MC09g1503.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1503.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	zinc finger protein GIS3
Location	MC09: 20897695 .. 20898360 (+)
Sequence length	666
RNA-Seq Expression	MC09g1503.1
Synteny	MC09g1503.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTTCCAAACAGAACAAAATCTCACCGCACCCACCACACGCTTAAAGCTAAAACTCTTCGGCTTCGACGTCCGGGAAGAGTTGGAAGAGGAAGATTCTGCCAAAACCCCAACTGGGTCGTCGGAATCCGGCGTCTTCACCCCCTCCGGCGACCGGAAATACGAGTGCCAATACTGCTGCCGTGAGTTCGCCAACTCCCAGGCCCTCGGCGGCCACCAAAACGCCCACAAGAAAGAAAGGCAGCAACTTAAGCGCGCCCAATTACAAGCCACTCGAAACGCCGCCGTTGCTTACGTCAGAAACCCGATCATCTCCGCCTTTGCTCCTCCGCCTCACCTTCTTGCCGCCGCCGCCTCCCCGCCGCCACCCATCATGCTCCCCAACCCAGCCGTCGCCGGGGCGTCGTCCTGGGTCTACATGCCGGCCGCCCGGACGCCGCCGCCGATACAAGTGACGTCACATGGGGCGGTGTTTCCGGCGGCGGTGGTGTCGTACGGCGGCGGGGTGGGGAACTCGATGGCATTGGCGGTGGGTTCTCCGGTGCACGGCCGGGCCGGGGATGGGCTGTCGTTGAACAGATTCCGGAATCAGGGAGATCATAATGGGGTTGAATTTGATGGAGCTTTTGGATTGGATTTGCATCTGAGATTGGCTCCGGCGGCGCCC

mRNA sequence

GAGTTCCAAACAGAACAAAATCTCACCGCACCCACCACACGCTTAAAGCTAAAACTCTTCGGCTTCGACGTCCGGGAAGAGTTGGAAGAGGAAGATTCTGCCAAAACCCCAACTGGGTCGTCGGAATCCGGCGTCTTCACCCCCTCCGGCGACCGGAAATACGAGTGCCAATACTGCTGCCGTGAGTTCGCCAACTCCCAGGCCCTCGGCGGCCACCAAAACGCCCACAAGAAAGAAAGGCAGCAACTTAAGCGCGCCCAATTACAAGCCACTCGAAACGCCGCCGTTGCTTACGTCAGAAACCCGATCATCTCCGCCTTTGCTCCTCCGCCTCACCTTCTTGCCGCCGCCGCCTCCCCGCCGCCACCCATCATGCTCCCCAACCCAGCCGTCGCCGGGGCGTCGTCCTGGGTCTACATGCCGGCCGCCCGGACGCCGCCGCCGATACAAGTGACGTCACATGGGGCGGTGTTTCCGGCGGCGGTGGTGTCGTACGGCGGCGGGGTGGGGAACTCGATGGCATTGGCGGTGGGTTCTCCGGTGCACGGCCGGGCCGGGGATGGGCTGTCGTTGAACAGATTCCGGAATCAGGGAGATCATAATGGGGTTGAATTTGATGGAGCTTTTGGATTGGATTTGCATCTGAGATTGGCTCCGGCGGCGCCC

Coding sequence (CDS)

GAGTTCCAAACAGAACAAAATCTCACCGCACCCACCACACGCTTAAAGCTAAAACTCTTCGGCTTCGACGTCCGGGAAGAGTTGGAAGAGGAAGATTCTGCCAAAACCCCAACTGGGTCGTCGGAATCCGGCGTCTTCACCCCCTCCGGCGACCGGAAATACGAGTGCCAATACTGCTGCCGTGAGTTCGCCAACTCCCAGGCCCTCGGCGGCCACCAAAACGCCCACAAGAAAGAAAGGCAGCAACTTAAGCGCGCCCAATTACAAGCCACTCGAAACGCCGCCGTTGCTTACGTCAGAAACCCGATCATCTCCGCCTTTGCTCCTCCGCCTCACCTTCTTGCCGCCGCCGCCTCCCCGCCGCCACCCATCATGCTCCCCAACCCAGCCGTCGCCGGGGCGTCGTCCTGGGTCTACATGCCGGCCGCCCGGACGCCGCCGCCGATACAAGTGACGTCACATGGGGCGGTGTTTCCGGCGGCGGTGGTGTCGTACGGCGGCGGGGTGGGGAACTCGATGGCATTGGCGGTGGGTTCTCCGGTGCACGGCCGGGCCGGGGATGGGCTGTCGTTGAACAGATTCCGGAATCAGGGAGATCATAATGGGGTTGAATTTGATGGAGCTTTTGGATTGGATTTGCATCTGAGATTGGCTCCGGCGGCGCCC

