nr
Match: XP_008453044.1 (PREDICTED: UPF0047 protein YjbQ [Cucumis melo])

HSP 1 Score: 340 bits (871), Expect = 4.21e-117
Identity = 166/189 (87.83%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGA++LA  AQP+RVKL RS N +T  G+PSA+AGS  PS MAAAGPKWAQKTVTL PH
Sbjct: 1   MQGAIILA--AQPLRVKLLRSNNSST--GNPSATAGSSNPSLMAAAGPKWAQKTVTLSPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDL+EFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLN+IV
Sbjct: 61  RRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNKIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSS+FGCALTIPITNG FNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           N+VVTLNGI
Sbjct: 181 NIVVTLNGI 185

[Close]

BLAST of MC11g0005.1 vs. ExPASy TrEMBL
Match: A0A6J1DDZ9 (uncharacterized protein LOC111019630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019630 PE=3 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 3.53e-137
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           NVVVTLNGI
Sbjct: 181 NVVVTLNGI 189

[Close]

BLAST of MC11g0005.1 vs. ExPASy TrEMBL
Match: A0A6J1IIX0 (uncharacterized protein LOC111476694 OS=Cucurbita maxima OX=3661 GN=LOC111476694 PE=3 SV=1)

HSP 1 Score: 342 bits (877), Expect = 2.48e-118
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL  S N +T  G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLGSNNSST--GNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIG DL+EFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGNDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNG FNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           N+VVTLNGI
Sbjct: 181 NIVVTLNGI 185

[Close]

BLAST of MC11g0005.1 vs. ExPASy TrEMBL
Match: A0A6J1FDC5 (uncharacterized protein LOC111443082 OS=Cucurbita moschata OX=3662 GN=LOC111443082 PE=3 SV=1)

HSP 1 Score: 342 bits (877), Expect = 2.48e-118
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLA  AQP+RVKL  S N +T  G+PSA+AG+G PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLA--AQPLRVKLLWSNNSST--GNPSATAGAGNPSLMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIG+DL+EFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLN IV
Sbjct: 61  RRGCHLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNG FNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           N+VVTLNGI
Sbjct: 181 NIVVTLNGI 185

[Close]

BLAST of MC11g0005.1 vs. ExPASy TrEMBL
Match: A0A1S3BUP9 (UPF0047 protein YjbQ OS=Cucumis melo OX=3656 GN=LOC103493869 PE=3 SV=1)

HSP 1 Score: 340 bits (871), Expect = 2.04e-117
Identity = 166/189 (87.83%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGA++LA  AQP+RVKL RS N +T  G+PSA+AGS  PS MAAAGPKWAQKTVTL PH
Sbjct: 1   MQGAIILA--AQPLRVKLLRSNNSST--GNPSATAGSSNPSLMAAAGPKWAQKTVTLSPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDL+EFKCGLAHIFLQHTSASLTINENYDSDV+SDTETFLN+IV
Sbjct: 61  RRGCHLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNKIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQGIWLCEHRDHPTAR 180
           PEGTSAPWKHTLEGPDDMPAHIKSS+FGCALTIPITNG FNMGTWQGIWLCEHRDHPTAR
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKFNMGTWQGIWLCEHRDHPTAR 180

Query: 181 NVVVTLNGI 189
           N+VVTLNGI
Sbjct: 181 NIVVTLNGI 185

[Close]

BLAST of MC11g0005.1 vs. ExPASy TrEMBL
Match: A0A6J1DE78 (uncharacterized protein LOC111019630 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019630 PE=3 SV=1)

HSP 1 Score: 338 bits (867), Expect = 5.26e-117
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60
           MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120
           RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQ 166
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQ
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQ 166

[Close]

BLAST of MC11g0005.1 vs. TAIR 10
Match: AT1G21065.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). )

HSP 1 Score: 270.0 bits (689), Expect = 1.4e-72
Identity = 122/157 (77.71%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 33  ASAGSGTPSQMAAAGPKWAQKTVTLPPHRRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQ 92
           A+  +   S  +++G KWAQKT+TLPP RRGCHLITPKI+KEI +DL++F CGLAH+FLQ
Sbjct: 61  ANPATDRASMASSSGAKWAQKTITLPPLRRGCHLITPKILKEIREDLSDFNCGLAHVFLQ 120

