MC09g_new0282.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0282.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ulp1-like peptidase
Location	MC09: 13090505 .. 13091591 (-)
Sequence length	714
RNA-Seq Expression	MC09g_new0282.1
Synteny	MC09g_new0282.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTAAAAGAATTCATCGAGTTGACGGACGATGAAAAGTTGTCCATTCATGCAATTCGGGGTCAATCACCTCCCAAACCATGTCTCTCAACCGTCAATGTTACACCTCATCATACACCAATCTTCAAAAAACAGGATGTGACGACAACCCATGAAGACTCAAATAACATTCTAGAGATGAAGGATGACTTGAAGGACCATGTCTTGGGGATAGACCTACTTCAAGTGAAACTTACATTAGTAAGTGTATTGGAAAATCAATGTGAGATGAAACATATGTTAGCCAACATATTAAAGAGCCTTAAGCGAGAAAACAGGTACGCAGTCCTAATTCGTTTAGGGATAAGACTGTTATTAGTGTTTACTTACTACTTATAGCCATGATATAGGTCGATGATGAAAAATGTGTACAACTTAAAACTTCTAATGATAAGGGTTTGCCTAAGGATGTTTCTACACCTAGTTGGTTAAGGATGCCTTTAGAAAATGATGATAAGGTTAGGATCGAAAATGAAAAATGTGTACAACCTTCCATTCGGTATCATGGAGATTCAGATGTGAAACTTACATTAGAAAGCGTATTGAAAAATCAATGTGAGATGAAACGTATGTTGGCAAGCATATTCAAGAGCCTTAGCGAGAAGAACAGGTACGCAGTCCTAATTCGTTTAGGGATAAGACTGTGACTAGTGTTTACTTACTACTTATTGTCATGAAATAGGTCGAGGATGAAAAATCTGTACAACTTAAAACTTCTAATGATAAGGGTTTGCCTAGGGATATTTCTGATGCTTCTACAGCTAGTTGGTTGAGGATGCCTTTAGAAGATGATGATAAGGTTAGGAACGAGGATGAAAAATGTGTACAACCTTCCATTCAATATCATGGAGATTCAGATGTGACTGAGATTGCACCATTTGTCGTTGTACGATCTAACGTTCGTCGTGCACGTAAGAGGCGTGTTAGTACTTGGATCTTAGATCCATTTACAACTTTCAAGAAGAAGATTGATATTAACAAAGTAGACCAAAGTTTGAAAGAAACTCAAATTTCGTACAATCCAATGTATAAAATAGTACAATAG

mRNA sequence

ATGGAAGTAAAAGAATTCATCGAGTTGACGGACGATGAAAAGTTGTCCATTCATGCAATTCGGGGTCAATCACCTCCCAAACCATGTCTCTCAACCGTCAATGTTACACCTCATCATACACCAATCTTCAAAAAACAGGATGTGACGACAACCCATGAAGACTCAAATAACATTCTAGAGATGAAGGATGACTTGAAGGACCATGTCTTGGGGATAGACCTACTTCAAGTGAAACTTACATTAGTCGATGATGAAAAATGTGTACAACTTAAAACTTCTAATGATAAGGGTTTGCCTAAGGATGTTTCTACACCTAGTTGGTTAAGGATGCCTTTAGAAAATGATGATAAGGTCGAGGATGAAAAATCTGTACAACTTAAAACTTCTAATGATAAGGGTTTGCCTAGGGATATTTCTGATGCTTCTACAGCTAGTTGGTTGAGGATGCCTTTAGAAGATGATGATAAGGTTAGGAACGAGGATGAAAAATGTGTACAACCTTCCATTCAATATCATGGAGATTCAGATGTGACTGAGATTGCACCATTTGTCGTTGTACGATCTAACGTTCGTCGTGCACGTAAGAGGCGTGTTAGTACTTGGATCTTAGATCCATTTACAACTTTCAAGAAGAAGATTGATATTAACAAAGTAGACCAAAGTTTGAAAGAAACTCAAATTTCGTACAATCCAATGTATAAAATAGTACAATAG