Protein sequence

EFQTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASPPPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSHGAVFPAAVVSYGGGVGNSMALAVGSPVHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP

Homology

[Close]

BLAST of MC09g1503.1 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-35
Identity = 116/255 (45.49%), Postives = 136/255 (53.33%), Query Frame = 0


Query: 5   EQNLTAPTTRLKLKLFGFDV-REELEEEDSAKT------------PTGSS--------ES 64
           E + ++ TT  +LKLFGF V  EE   + S KT            P GSS          
Sbjct: 3   ELDFSSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSR 62

Query: 65  GVFTPSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAV------- 124
           G     G+RKYECQYCCREF NSQALGGHQNAHKKERQQLKRAQLQATRNAA        
Sbjct: 63  GGGGGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGS 122

Query: 125 --AYVRNPIISAFAPPPHLLAAAASPPPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSH 184
              ++RNPI+SAFAPPPHLL+++A P P              W+Y+P  R  P     SH
Sbjct: 123 ASQFLRNPIVSAFAPPPHLLSSSAVPQPM----------GGPWMYLP--RVSPSQLHVSH 182

Query: 185 GAVFP-------AAVVSYGGGVGNSMALAVGSPV-HGRA-GDGLSLNRFRNQGDHNGVEF 221
           G V         A   SY  G  +S    VG+ + H +A G   S+N F  +    G  F
Sbjct: 183 GCVIQDGSGGAGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSRE---VGTTF 242

[Close]

BLAST of MC09g1503.1 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.5e-28
Identity = 96/215 (44.65%), Postives = 120/215 (55.81%), Query Frame = 0


Query: 12  TTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGG 71
           T    LKLFG ++ E    ++ +  P   S SG    S  RKYECQYCCREFANSQALGG
Sbjct: 3   TETSSLKLFGINLLETTSVQNQSSEPRPGSGSG----SESRKYECQYCCREFANSQALGG 62

Query: 72  HQNAHKKERQQLKRAQLQATRNAAVAY----VRNPIISAFAPPPHLLAAAASPPPPIMLP 131
           HQNAHKKERQ LKRAQ+ ATR     +      NP++SAFAP PHLL  +   PPP M+ 
Sbjct: 63  HQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLL--SQPHPPPHMML 122

Query: 132 NPAVAGASSWVYMPAARTPPPIQVTSHGAV--FPAAVVSYGGGVGNSMALAVGSPVHGRA 191
           +P+ + +S W+Y           ++S  AV  F      YGGG+  SMA  V    HG  
Sbjct: 123 SPS-SSSSKWLYGE--------HMSSQNAVGYFHGGRGLYGGGM-ESMAGEV--KTHG-- 182

Query: 192 GDGLSLNRFRNQGDH-NGVEFDGAFGLDLHLRLAP 220
           G    + RF    D  +G++ +   GLDLHL L P
Sbjct: 183 GSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of MC09g1503.1 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 3   QTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCRE 62
           +T ++ +  ++   +KLFGF++       +     + SS +   + +  +++ECQYC +E
Sbjct: 9   RTGESSSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKE 68

Query: 63  FANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRN---PIISAF 108
           FANSQALGGHQNAHKKER + KR QLQA R +   Y+ N   PI ++F
Sbjct: 69  FANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of MC09g1503.1 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.2e-10
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 17  LKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGHQNAH 76
           ++LFGF+     EE +S      ++ES +   + +++++C YC R F  SQALGGHQNAH
Sbjct: 19  IRLFGFEFGASHEESESKDNYNENNES-IKDDNKEKRFKCHYCFRNFPTSQALGGHQNAH 78

Query: 77  KKERQQLKRAQLQATRNAAVAYVR 101
           K+ERQQ KR  L +  NAA  + R
Sbjct: 79  KRERQQTKRFNLHS--NAAAFFHR 99

[Close]

