
MC09g_new0438.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCCTAACGCGTCAGCCCATCAGTTCATTCTCACCCCTTCTGCTCTCCACTCCGTTTACTGTGATGCCAAAGCATCAGATATTGAAGACGATGATGATATCATAGATTTGGGGCTCAGCCTCAGAACTTTGCAGCCAGATCAGGGCTGTTATGGTCCGCCGCCGGCTGCCGCCGCTGCACCGCTGCCACATTGTATGTATGCGGTGGCGGATTATTGTTGCTGCGGAGGAGAAGAGGCGGAAGGGGTGGTTGAGAGTAAGCTGCAGCGGTGGGCGTATGTGAAGGTAAATATGGATGGAGTGATTGTGGGCAGAAAAGTTTGCATCTTTCGACATTCTTCCTATTCTAGTCTTGCTCTTCAGCTTGAAGATATGTTTGGTAATTCATTCATCACTTTTTCCTTTTCCATGCTATTCTTCTTTTTTGTTCAATCAGATGGAGATTTAAATCTTCGATTTCAGAAACATCATTAGCAATACATCAATTTGGGTTATTTTTCTTGATTGGGTCTTGAGAGTATTTGATTTTAAATAAATGAGAGAATTCGAGACCATGATATATAAGATATGTGATCAAGCTAGAAATTTTCTTGAAATCTTACCTTTAAACATATTAACAAATTAGAGTACAAAAATAAAAATCTTTAGTGTGTAATTTTTTATTTTTTGGATTTATGACAAAACTCATTGCCATATCTCTTCGCTTTTTGTTTTGCCAGAGTGAGCTATTATCTTTTTGTTTGTTTTGGATTGTAAAAATTATACATGAATGTTAAAGATTTTAAATTGTTGTTTCTAAATATTTTTAAATTGAAAAGATAATGGATATAGGAAGTTAGGAGGTAAAAATTTACGTCATTTATAAAGAAATTTGACTTTATTTATTAATATATCTAGATGTGTAAGATCATCTCTTTCACAACATTGTATCTCTTCCTATAGAGTTTTGAAACTTTATGTAAGGAGAGTGAAGGCAAAATTAATTTTGGTGGGGAAGAGGGGACTACGATTATAACAAAGAAAGGCAAAAGACAAAAGCCCTTTATGTAGCATTCATCTTATGAAATAAATGAAAAAGGAACTACAAAATAATTATGAAATAATGAAAACAACAAATTATAAACAAGATCCTTTCTTGTTTTATTCTAAATTGTATTAATTAGCACAGCCAAAAAGATCTTCTTGAAAGATTGTCAACATAAGCTACATAGATCATCCATTAACGATGGTTCTTCTCTTATTTATATTTCGAGAAGAAATTGCTCGATTGGTCGATGTCAACAGTATATTAAAATCTTGATTATGTCTTTGTCCTTTAATTTAGATTTTTCCATCAAAATAATGTCTTTATACCTAATCAGAATTCTTATAATTACCATAAACGTCTTTGAGTGCTAAAATAATTGAGTACAAAATGGGCCTCTTGATCATATAGTGAATTGTCATGTTAGAATTTTCTTACTTGTCAATTATACTGGTAAGATTGACTAGTAGAGTTTAATTTGAATTAAATGATTGAGGTGATAATGGAAAATAATAATGTTATAGATTTTTCTATAATTTTTGCATCTCATCCCTCAGTTTGAGAGTAACTCAATGAATAAAGGGAGCAATTATCCTCCCCGTCGTCTTGATTTATATTAAGTAAAACACTCACATCTATGTTCAATGGTCGGATCAGGTCGACAGTGCGAATCTGGATTAAAGTTGTTTGAAACAGATTCGGAATATAATCTATTTTATAAAGGTGGAGACGAAATTTGGAGGAGCGTTGGCGATGTACCATGGAAGTAAGTTCTCTATCGTCATTGTTCATCATATATTTGTTCGGTTGACTCCATCAAACCGTTACATAATTTGTCTGTTTTTTGTTTGCAAATGGACATAGGCAGTTCGTAGAAGGTGTGAAGAGGCTAAGAATTGCTCGAAAAGATGAGGCTTTTGTTGTCATTCACCAAAATTAA ATGGACCCTAACGCGTCAGCCCATCAGTTCATTCTCACCCCTTCTGCTCTCCACTCCGTTTACTGTGATGCCAAAGCATCAGATATTGAAGACGATGATGATATCATAGATTTGGGGCTCAGCCTCAGAACTTTGCAGCCAGATCAGGGCTGTTATGGTCCGCCGCCGGCTGCCGCCGCTGCACCGCTGCCACATTGTATGTATGCGGTGGCGGATTATTGTTGCTGCGGAGGAGAAGAGGCGGAAGGGGTGGTTGAGAGTAAGCTGCAGCGGTGGGCGTATGTGAAGGTAAATATGGATGGAGTGATTGTGGGCAGAAAAGTTTGCATCTTTCGACATTCTTCCTATTCTAGTCTTGCTCTTCAGCTTGAAGATATGTTTGGTCGACAGTGCGAATCTGGATTAAAGTTGTTTGAAACAGATTCGGAATATAATCTATTTTATAAAGGTGGAGACGAAATTTGGAGGAGCGTTGGCGATGTACCATGGAAGCAGTTCGTAGAAGGTGTGAAGAGGCTAAGAATTGCTCGAAAAGATGAGGCTTTTGTTGTCATTCACCAAAATTAA ATGGACCCTAACGCGTCAGCCCATCAGTTCATTCTCACCCCTTCTGCTCTCCACTCCGTTTACTGTGATGCCAAAGCATCAGATATTGAAGACGATGATGATATCATAGATTTGGGGCTCAGCCTCAGAACTTTGCAGCCAGATCAGGGCTGTTATGGTCCGCCGCCGGCTGCCGCCGCTGCACCGCTGCCACATTGTATGTATGCGGTGGCGGATTATTGTTGCTGCGGAGGAGAAGAGGCGGAAGGGGTGGTTGAGAGTAAGCTGCAGCGGTGGGCGTATGTGAAGGTAAATATGGATGGAGTGATTGTGGGCAGAAAAGTTTGCATCTTTCGACATTCTTCCTATTCTAGTCTTGCTCTTCAGCTTGAAGATATGTTTGGTCGACAGTGCGAATCTGGATTAAAGTTGTTTGAAACAGATTCGGAATATAATCTATTTTATAAAGGTGGAGACGAAATTTGGAGGAGCGTTGGCGATGTACCATGGAAGCAGTTCGTAGAAGGTGTGAAGAGGCTAAGAATTGCTCGAAAAGATGAGGCTTTTGTTGTCATTCACCAAAATTAA MDPNASAHQFILTPSALHSVYCDAKASDIEDDDDIIDLGLSLRTLQPDQGCYGPPPAAAAAPLPHCMYAVADYCCCGGEEAEGVVESKLQRWAYVKVNMDGVIVGRKVCIFRHSSYSSLALQLEDMFGRQCESGLKLFETDSEYNLFYKGGDEIWRSVGDVPWKQFVEGVKRLRIARKDEAFVVIHQN Homology
BLAST of MC09g_new0438.1 vs. ExPASy Swiss-Prot
Match: Q8RYC6 (Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 4.1e-32 Identity = 81/197 (41.12%), Postives = 116/197 (58.88%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy Swiss-Prot