Coding sequence (CDS)

ATGGAAGTAAAAGAATTCATCGAGTTGACGGACGATGAAAAGTTGTCCATTCATGCAATTCGGGGTCAATCACCTCCCAAACCATGTCTCTCAACCGTCAATGTTACACCTCATCATACACCAATCTTCAAAAAACAGGATGTGACGACAACCCATGAAGACTCAAATAACATTCTAGAGATGAAGGATGACTTGAAGGACCATGTCTTGGGGATAGACCTACTTCAAGTGAAACTTACATTAGTCGATGATGAAAAATGTGTACAACTTAAAACTTCTAATGATAAGGGTTTGCCTAAGGATGTTTCTACACCTAGTTGGTTAAGGATGCCTTTAGAAAATGATGATAAGGTCGAGGATGAAAAATCTGTACAACTTAAAACTTCTAATGATAAGGGTTTGCCTAGGGATATTTCTGATGCTTCTACAGCTAGTTGGTTGAGGATGCCTTTAGAAGATGATGATAAGGTTAGGAACGAGGATGAAAAATGTGTACAACCTTCCATTCAATATCATGGAGATTCAGATGTGACTGAGATTGCACCATTTGTCGTTGTACGATCTAACGTTCGTCGTGCACGTAAGAGGCGTGTTAGTACTTGGATCTTAGATCCATTTACAACTTTCAAGAAGAAGATTGATATTAACAAAGTAGACCAAAGTTTGAAAGAAACTCAAATTTCGTACAATCCAATGTATAAAATAGTACAATAG

Protein sequence

MEVKEFIELTDDEKLSIHAIRGQSPPKPCLSTVNVTPHHTPIFKKQDVTTTHEDSNNILEMKDDLKDHVLGIDLLQVKLTLVDDEKCVQLKTSNDKGLPKDVSTPSWLRMPLENDDKVEDEKSVQLKTSNDKGLPRDISDASTASWLRMPLEDDDKVRNEDEKCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTWILDPFTTFKKKIDINKVDQSLKETQISYNPMYKIVQ

Homology

[Close]

BLAST of MC09g_new0282.1 vs. NCBI nr
Match: TYK28804.1 (uncharacterized protein E5676_scaffold303G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 9.77e-11
Identity = 55/155 (35.48%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 95  DKGLPKDVST---PSWLRMPLENDDKVEDEKSVQLKTSNDKGL---------PRDISDAS 154
           D    +DV T   P WLRMP E DD     K ++LK  +   +         P D+ +  
Sbjct: 96  DNAKTEDVDTGDTPHWLRMPKE-DDTSNRVKHIELKKDDTSNVVKFNIELEKPIDVLEKK 155

Query: 155 TASWLRMPLED-DDKVRNEDEKCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTW 214
               L  P++  DD+V  ED    +  ++ H DSDVTEI PF   R +VR AR++R S +
Sbjct: 156 VEIGLEEPIDVVDDEVEIED---TRKKLRTHFDSDVTEIEPFPTQRPHVRPARRKRASVY 215

Query: 215 ILDPFTTFKKKIDINKVDQSLKETQISYNPMYKIV 236
           +  PFTT  K+   +    S  E  I Y+PM+KI+
Sbjct: 216 LSTPFTTLPKRSTTSTTTTSQCEP-IVYDPMHKIL 245

[Close]

BLAST of MC09g_new0282.1 vs. NCBI nr
Match: KAA0045592.1 (uncharacterized protein E6C27_scaffold243G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 1.60e-10
Identity = 55/155 (35.48%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 95  DKGLPKDVST---PSWLRMPLENDDKVEDEKSVQLKTSNDKGL---------PRDISDAS 154
           D    +DV T   P WLRMP E DD     K ++LK  +   +         P D+ +  
Sbjct: 118 DNAKTEDVDTGDTPHWLRMPKE-DDTSNRVKHIELKKDDTSNVVKFNIELEKPIDVLEKK 177