BLAST of MC09g1503.1 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.8e-09
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 25  REELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLK 84
           +EE EEED     TG + +   + S +R++EC YC R F  SQALGGHQNAHK+ERQ  K
Sbjct: 66  KEEEEEEDQ----TGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAK 122

Query: 85  R 86
           R
Sbjct: 126 R 122

[Close]

BLAST of MC09g1503.1 vs. NCBI nr
Match: XP_022150620.1 (zinc finger protein GIS3 [Momordica charantia])

HSP 1 Score: 436 bits (1120), Expect = 7.85e-154
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   EFQTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCC 60
           EFQTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCC
Sbjct: 6   EFQTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCC 65

Query: 61  REFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASP 120
           REFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASP
Sbjct: 66  REFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASP 125

Query: 121 PPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSHGAVFPAAVVSYGGGVGNSMALAVGSP 180
           PPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSHGAVFPAAVVSYGGGVGNSMALAVGSP
Sbjct: 126 PPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSHGAVFPAAVVSYGGGVGNSMALAVGSP 185

Query: 181 VHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           VHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP
Sbjct: 186 VHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 227

[Close]

BLAST of MC09g1503.1 vs. NCBI nr
Match: XP_022985471.1 (zinc finger protein GIS3-like [Cucurbita maxima])

HSP 1 Score: 300 bits (768), Expect = 3.62e-100
Identity = 174/234 (74.36%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 1   EFQTEQNLTAPTT-RLKLKLFGFDVREELEEEDS--AKTPTGSSESGVFTPSGDRKYECQ 60
           +FQ++ N T PTT RLKLKLFGFDVREELE++DS  AKTPTGSSESGVFTPS DRKYECQ
Sbjct: 7   DFQSKPNHTTPTTTRLKLKLFGFDVREELEDDDSTTAKTPTGSSESGVFTPSADRKYECQ 66

Query: 61  YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAA 120
           YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLA A
Sbjct: 67  YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATA 126

Query: 121 ASPPPPIMLPNPAVAG-ASSWVYMPAARTPPPIQVTSHGAVFPAA--------VVSYGGG 180
              PP  +L NPA A   SSWVYMP  RTPPPIQV+SHG VFPA+        V SYG G
Sbjct: 127 ---PPHFLLSNPASAAETSSWVYMP--RTPPPIQVSSHGCVFPASGGGGKAAMVSSYGRG 186

Query: 181 VGNSMALAVGSPVHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           VGNSMA A+GS +H    +GLSL RF      NG  FD   GLDLHLRLAPAAP
Sbjct: 187 VGNSMAFAMGSQIHD---EGLSLKRFTK--GENGSGFDEGIGLDLHLRLAPAAP 230

[Close]

BLAST of MC09g1503.1 vs. NCBI nr
Match: XP_022968131.1 (zinc finger protein GIS3-like [Cucurbita maxima])

HSP 1 Score: 298 bits (763), Expect = 1.05e-99
Identity = 163/214 (76.17%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 13  TRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGH 72
           T  KLKLFGFDVREELEE+DSAKTPTGSSESGVFTPSGDRKYEC YCCREFANSQALGGH
Sbjct: 3   TFTKLKLFGFDVREELEEDDSAKTPTGSSESGVFTPSGDRKYECLYCCREFANSQALGGH 62

Query: 73  QNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASPPPPIMLPNPAVA 132
           QNAHKKER+QLKRAQLQATR+AAVAY+RNPIISAF+PPPHLLAA    PP  +LPN   A
Sbjct: 63  QNAHKKERKQLKRAQLQATRSAAVAYIRNPIISAFSPPPHLLAAGR--PPTFVLPNGGGA 122

Query: 133 GASSWVYMPAARTPPPIQVTSHGAVFPAAV----VSYGGGVGNSMALAVGSPVHGRAGDG 192
           G SSWVYM   RTPPPI V+SHG VFP AV     SYGGG+GNS+AL VGS V GR G+G
Sbjct: 123 GTSSWVYM--QRTPPPIHVSSHGCVFPTAVGGMGSSYGGGIGNSVALTVGSRVQGRGGEG 182

