MC09g_new0290.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0290.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC09: 13405600 .. 13410335 (+)
Sequence length	423
RNA-Seq Expression	MC09g_new0290.1
Synteny	MC09g_new0290.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGCTCCCTCTACTCCCTTTCTTCCTCTTCTCCCTCCCTTTGCTCTCTTTGCAAATATGATGGCATCGTGGCGGCAAAACAAAATCATGGTGATGACGATATGGAACAAATCTACGACGGTGCGTGACAACCCGAAACCCTCTTCAACAATGGCGGCGAGATACCGCAAACCCACGCCGGCACAGCGTGCGACGACCCAGAAATCCATGGCGGCAACTCCACCCCTCTCTAGTTTCTCTTGACAAATCCACGACAACCGATTTTTTCTTTTTAAGTTTTCATCTAATTTATGGGTTAGATGGATGATATTGAATCTCTTTTTCACTCTCTCTAAATTTGTCCAAATCAAAACAAACTGAAACTCAAATCTTTTAAAATCTTCATCTTCCTCTTTCTTTCTCCTCTGGTAAATTTTTTTGCTTCTAAGGTTGAAGGCTTTAGAAAGCAAAAACCCTAGACTTGGGATTAAAAAACATGAAAACGAAAACCTAGCTTAAAAAAAAACTAAATCCGAACCGACCCGAACATACCCGACTCGAACGAAAATCGAATAGTCTCGAGTCGGGTCGGTTTTGCATAGAAATCGACCCAAATCGACTAACTTACACCCCTATCAACAGGTATATGAGTAATCCAGGAAAGCAACATTGGGAGGCTGTGAAGTGGATATTCAGATACTTGAGGAAGATGCTGGTTATGCTTTGCACTTTAAAAGACCAGATTTTATACTGCAGGGATATGTAAATTGTTGGGACTTTCTCTACCTTAAAAAAAGATTAGAGACTCGTGCAAGCGCACACGGTCACAAGTAATACTTGGTAGTAATCCAAGGTTGAATCCTCAGGGACTTGTTGCTTTTCAAAACAGTTTTTAAGAAGTGAATGGTTCAAATACGCAATTGTGATTTAACAAGAAAAATGTGATGATATGTTGTTGTTTGGAGTTTTAACTAACAAGCAATTTAATGAAACTCAACCTACTTGTCTCCTACCTTAGTTTTGATGCAAATCATGGAAAACACACTATGTTGGGAAATGCACCAGGCGTAATTCCTGGCTTTTCTTAGGATTTTAGTTCTACACTTTCACTACCGCTTTTGGTTGCTGCAGAGGCTAGGGTAACCTACAATCATATTCTTATGTGTGATTACAATCCTAGAGAATATCTACCAACTCATTGCATTATGGGTCAGAGGGCCTATGCCTAGGATCATGTTTTATGCGCTTATTCCTAAGTCACATCCCATATTGGTTTCCTATTATTTTACCTAACTCACCTTTCCCAAGGTTGGGTTTTGGTGTATAAATCAAGTTTGCACTGGATAAATGGAAAAAAGACGTAAAGAGAAGTTTTTAGAAACCAACCCAAAAAAGTGTCAGGCACAATCTGGCCAAACTCTCGAGCTTGTTGAAAATCAAATCATTTGACTAAGACATTCCACAACGAGGTTGATAACTAATTTAGAACATAATTAAATGAAAGTAAATGCACGAAAACATAAAGAAAGTAATTTTCATTGAATTTAAATGAATAAATAAGTTGTACAAGGAGTACTAGCTTGACCCTCTTCTCCCTAGAGCGTGAGGGGAGTTGAAGCTCGCTAAAGAAATTTAAAAGAACAGAATGAGCGAAGAACGAAAGTAAAAACTAGAATTAAAAGCAATACGAAAGGTAAAAGCGTGAAAAACAAAGAAATGAACAACTAGAATATGAATATAAACCAAAACGTGTTCTACAACTATAGAGCAACTAAAAGAAGATGAAATGAAGCTTGGAAGAGATGATTTGCTGATGGAGGGATGACTTTCTTTTATAGCACCATAGGTGGGTTGAAACTCCACTCCATTTTAGGTGGAAATGGGTTGAGATTCACTTAACCACCTCACTTAGACTTGGACTCACGGTTTGAACATGTGGGAAATGTTCTCCTTACCTTTCATTAATCAAAACCTGCATTTTGACATTTTGTCCTCCAAAAATGCGCTGGGCGCAATTCTGCAAAAACAGAATTCTGTTATTTTTTTCCAACTTTGACCACATTTTTCTCATATTTATGCTAAAGTACCATAGTTTGACTTTTATGCAGAAATAATCTATGCATGTTCTACTTTAAGAATATGTGGTCCTTTTTGGCAAATAATAATGGGAAAGAGGTAAAAAACATGGTCAAACAGGTCTACCGACACATGTTTCTGCAATAAAAAGTCAACCCTAACATAGATGCAGATATGGCAGGGGATACAGATGGCAGAAAGAGTACTACCAGATATGTTTTTATGTTGGATAATACTGCGATTAGCTGGGTCTCCAACTTGCAGAAGATAGTAGCACTTTCTACTACAGAAGCTGAGTACGTTGTAGTTACTAAAGCAAGCAAAGAAATGATATGGCTTCAATCTTTCTTGGAAGAACTTGGCTTGAGATTAGGAAAATGAACTTTGCATTGTGACAGTCAGAGCGCTATTCATTTAGCGAAGAATCCAGTGTTTCATTCGAGAACGAAACACATACAGATAAGATACGATTTATCAGAACAACTTTGGAAGATAGAATGTTGTTGCTTGAAAAGATTCAAAGTTGTTAGAATCCAGTGGATATGTTTACCAAAGTCGTCTCTGTTGATAAATTGAAGCTGTGTGCAACTTCAGTTGGACTTCTCCACGACTAGAGAGGAGTCGCTACCGTTGTAGAGGAGACATATTGCTTGCTTTGTCTCCAAGTGGGAGATTATTGGGATTATGGAGCAAAACTAAGGAGAAAATTTTTTTCCTATAAAGAAAAGGTCCATTTAAATTTTTTCTTGTTGTATTTAGTTTGAATTTTTTTATTTTCCCATTCCCTTTTAGTTTTTGTCATACCATCTATTATAAATAAAGATAGATGGATCATTTGATTGGGGTGCACAAATAGAGAGTCATGACAAATTCTCCAAGAGAGAGTTTGAGAGCTAAATACTTGTATATCCGTTCGAGAGTTTGAAAGGCTTGTAGAGTGATTCGTGAGCTTTTTCTGTGTGAGGGAAAACTGAGAGAAATCATTTCTGCATTTTTCACAACATCACCTTAACAAAAACCACCTAGCTGGTAGGAACTACAAAAATACGATCCTAGTTCCTAAGAAACAAGAATAGAAAACCTCATAATACTTATGAGAACATATTACCATCCACCGCTCTAGAACCAAAGAACTCCCTTTTCTTCTATGCCGAAAAATAGCAGCCACCCTTTTTTTGTTTCTTTAACTCTCGACTAAACCAAGAAATAAGAAATGCTTACCTATATAAGTATACTGCGACAAACCTAAAATTGGTGAATAACTAAAGATAGTTGGGCCTTGTGTTTTCTAGGCCCAGCAACTTACAACAACCTCATCTTTTTTTTTTTCATTCTTTTCTTCTCTCATTAATTTTGGCTCCACCAATCCAAACAAACGTAAGCCACACGATATCGATTTTGAAAAGTTAAAGAAATAAAAACATAATCATGTTTATAAAATGAATCCTAAATAATCTTCGAGAGAATTCAAACCTACAACCTATAAGAAGAAATGCCTTTACCTAACGATCACTCATTGGTTGGTTTGTTTTTTTTTTTTTTGGAAACTCACTAATTTAGTGCTAGACTAAGAAGCAAAATACGATCGCTCGCTTTTATACTGAGGCAAAATACCGTTATATGGTTTCTATTACATGAAAATTAAAATGGTTGAATGGTCTACTTTTGAGTTTGGGAGTTCATCATCCAAAGACAAATATCTTTTTTCTATGATAGTTAGTTTGGAATAAACATAGTGTAGAATCTAATTTTCTATGAACGCACCAAACACATCAAAGTTGATTGTCAATTTGTTTTGGGATGCTATCAAATAAGGTCTAATTACATGATCTTATGTTCCAACATCGGCACAATTGGCCGATATTTTTACTAAGGTGTTGGGAAATGAACAATTTGATATTCTTTTTGGTAAGTTAGACATTTATGACTTGCATGCTCCCACTTGAAGGGGTGATACAATATTATTGTGTTTTATAATGTTTCCTTTCTTGATTTTGTTTTCTTATTCAGTTTAGACAAACGTGAAACTATTTTGTATATATGTATCATTTGAATCAATGAAAAATTAAGGGAAATATCTCAATTTGTCGGTTAATCAAGTGTCCCCTTAAATGTAGTTACAATTACATTATGAATAAATACTATTATTGTAGATATTAAATGGATTATAAAGCTAAAATATGGGAATGAGATTATGATAAGTGTTAAAAGGATCACCCAGGTTAAAAAGAGGACTTACTTAATAAGGGTTTATAATAGACATGGATACTCCTCTTATTGTCAATTGGTTTTGAGATGAAACTCATGAATATTTGAATATTTGATGTGGTATGAGAGTCCAATAAGATCAAATGAGCATGAGCAAGTAGTCCAAAAATAGAATCTCACCAAGATTGGTGAACCCGAAAGAAGGGACCTAACAAGGTTTTATAATAGGCATGAACTACTCATCTCATTATTAATTGCTTTTGAGTGTTACGATTGGTGGAGTTAAAACGACGTCGGATCGAGCTAGGGAAGAGTCGGGATTGAGCCTAGACATGTCGGGATCGAAGCGGGATGAAAACAGGGGAGAAGCGAGCGCTGCAGGCCACTCGGGTCGAGGAGGCAGTGCTGCGGCGCTGTCCAGATGGGGGAAGCAGGCGATTTCCGTCCGTAGCGCCATGGCGCTGTTTTGA