Query: 155 TASWLRMPLED-DDKVRNEDEKCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTW 214
               L  P++  DD+V  ED    +  ++ H DSDVTEI PF   R +VR AR++R S +
Sbjct: 178 VEIGLEEPIDVVDDEVEIED---TRKKLRTHFDSDVTEIEPFPTQRPHVRPARRKRASVY 237

Query: 215 ILDPFTTFKKKIDINKVDQSLKETQISYNPMYKIV 236
           +  PFTT  K+   +    S  E  I Y+PM+KI+
Sbjct: 238 LSTPFTTLPKRSTTSTTTTSQCEP-IVYDPMHKIL 267

[Close]

BLAST of MC09g_new0282.1 vs. NCBI nr
Match: KAA0062032.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 3.01e-10
Identity = 56/177 (31.64%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 88  VQLKTSNDKGLPKDVS------TPSWLRMPLENDDKVEDEKSVQLKTSNDKGLPRDISDA 147
           +Q K  N+     DVS      TP+WLRMP E++        ++LK   DK    D+   
Sbjct: 312 LQRKVRNETVKCIDVSCFIFGVTPNWLRMPKEDE-------HIELKKKGDK----DVHTV 371

Query: 148 STASWLRMPLE----------------------DDDKVRNEDEKCVQPSIQYHGDSDVTE 207
            T  WLR  +E                       DD+V  ED +     ++ H D DV E
Sbjct: 372 GTPPWLRFNIELEKSIDVLEKKVDIGLEEPIDVVDDEVEIEDSR---KKLRTHFDEDVIE 431

Query: 208 IAPFVVVRSNVRRARKRRVSTWILDPFTTFKKKIDINKVDQSLKETQISYNPMYKIV 236
           I PF   R +VR  R++R S ++L PFTT  K+  +     + +   I Y+PMYKI+
Sbjct: 432 IEPFPTQRPHVRPTRRKRASIYLLTPFTTLPKR-SVTSTTTTSQSEPIVYDPMYKIL 473

[Close]

BLAST of MC09g_new0282.1 vs. NCBI nr
Match: KAA0055031.1 (uncharacterized protein E6C27_scaffold43052G001900 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 3.30e-10
Identity = 53/152 (34.87%), Postives = 76/152 (50.00%), Query Frame = 0


Query: 104 TPSWLRMPLENDDKVEDEKSVQLKTSNDKGLPRDISDASTASWLRMPLEDD--------- 163
           TP+WLRMP E DD     K ++LK   D+    D+    T  WLR  +E +         
Sbjct: 80  TPNWLRMPKE-DDTSNGAKHIELKKKGDE----DVHTVGTPPWLRFNIELEKPIDVLEKK 139

Query: 164 ---------DKVRNEDE-KCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTWILD 223
                    D V +E E +  +  ++ H DSDV EI PF+  R +VR AR++R S ++  
Sbjct: 140 VEIGLEEPIDVVNDEVEIEGSRKKLRTHFDSDVIEIEPFLTQRPHVRPARRKRASVYLST 199

Query: 224 PFTTFKKKIDINKVDQSLKETQISYNPMYKIV 236
           PFTT  K+   +    S  E  I Y+PM+KI+
Sbjct: 200 PFTTLPKRSMTSTTTTSQCEP-IVYDPMHKIL 225

[Close]

BLAST of MC09g_new0282.1 vs. NCBI nr
Match: KAA0062478.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 1.25e-09
Identity = 48/146 (32.88%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 95  DKGLPKDVST---PSWLRMPLENDDKVEDEKSVQLKTSNDKGLPRDISDASTASWLRMPL 154
           D    +DV T   P+WLRMP E++        ++LK   D+    D+ +      L+ P+
Sbjct: 331 DNAKTEDVDTGGTPNWLRMPKEDE-------HIELKKKGDE----DVLEKKVDIGLKEPI 390

Query: 155 ED-DDKVRNEDEKCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTWILDPFTTFK 214
           +  DD+V+ ED       ++ H D DVTEI PF+  + +VR AR++R S ++  PFTT  
Sbjct: 391 DVVDDEVQIEDSG---KKLRTHFDEDVTEIEPFLTQQPHVRPARRKRASVYLSTPFTTLP 450