Query: 193 LSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           +SL RF      NG  FD   GLDLHLRLAPAAP
Sbjct: 183 MSLKRFTK--GENGSGFDDGIGLDLHLRLAPAAP 210

[Close]

BLAST of MC09g1503.1 vs. NCBI nr
Match: XP_022945845.1 (zinc finger protein GIS3-like [Cucurbita moschata] >XP_022945846.1 zinc finger protein GIS3-like [Cucurbita moschata] >KAG6573948.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013011.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297 bits (760), Expect = 3.01e-99
Identity = 162/214 (75.70%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 13  TRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGH 72
           T  KLKLFGFDVREELEE+DSAKTPTGSSESGVFTPSGDRKYEC YCCREFANSQALGGH
Sbjct: 3   TFTKLKLFGFDVREELEEDDSAKTPTGSSESGVFTPSGDRKYECLYCCREFANSQALGGH 62

Query: 73  QNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASPPPPIMLPNPAVA 132
           QNAHKKER+QLKRAQLQATR+AAVAY+RNP+ISAF+PPPHLLAA    PP  +LPN   A
Sbjct: 63  QNAHKKERKQLKRAQLQATRSAAVAYIRNPMISAFSPPPHLLAAGR--PPAFVLPNGGGA 122

Query: 133 GASSWVYMPAARTPPPIQVTSHGAVFPAAV----VSYGGGVGNSMALAVGSPVHGRAGDG 192
           G SSWVYM   RTPPPI V+SHG VFP AV     SYGGG+GNS+AL VGS V GR G+G
Sbjct: 123 GTSSWVYM--QRTPPPIHVSSHGCVFPTAVGGMGSSYGGGIGNSVALTVGSRVQGRGGEG 182

Query: 193 LSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           +SL RF      NG  FD   GLDLHLRLAPAAP
Sbjct: 183 MSLKRFTK--GENGSGFDDGIGLDLHLRLAPAAP 210

[Close]

BLAST of MC09g1503.1 vs. NCBI nr
Match: XP_023541295.1 (zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296 bits (758), Expect = 6.06e-99
Identity = 162/214 (75.70%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 13  TRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGH 72
           T  KLKLFGFDVREELEE+DSAKTPTGSSESGVFTPSGDRKYEC YCCREFANSQALGGH
Sbjct: 3   TFTKLKLFGFDVREELEEDDSAKTPTGSSESGVFTPSGDRKYECLYCCREFANSQALGGH 62

Query: 73  QNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASPPPPIMLPNPAVA 132
           QNAHKKER+QLKRAQLQATR+AAVAY+RNP+ISAF+PPPHLLAA    PP  +LPN   A
Sbjct: 63  QNAHKKERKQLKRAQLQATRSAAVAYIRNPMISAFSPPPHLLAAGR--PPAFVLPNGGGA 122

Query: 133 GASSWVYMPAARTPPPIQVTSHGAVFPAAV----VSYGGGVGNSMALAVGSPVHGRAGDG 192
           G SSWVYM   RTPPPI V+SHG VFP AV     SYGGG+GNS+AL VGS V GR G+G
Sbjct: 123 GTSSWVYM--QRTPPPIHVSSHGCVFPTAVGGMGSSYGGGMGNSVALTVGSRVQGRGGEG 182

Query: 193 LSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           +SL RF      NG  FD   GLDLHLRLAPAAP
Sbjct: 183 MSLKRFTK--GENGSGFDDGIGLDLHLRLAPAAP 210

[Close]

BLAST of MC09g1503.1 vs. ExPASy TrEMBL
Match: A0A6J1D8Z1 (zinc finger protein GIS3 OS=Momordica charantia OX=3673 GN=LOC111018716 PE=4 SV=1)

HSP 1 Score: 436 bits (1120), Expect = 3.80e-154
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   EFQTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCC 60
           EFQTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCC
Sbjct: 6   EFQTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCC 65

Query: 61  REFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASP 120
           REFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASP
Sbjct: 66  REFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASP 125

Query: 121 PPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSHGAVFPAAVVSYGGGVGNSMALAVGSP 180
           PPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSHGAVFPAAVVSYGGGVGNSMALAVGSP
Sbjct: 126 PPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSHGAVFPAAVVSYGGGVGNSMALAVGSP 185

Query: 181 VHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           VHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP
Sbjct: 186 VHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 227