mRNA sequence

ATGCTCGCTCCCTCTACTCCCTTTCTTCCTCTTCTCCCTCCCTTTGCTCTCTTTGCAAATATGATGGCATCGTGGCGGCAAAACAAAATCATGGTGATGACGATATGGAACAAATCTACGACGGTGCGTGACAACCCGAAACCCTCTTCAACAATGGCGGCGAGATACCGCAAACCCACGCCGGCACAGCGTGCGACGACCCAGAAATCCATGGCGGCAACTCCACCCCTCTCTATTAAAACGACGTCGGATCGAGCTAGGGAAGAGTCGGGATTGAGCCTAGACATGTCGGGATCGAAGCGGGATGAAAACAGGGGAGAAGCGAGCGCTGCAGGCCACTCGGGTCGAGGAGGCAGTGCTGCGGCGCTGTCCAGATGGGGGAAGCAGGCGATTTCCGTCCGTAGCGCCATGGCGCTGTTTTGA

Coding sequence (CDS)

ATGCTCGCTCCCTCTACTCCCTTTCTTCCTCTTCTCCCTCCCTTTGCTCTCTTTGCAAATATGATGGCATCGTGGCGGCAAAACAAAATCATGGTGATGACGATATGGAACAAATCTACGACGGTGCGTGACAACCCGAAACCCTCTTCAACAATGGCGGCGAGATACCGCAAACCCACGCCGGCACAGCGTGCGACGACCCAGAAATCCATGGCGGCAACTCCACCCCTCTCTATTAAAACGACGTCGGATCGAGCTAGGGAAGAGTCGGGATTGAGCCTAGACATGTCGGGATCGAAGCGGGATGAAAACAGGGGAGAAGCGAGCGCTGCAGGCCACTCGGGTCGAGGAGGCAGTGCTGCGGCGCTGTCCAGATGGGGGAAGCAGGCGATTTCCGTCCGTAGCGCCATGGCGCTGTTTTGA

Protein sequence

MLAPSTPFLPLLPPFALFANMMASWRQNKIMVMTIWNKSTTVRDNPKPSSTMAARYRKPTPAQRATTQKSMAATPPLSIKTTSDRAREESGLSLDMSGSKRDENRGEASAAGHSGRGGSAAALSRWGKQAISVRSAMALF

Homology

The following BLAST results are available for this feature:

BLAST of MC09g_new0290.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0290.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0290.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0290.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..126

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC09g_new0290	MC09g_new0290	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC09g_new0290.1-cds	MC09g_new0290.1-cds-MC09:13405600..13405834	CDS
MC09g_new0290.1-cds	MC09g_new0290.1-cds-MC09:13410148..13410335	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC09g_new0290.1	MC09g_new0290.1-protein	polypeptide