Query: 215 KKIDINKVDQSLKETQISYNPMYKIV 236
           K+  +     + +   I Y+PM+KI+
Sbjct: 451 KR-SVTSTTSTSQSEPIVYDPMHKIL 461

[Close]

BLAST of MC09g_new0282.1 vs. ExPASy TrEMBL
Match: A0A5D3DZ72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00060 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.73e-11
Identity = 55/155 (35.48%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 95  DKGLPKDVST---PSWLRMPLENDDKVEDEKSVQLKTSNDKGL---------PRDISDAS 154
           D    +DV T   P WLRMP E DD     K ++LK  +   +         P D+ +  
Sbjct: 96  DNAKTEDVDTGDTPHWLRMPKE-DDTSNRVKHIELKKDDTSNVVKFNIELEKPIDVLEKK 155

Query: 155 TASWLRMPLED-DDKVRNEDEKCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTW 214
               L  P++  DD+V  ED    +  ++ H DSDVTEI PF   R +VR AR++R S +
Sbjct: 156 VEIGLEEPIDVVDDEVEIED---TRKKLRTHFDSDVTEIEPFPTQRPHVRPARRKRASVY 215

Query: 215 ILDPFTTFKKKIDINKVDQSLKETQISYNPMYKIV 236
           +  PFTT  K+   +    S  E  I Y+PM+KI+
Sbjct: 216 LSTPFTTLPKRSTTSTTTTSQCEP-IVYDPMHKIL 245

[Close]

BLAST of MC09g_new0282.1 vs. ExPASy TrEMBL
Match: A0A5A7TQF6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00970 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.76e-11
Identity = 55/155 (35.48%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 95  DKGLPKDVST---PSWLRMPLENDDKVEDEKSVQLKTSNDKGL---------PRDISDAS 154
           D    +DV T   P WLRMP E DD     K ++LK  +   +         P D+ +  
Sbjct: 118 DNAKTEDVDTGDTPHWLRMPKE-DDTSNRVKHIELKKDDTSNVVKFNIELEKPIDVLEKK 177

Query: 155 TASWLRMPLED-DDKVRNEDEKCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTW 214
               L  P++  DD+V  ED    +  ++ H DSDVTEI PF   R +VR AR++R S +
Sbjct: 178 VEIGLEEPIDVVDDEVEIED---TRKKLRTHFDSDVTEIEPFPTQRPHVRPARRKRASVY 237

Query: 215 ILDPFTTFKKKIDINKVDQSLKETQISYNPMYKIV 236
           +  PFTT  K+   +    S  E  I Y+PM+KI+
Sbjct: 238 LSTPFTTLPKRSTTSTTTTSQCEP-IVYDPMHKIL 267

[Close]

BLAST of MC09g_new0282.1 vs. ExPASy TrEMBL
Match: A0A5A7V1E3 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003680 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.46e-10
Identity = 56/177 (31.64%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 88  VQLKTSNDKGLPKDVS------TPSWLRMPLENDDKVEDEKSVQLKTSNDKGLPRDISDA 147
           +Q K  N+     DVS      TP+WLRMP E++        ++LK   DK    D+   
Sbjct: 312 LQRKVRNETVKCIDVSCFIFGVTPNWLRMPKEDE-------HIELKKKGDK----DVHTV 371

Query: 148 STASWLRMPLE----------------------DDDKVRNEDEKCVQPSIQYHGDSDVTE 207
            T  WLR  +E                       DD+V  ED +     ++ H D DV E
Sbjct: 372 GTPPWLRFNIELEKSIDVLEKKVDIGLEEPIDVVDDEVEIEDSR---KKLRTHFDEDVIE 431

Query: 208 IAPFVVVRSNVRRARKRRVSTWILDPFTTFKKKIDINKVDQSLKETQISYNPMYKIV 236
           I PF   R +VR  R++R S ++L PFTT  K+  +     + +   I Y+PMYKI+
Sbjct: 432 IEPFPTQRPHVRPTRRKRASIYLLTPFTTLPKR-SVTSTTTTSQSEPIVYDPMYKIL 473