[Close]

BLAST of MC09g1503.1 vs. ExPASy TrEMBL
Match: A0A6J1J893 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111483443 PE=4 SV=1)

HSP 1 Score: 300 bits (768), Expect = 1.76e-100
Identity = 174/234 (74.36%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 1   EFQTEQNLTAPTT-RLKLKLFGFDVREELEEEDS--AKTPTGSSESGVFTPSGDRKYECQ 60
           +FQ++ N T PTT RLKLKLFGFDVREELE++DS  AKTPTGSSESGVFTPS DRKYECQ
Sbjct: 7   DFQSKPNHTTPTTTRLKLKLFGFDVREELEDDDSTTAKTPTGSSESGVFTPSADRKYECQ 66

Query: 61  YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAA 120
           YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLA A
Sbjct: 67  YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATA 126

Query: 121 ASPPPPIMLPNPAVAG-ASSWVYMPAARTPPPIQVTSHGAVFPAA--------VVSYGGG 180
              PP  +L NPA A   SSWVYMP  RTPPPIQV+SHG VFPA+        V SYG G
Sbjct: 127 ---PPHFLLSNPASAAETSSWVYMP--RTPPPIQVSSHGCVFPASGGGGKAAMVSSYGRG 186

Query: 181 VGNSMALAVGSPVHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           VGNSMA A+GS +H    +GLSL RF      NG  FD   GLDLHLRLAPAAP
Sbjct: 187 VGNSMAFAMGSQIHD---EGLSLKRFTK--GENGSGFDEGIGLDLHLRLAPAAP 230

[Close]

BLAST of MC09g1503.1 vs. ExPASy TrEMBL
Match: A0A6J1HU09 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111467459 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 5.09e-100
Identity = 163/214 (76.17%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 13  TRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGH 72
           T  KLKLFGFDVREELEE+DSAKTPTGSSESGVFTPSGDRKYEC YCCREFANSQALGGH
Sbjct: 3   TFTKLKLFGFDVREELEEDDSAKTPTGSSESGVFTPSGDRKYECLYCCREFANSQALGGH 62

Query: 73  QNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASPPPPIMLPNPAVA 132
           QNAHKKER+QLKRAQLQATR+AAVAY+RNPIISAF+PPPHLLAA    PP  +LPN   A
Sbjct: 63  QNAHKKERKQLKRAQLQATRSAAVAYIRNPIISAFSPPPHLLAAGR--PPTFVLPNGGGA 122

Query: 133 GASSWVYMPAARTPPPIQVTSHGAVFPAAV----VSYGGGVGNSMALAVGSPVHGRAGDG 192
           G SSWVYM   RTPPPI V+SHG VFP AV     SYGGG+GNS+AL VGS V GR G+G
Sbjct: 123 GTSSWVYM--QRTPPPIHVSSHGCVFPTAVGGMGSSYGGGIGNSVALTVGSRVQGRGGEG 182

Query: 193 LSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           +SL RF      NG  FD   GLDLHLRLAPAAP
Sbjct: 183 MSLKRFTK--GENGSGFDDGIGLDLHLRLAPAAP 210

[Close]

BLAST of MC09g1503.1 vs. ExPASy TrEMBL
Match: A0A6J1G252 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111449965 PE=4 SV=1)

HSP 1 Score: 297 bits (760), Expect = 1.46e-99
Identity = 162/214 (75.70%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 13  TRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGH 72
           T  KLKLFGFDVREELEE+DSAKTPTGSSESGVFTPSGDRKYEC YCCREFANSQALGGH
Sbjct: 3   TFTKLKLFGFDVREELEEDDSAKTPTGSSESGVFTPSGDRKYECLYCCREFANSQALGGH 62

Query: 73  QNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAAASPPPPIMLPNPAVA 132
           QNAHKKER+QLKRAQLQATR+AAVAY+RNP+ISAF+PPPHLLAA    PP  +LPN   A
Sbjct: 63  QNAHKKERKQLKRAQLQATRSAAVAYIRNPMISAFSPPPHLLAAGR--PPAFVLPNGGGA 122