Match: Q9C5X0 (Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30 Identity = 67/147 (45.58%), Postives = 91/147 (61.90%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 7.5e-18 Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 7.5e-18 Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-16 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. NCBI nr
Match: XP_038893192.1 (auxin-responsive protein IAA32-like [Benincasa hispida]) HSP 1 Score: 216 bits (551), Expect = 1.19e-68 Identity = 114/170 (67.06%), Postives = 128/170 (75.29%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. NCBI nr
Match: XP_004135388.1 (auxin-responsive protein IAA32 [Cucumis sativus] >KGN52109.1 hypothetical protein Csa_008762 [Cucumis sativus]) HSP 1 Score: 211 bits (538), Expect = 1.32e-66 Identity = 116/177 (65.54%), Postives = 134/177 (75.71%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. NCBI nr
Match: XP_008446639.1 (PREDICTED: auxin-responsive protein IAA32 [Cucumis melo] >KAA0034586.1 auxin-responsive protein IAA32 [Cucumis melo var. makuwa] >TYK09138.1 auxin-responsive protein IAA32 [Cucumis melo var. makuwa]) HSP 1 Score: 211 bits (538), Expect = 1.56e-66 Identity = 116/177 (65.54%), Postives = 134/177 (75.71%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. NCBI nr
Match: XP_023513171.1 (auxin-responsive protein IAA32-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 211 bits (538), Expect = 3.09e-66 Identity = 123/197 (62.44%), Postives = 135/197 (68.53%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. NCBI nr
Match: KAG6601273.1 (Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 211 bits (538), Expect = 3.30e-66 Identity = 122/199 (61.31%), Postives = 135/199 (67.84%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy TrEMBL
Match: A0A0A0KT91 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G610430 PE=3 SV=1) HSP 1 Score: 211 bits (538), Expect = 6.41e-67 Identity = 116/177 (65.54%), Postives = 134/177 (75.71%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy TrEMBL
Match: A0A5D3CD62 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001290 PE=3 SV=1) HSP 1 Score: 211 bits (538), Expect = 7.55e-67 Identity = 116/177 (65.54%), Postives = 134/177 (75.71%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy TrEMBL
Match: A0A1S3BG83 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489310 PE=3 SV=1) HSP 1 Score: 211 bits (538), Expect = 7.55e-67 Identity = 116/177 (65.54%), Postives = 134/177 (75.71%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy TrEMBL
Match: A0A6J1J6Y8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1) HSP 1 Score: 211 bits (537), Expect = 2.34e-66 Identity = 124/200 (62.00%), Postives = 136/200 (68.00%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. ExPASy TrEMBL
Match: A0A6J1GYJ4 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1) HSP 1 Score: 210 bits (535), Expect = 4.41e-66 Identity = 121/199 (60.80%), Postives = 134/199 (67.34%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. TAIR 10
Match: AT2G01200.2 (indole-3-acetic acid inducible 32 ) HSP 1 Score: 139.4 bits (350), Expect = 2.9e-33 Identity = 81/197 (41.12%), Postives = 116/197 (58.88%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. TAIR 10
Match: AT1G15050.1 (indole-3-acetic acid inducible 34 ) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31 Identity = 67/147 (45.58%), Postives = 91/147 (61.90%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein ) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 ) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17 Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of MC09g_new0438.1 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 ) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17 Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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