Query: 93  HTSASLTINENYDSDVRSDTETFLNRIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT 152
           HTSASLTINENYD DV++DTETFLNRIVPEG SAPW+HT+EGPDDMPAHIKSSMFGC LT
Sbjct: 121 HTSASLTINENYDPDVQADTETFLNRIVPEGNSAPWRHTMEGPDDMPAHIKSSMFGCQLT 180

Query: 153 IPITNGTFNMGTWQGIWLCEHRDHPTARNVVVTLNGI 190
           IPIT G  +MGTWQGIWLCEHRD PTAR VVVTLNGI
Sbjct: 181 IPITKGKLSMGTWQGIWLCEHRDAPTARRVVVTLNGI 217

The following BLAST results are available for this feature:

BLAST of MC11g0005.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0AF49	6.8e-35	50.36	UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1	[more]
P0AF48	6.8e-35	50.36	UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1	[more]
O14155	3.7e-33	48.55	UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
P0A2L2	4.1e-32	48.20	UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1	[more]
P0A2L1	4.1e-32	48.20	UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700...	[more]

BLAST of MC11g0005.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151749.1	7.29e-137	100.00	uncharacterized protein LOC111019630 isoform X1 [Momordica charantia]	[more]
XP_022936473.1	5.12e-118	88.89	uncharacterized protein LOC111443082 [Cucurbita moschata] >XP_023521112.1 unchar...	[more]
XP_022976235.1	5.12e-118	88.89	uncharacterized protein LOC111476694 [Cucurbita maxima]	[more]
KAG6591177.1	2.09e-117	88.36	hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008453044.1	4.21e-117	87.83	PREDICTED: UPF0047 protein YjbQ [Cucumis melo]	[more]

BLAST of MC11g0005.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDZ9	3.53e-137	100.00	uncharacterized protein LOC111019630 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1IIX0	2.48e-118	88.89	uncharacterized protein LOC111476694 OS=Cucurbita maxima OX=3661 GN=LOC111476694...	[more]
A0A6J1FDC5	2.48e-118	88.89	uncharacterized protein LOC111443082 OS=Cucurbita moschata OX=3662 GN=LOC1114430...	[more]
A0A1S3BUP9	2.04e-117	87.83	UPF0047 protein YjbQ OS=Cucumis melo OX=3656 GN=LOC103493869 PE=3 SV=1	[more]
A0A6J1DE78	5.26e-117	100.00	uncharacterized protein LOC111019630 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of MC11g0005.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21065.1	1.4e-72	77.71	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001602	Uncharacterised protein family UPF0047	TIGRFAM	TIGR00149	TIGR00149	coord: 54..188 e-value: 6.1E-39 score: 130.8
IPR001602	Uncharacterised protein family UPF0047	PFAM	PF01894	UPF0047	coord: 67..185 e-value: 1.5E-37 score: 128.3
IPR001602	Uncharacterised protein family UPF0047	PANTHER	PTHR30615	UNCHARACTERIZED PROTEIN YJBQ-RELATED	coord: 13..189
IPR035917	YjbQ-like superfamily	GENE3D	2.60.120.460		coord: 41..188 e-value: 7.5E-48 score: 164.0
IPR035917	YjbQ-like superfamily	SUPERFAMILY	111038	YjbQ-like	coord: 50..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..46
None	No IPR available	PANTHER	PTHR30615:SF14	SUBFAMILY NOT NAMED	coord: 13..189

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC11g0005	MC11g0005	gene

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0005.1-utr3	MC11g0005.1-utr3-MC11:69647..70272	utr3

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0005.1-cds	MC11g0005.1-cds-MC11:70273..70344	CDS
MC11g0005.1-cds	MC11g0005.1-cds-MC11:83611..83653	CDS
MC11g0005.1-cds	MC11g0005.1-cds-MC11:83730..83784	CDS
MC11g0005.1-cds	MC11g0005.1-cds-MC11:84688..84721	CDS
MC11g0005.1-cds	MC11g0005.1-cds-MC11:84836..84930	CDS
MC11g0005.1-cds	MC11g0005.1-cds-MC11:85014..85074	CDS
MC11g0005.1-cds	MC11g0005.1-cds-MC11:85608..85817	CDS

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC11g0005.1-utr5	MC11g0005.1-utr5-MC11:85818..85957	utr5

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC11g0005.1	MC11g0005.1-protein	polypeptide