Query: 133 GASSWVYMPAARTPPPIQVTSHGAVFPAAV----VSYGGGVGNSMALAVGSPVHGRAGDG 192
           G SSWVYM   RTPPPI V+SHG VFP AV     SYGGG+GNS+AL VGS V GR G+G
Sbjct: 123 GTSSWVYM--QRTPPPIHVSSHGCVFPTAVGGMGSSYGGGIGNSVALTVGSRVQGRGGEG 182

Query: 193 LSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           +SL RF      NG  FD   GLDLHLRLAPAAP
Sbjct: 183 MSLKRFTK--GENGSGFDDGIGLDLHLRLAPAAP 210

[Close]

BLAST of MC09g1503.1 vs. ExPASy TrEMBL
Match: A0A6J1H115 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111458592 PE=4 SV=1)

HSP 1 Score: 293 bits (750), Expect = 2.57e-97
Identity = 170/234 (72.65%), Postives = 183/234 (78.21%), Query Frame = 0


Query: 1   EFQTEQNLTAPTT-RLKLKLFGFDVREELEEEDS--AKTPTGSSESGVFTPSGDRKYECQ 60
           + Q++ N T PTT RLKLKLFGFDVREELE++DS  AKTPTGSSESGVFTPS DRKYECQ
Sbjct: 36  DIQSKPNHTTPTTTRLKLKLFGFDVREELEDDDSTTAKTPTGSSESGVFTPSTDRKYECQ 95

Query: 61  YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLAAA 120
           YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLA A
Sbjct: 96  YCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATA 155

Query: 121 ASPPPPIMLPNPAVAG-ASSWVYMPAARTPPPIQVTSHGAVFPAA--------VVSYGGG 180
              PP  +L NPA A   SSWVYMP  RTPPPIQ++SHG  FPA+        V SYG G
Sbjct: 156 ---PPHFLLSNPASAPETSSWVYMP--RTPPPIQMSSHGCAFPASGGAGKAAMVSSYGRG 215

Query: 181 VGNSMALAVGSPVHGRAGDGLSLNRFRNQGDHNGVEFDGAFGLDLHLRLAPAAP 222
           VGNSMA A+GS +H    +G+SL RF      NG  FD   GLDLHLRLAPAAP
Sbjct: 216 VGNSMAFAMGSQIHD---EGISLKRFTK--GENGSGFDDGIGLDLHLRLAPAAP 259

[Close]

BLAST of MC09g1503.1 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-36
Identity = 116/255 (45.49%), Postives = 136/255 (53.33%), Query Frame = 0


Query: 5   EQNLTAPTTRLKLKLFGFDV-REELEEEDSAKT------------PTGSS--------ES 64
           E + ++ TT  +LKLFGF V  EE   + S KT            P GSS          
Sbjct: 3   ELDFSSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSR 62

Query: 65  GVFTPSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAV------- 124
           G     G+RKYECQYCCREF NSQALGGHQNAHKKERQQLKRAQLQATRNAA        
Sbjct: 63  GGGGGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGS 122

Query: 125 --AYVRNPIISAFAPPPHLLAAAASPPPPIMLPNPAVAGASSWVYMPAARTPPPIQVTSH 184
              ++RNPI+SAFAPPPHLL+++A P P              W+Y+P  R  P     SH
Sbjct: 123 ASQFLRNPIVSAFAPPPHLLSSSAVPQPM----------GGPWMYLP--RVSPSQLHVSH 182

Query: 185 GAVFP-------AAVVSYGGGVGNSMALAVGSPV-HGRA-GDGLSLNRFRNQGDHNGVEF 221
           G V         A   SY  G  +S    VG+ + H +A G   S+N F  +    G  F
Sbjct: 183 GCVIQDGSGGAGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSRE---VGTTF 242

[Close]

BLAST of MC09g1503.1 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 125.9 bits (315), Expect = 3.9e-29
Identity = 96/215 (44.65%), Postives = 120/215 (55.81%), Query Frame = 0


Query: 12  TTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGG 71
           T    LKLFG ++ E    ++ +  P   S SG    S  RKYECQYCCREFANSQALGG
Sbjct: 3   TETSSLKLFGINLLETTSVQNQSSEPRPGSGSG----SESRKYECQYCCREFANSQALGG 62

Query: 72  HQNAHKKERQQLKRAQLQATRNAAVAY----VRNPIISAFAPPPHLLAAAASPPPPIMLP 131
           HQNAHKKERQ LKRAQ+ ATR     +      NP++SAFAP PHLL  +   PPP M+ 
Sbjct: 63  HQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLL--SQPHPPPHMML 122