[Close]

BLAST of MC09g_new0282.1 vs. ExPASy TrEMBL
Match: A0A5A7UN77 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001900 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.60e-10
Identity = 53/152 (34.87%), Postives = 76/152 (50.00%), Query Frame = 0


Query: 104 TPSWLRMPLENDDKVEDEKSVQLKTSNDKGLPRDISDASTASWLRMPLEDD--------- 163
           TP+WLRMP E DD     K ++LK   D+    D+    T  WLR  +E +         
Sbjct: 80  TPNWLRMPKE-DDTSNGAKHIELKKKGDE----DVHTVGTPPWLRFNIELEKPIDVLEKK 139

Query: 164 ---------DKVRNEDE-KCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTWILD 223
                    D V +E E +  +  ++ H DSDV EI PF+  R +VR AR++R S ++  
Sbjct: 140 VEIGLEEPIDVVNDEVEIEGSRKKLRTHFDSDVIEIEPFLTQRPHVRPARRKRASVYLST 199

Query: 224 PFTTFKKKIDINKVDQSLKETQISYNPMYKIV 236
           PFTT  K+   +    S  E  I Y+PM+KI+
Sbjct: 200 PFTTLPKRSMTSTTTTSQCEP-IVYDPMHKIL 225

[Close]

BLAST of MC09g_new0282.1 vs. ExPASy TrEMBL
Match: A0A5A7V4H4 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00700 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.04e-10
Identity = 48/146 (32.88%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 95  DKGLPKDVST---PSWLRMPLENDDKVEDEKSVQLKTSNDKGLPRDISDASTASWLRMPL 154
           D    +DV T   P+WLRMP E++        ++LK   D+    D+ +      L+ P+
Sbjct: 331 DNAKTEDVDTGGTPNWLRMPKEDE-------HIELKKKGDE----DVLEKKVDIGLKEPI 390

Query: 155 ED-DDKVRNEDEKCVQPSIQYHGDSDVTEIAPFVVVRSNVRRARKRRVSTWILDPFTTFK 214
           +  DD+V+ ED       ++ H D DVTEI PF+  + +VR AR++R S ++  PFTT  
Sbjct: 391 DVVDDEVQIEDSG---KKLRTHFDEDVTEIEPFLTQQPHVRPARRKRASVYLSTPFTTLP 450

Query: 215 KKIDINKVDQSLKETQISYNPMYKIV 236
           K+  +     + +   I Y+PM+KI+
Sbjct: 451 KR-SVTSTTSTSQSEPIVYDPMHKIL 461

The following BLAST results are available for this feature:

BLAST of MC09g_new0282.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0282.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28804.1	9.77e-11	35.48	uncharacterized protein E5676_scaffold303G00060 [Cucumis melo var. makuwa]	[more]
KAA0045592.1	1.60e-10	35.48	uncharacterized protein E6C27_scaffold243G00970 [Cucumis melo var. makuwa]	[more]
KAA0062032.1	3.01e-10	31.64	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0055031.1	3.30e-10	34.87	uncharacterized protein E6C27_scaffold43052G001900 [Cucumis melo var. makuwa]	[more]
KAA0062478.1	1.25e-09	32.88	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]

BLAST of MC09g_new0282.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DZ72	4.73e-11	35.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TQF6	7.76e-11	35.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V1E3	1.46e-10	31.64	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G0...	[more]
A0A5A7UN77	1.60e-10	34.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V4H4	6.04e-10	32.88	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G...	[more]

BLAST of MC09g_new0282.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..139

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC09g_new0282	MC09g_new0282	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC09g_new0282.1-cds	MC09g_new0282.1-cds-MC09:13090505..13090867	CDS
MC09g_new0282.1-cds	MC09g_new0282.1-cds-MC09:13091092..13091199	CDS
MC09g_new0282.1-cds	MC09g_new0282.1-cds-MC09:13091349..13091591	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC09g_new0282.1	MC09g_new0282.1-protein	polypeptide