Query: 132 NPAVAGASSWVYMPAARTPPPIQVTSHGAV--FPAAVVSYGGGVGNSMALAVGSPVHGRA 191
           +P+ + +S W+Y           ++S  AV  F      YGGG+  SMA  V    HG  
Sbjct: 123 SPS-SSSSKWLYGE--------HMSSQNAVGYFHGGRGLYGGGM-ESMAGEV--KTHG-- 182

Query: 192 GDGLSLNRFRNQGDH-NGVEFDGAFGLDLHLRLAP 220
           G    + RF    D  +G++ +   GLDLHL L P
Sbjct: 183 GSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of MC09g1503.1 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 3   QTEQNLTAPTTRLKLKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCRE 62
           +T ++ +  ++   +KLFGF++       +     + SS +   + +  +++ECQYC +E
Sbjct: 9   RTGESSSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKE 68

Query: 63  FANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRN---PIISAF 108
           FANSQALGGHQNAHKKER + KR QLQA R +   Y+ N   PI ++F
Sbjct: 69  FANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of MC09g1503.1 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-11
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 17  LKLFGFDVREELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGHQNAH 76
           ++LFGF+     EE +S      ++ES +   + +++++C YC R F  SQALGGHQNAH
Sbjct: 19  IRLFGFEFGASHEESESKDNYNENNES-IKDDNKEKRFKCHYCFRNFPTSQALGGHQNAH 78

Query: 77  KKERQQLKRAQLQATRNAAVAYVR 101
           K+ERQQ KR  L +  NAA  + R
Sbjct: 79  KRERQQTKRFNLHS--NAAAFFHR 99

[Close]

BLAST of MC09g1503.1 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 7.0e-10
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 25  REELEEEDSAKTPTGSSESGVFTPSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLK 84
           +EE EEED     TG + +   + S +R++EC YC R F  SQALGGHQNAHK+ERQ  K
Sbjct: 66  KEEEEEEDQ----TGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAK 122

Query: 85  R 86
           R
Sbjct: 126 R 122

The following BLAST results are available for this feature:

BLAST of MC09g1503.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9H1	3.6e-35	45.49	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	5.5e-28	44.65	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q39264	2.9e-13	40.74	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	5.2e-10	44.05	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
Q84WI0	9.8e-09	54.10	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]

BLAST of MC09g1503.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150620.1	7.85e-154	100.00	zinc finger protein GIS3 [Momordica charantia]	[more]
XP_022985471.1	3.62e-100	74.36	zinc finger protein GIS3-like [Cucurbita maxima]	[more]
XP_022968131.1	1.05e-99	76.17	zinc finger protein GIS3-like [Cucurbita maxima]	[more]
XP_022945845.1	3.01e-99	75.70	zinc finger protein GIS3-like [Cucurbita moschata] >XP_022945846.1 zinc finger p...	[more]
XP_023541295.1	6.06e-99	75.70	zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC09g1503.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8Z1	3.80e-154	100.00	zinc finger protein GIS3 OS=Momordica charantia OX=3673 GN=LOC111018716 PE=4 SV=...	[more]
A0A6J1J893	1.76e-100	74.36	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111483443 PE=4 S...	[more]
A0A6J1HU09	5.09e-100	76.17	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111467459 PE=4 S...	[more]
A0A6J1G252	1.46e-99	75.70	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111449965 PE=4...	[more]
A0A6J1H115	2.57e-97	72.65	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111458592 PE=4...	[more]

BLAST of MC09g1503.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68360.1	2.5e-36	45.49	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	3.9e-29	44.65	zinc finger protein 6	[more]
AT1G10480.1	2.1e-14	40.74	zinc finger protein 5	[more]
AT5G06650.1	3.7e-11	44.05	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G58070.1	7.0e-10	54.10	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 38..101 e-value: 3.0E-8 score: 35.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..48
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 9..222
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 9..222
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 56..76
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 54..81 score: 11.572346
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 50..81

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC09g1503	MC09g1503	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC09g1503.1-cds	MC09g1503.1-cds-MC09:20897695..20898360	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC09g1503.1	MC09g1503.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding