MC08g2308.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2308.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Rubredoxin
Location	MC08: 31954358 .. 31954939 (-)
Sequence length	582
RNA-Seq Expression	MC08g2308.1
Synteny	MC08g2308.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCACCTCTCCCAACCTTCCCTTCCAATCCCCAGGCTCAACTTCAAACCCCCCACCGCCGCCGCCACCCCCGCCGCCATCGCGCCATTGCAGAGATCGGCGGCGGCGAGGCCCAGCTCCCTCTTCGCCCTCAACTCCATTGACGTCTCTAAAGAAGACAAGCCCACGTCCCACGAGCCAAATCCGCCGGCGGAAGAGGCGGCGGAGAAGTTCGACCCGCGGCGGCTGGAGGAGAAATTTGCAGTGCTGAACACAGGGATTTATGAGTGCAGGTCCTGTGGGCATAAATTCGACGAGGCGGTCGGAGACCCGTCGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGATTGGCGGTGCCCGACGTGCGGGGCGGCGAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCACAGAATCAGCAGTATGGACTTGGAGGGAACGCTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGTTTGTTGTTCTTCTTTGCTCTGTTTCTCTCTGGCTATTTCTTGCAA

mRNA sequence

GCGGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCACCTCTCCCAACCTTCCCTTCCAATCCCCAGGCTCAACTTCAAACCCCCCACCGCCGCCGCCACCCCCGCCGCCATCGCGCCATTGCAGAGATCGGCGGCGGCGAGGCCCAGCTCCCTCTTCGCCCTCAACTCCATTGACGTCTCTAAAGAAGACAAGCCCACGTCCCACGAGCCAAATCCGCCGGCGGAAGAGGCGGCGGAGAAGTTCGACCCGCGGCGGCTGGAGGAGAAATTTGCAGTGCTGAACACAGGGATTTATGAGTGCAGGTCCTGTGGGCATAAATTCGACGAGGCGGTCGGAGACCCGTCGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGATTGGCGGTGCCCGACGTGCGGGGCGGCGAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCACAGAATCAGCAGTATGGACTTGGAGGGAACGCTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGTTTGTTGTTCTTCTTTGCTCTGTTTCTCTCTGGCTATTTCTTGCAA

Coding sequence (CDS)

GCGGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCACCTCTCCCAACCTTCCCTTCCAATCCCCAGGCTCAACTTCAAACCCCCCACCGCCGCCGCCACCCCCGCCGCCATCGCGCCATTGCAGAGATCGGCGGCGGCGAGGCCCAGCTCCCTCTTCGCCCTCAACTCCATTGACGTCTCTAAAGAAGACAAGCCCACGTCCCACGAGCCAAATCCGCCGGCGGAAGAGGCGGCGGAGAAGTTCGACCCGCGGCGGCTGGAGGAGAAATTTGCAGTGCTGAACACAGGGATTTATGAGTGCAGGTCCTGTGGGCATAAATTCGACGAGGCGGTCGGAGACCCGTCGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGATTGGCGGTGCCCGACGTGCGGGGCGGCGAAGAGCTTCTTTGAGAGTAAGAGTGTGGAGATTGCTGGGTTTGCACAGAATCAGCAGTATGGACTTGGAGGGAACGCTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGTTTGTTGTTCTTCTTTGCTCTGTTTCTCTCTGGCTATTTCTTGCAA

Protein sequence

AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDVSKEDKPTSHEPNPPAEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ

Homology

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BLAST of MC08g2308.1 vs. ExPASy Swiss-Prot
Match: P73068 (Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.1e-19
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 88  EEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK 147
           E+  A L +  +ECR+CG+ +  + GD    ++PG PFE LP +W+CP CGA +++F S 
Sbjct: 7   EKTLAELASPNHECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNYFIST 66

Query: 148 SVEIA--GFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY 192
               A  GFA+N  YG G N ++ G+K +LI+GSL   F  FLS Y
Sbjct: 67  GETDAPSGFAENLNYGFGFNRMSGGKKNLLIFGSLFVIFLFFLSLY 112

[Close]

BLAST of MC08g2308.1 vs. ExPASy Swiss-Prot
Match: Q9XBL8 (Rubredoxin OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rub PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-18
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 92  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--K 151
           AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   
Sbjct: 5   AVENTVLDRFECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGP 64

Query: 152 SVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ 195
           +   +GF +N  YGLG N LT  QK +LI+G+L   F  F+S Y LQ
Sbjct: 65  AGTASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

[Close]

BLAST of MC08g2308.1 vs. ExPASy Swiss-Prot
Match: Q9WWN1 (Rubredoxin OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rub PE=3 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 92  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--K 151
           AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   
Sbjct: 5   AVENTVLDRFECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGP 64

Query: 152 SVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ 195
           +   +GF +N  YGLG N LT  QK +LI+G+L   F  F+S Y LQ
Sbjct: 65  AGTASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

[Close]

BLAST of MC08g2308.1 vs. ExPASy Swiss-Prot
Match: P00270 (Rubredoxin OS=Desulfovibrio gigas OX=879 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.0e-11
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 98  IYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK 148
           IY C  CG+++D A GDP   I PG  FE LP+DW CP CGA+K  FE +
Sbjct: 3   IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ 52

[Close]

BLAST of MC08g2308.1 vs. ExPASy Swiss-Prot
Match: Q9FDN6 (High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=hrb PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.1e-11
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 77  EAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPT 136
           + A  F   R ++K A L +  Y+C  C + +D   GDP + IAPG PF  LPEDW CP 
Sbjct: 160 KTAPTFTVGREKDKTA-LASPKYQCTICNYVYDPVQGDPEHGIAPGTPFADLPEDWTCPI 219

Query: 137 CGAAKSFFE 146
           CGA K  FE
Sbjct: 220 CGAGKDAFE 227

[Close]

BLAST of MC08g2308.1 vs. NCBI nr
Match: XP_038891199.1 (rubredoxin [Benincasa hispida])

HSP 1 Score: 331 bits (848), Expect = 3.32e-113
Identity = 173/204 (84.80%), Postives = 180/204 (88.24%), Query Frame = 0


Query: 1   AAYASARPTLSFHLSQPSLPIPRLNFKPPT----AAATPAAIAPLQRSAAARPSSLFALN 60
           AAY+SARPTLSFHLSQPSLPIPR NFKPP     AAAT  A+ PLQRSAAARP+S+F LN
Sbjct: 2   AAYSSARPTLSFHLSQPSLPIPRFNFKPPASASAAAATVPAVPPLQRSAAARPNSIFTLN 61

Query: 61  SIDVSKEDKPTSHEPNPP------AEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDE 120
           SIDVSKEDKPTS +PN P      A +  EKFD RRLEEKFAVLNTGIYECRSCGHKFDE
Sbjct: 62  SIDVSKEDKPTSDDPNTPSPPPVVAVDEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDE 121

Query: 121 AVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSG 180
           AVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSG
Sbjct: 122 AVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSG 181

Query: 181 QKAVLIYGSLLFFFALFLSGYFLQ 194
           QKAVLIYGSL FFFALFLSGYFLQ
Sbjct: 182 QKAVLIYGSLFFFFALFLSGYFLQ 205

[Close]

BLAST of MC08g2308.1 vs. NCBI nr
Match: ADN33910.1 (rubredoxin [Cucumis melo subsp. melo] >KAA0063629.1 rubredoxin [Cucumis melo var. makuwa] >TYK18397.1 rubredoxin [Cucumis melo var. makuwa])

HSP 1 Score: 325 bits (832), Expect = 7.13e-111
Identity = 168/201 (83.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDV 60
           A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDV
Sbjct: 2   AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIP----PLQRLSAARPISIFTLNSIDV 61

Query: 61  SKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTS +PN P+       E+  EKFD RRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 62  SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 121

Query: 121 DPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKA 180
           DP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKA
Sbjct: 122 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 181

Query: 181 VLIYGSLLFFFALFLSGYFLQ 194
           VLIYGSLLFFFALFLSGYFLQ
Sbjct: 182 VLIYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of MC08g2308.1 vs. NCBI nr
Match: XP_016901839.1 (PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo] >XP_016901842.1 PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo])

HSP 1 Score: 325 bits (832), Expect = 1.06e-109
Identity = 168/201 (83.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDV 60
           A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDV
Sbjct: 80  AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIP----PLQRLSAARPISIFTLNSIDV 139

Query: 61  SKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTS +PN P+       E+  EKFD RRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 140 SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 199

Query: 121 DPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKA 180
           DP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKA
Sbjct: 200 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 259

Query: 181 VLIYGSLLFFFALFLSGYFLQ 194
           VLIYGSLLFFFALFLSGYFLQ
Sbjct: 260 VLIYGSLLFFFALFLSGYFLQ 276

[Close]

BLAST of MC08g2308.1 vs. NCBI nr
Match: XP_004139218.2 (uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648770.1 uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648771.1 uncharacterized protein LOC101219075 [Cucumis sativus] >KGN60832.1 hypothetical protein Csa_019394 [Cucumis sativus])

HSP 1 Score: 320 bits (820), Expect = 5.34e-109
Identity = 170/202 (84.16%), Postives = 175/202 (86.63%), Query Frame = 0


Query: 1   AAYASARPT-LSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSID 60
           A Y+SARPT LSFHLSQPSLPIPR NFKPP  A   AAI PL RS+AARP S+F LNSID
Sbjct: 2   AVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPAT--AAIPPLLRSSAARPISIFTLNSID 61

Query: 61  VSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAV 120
           VSKEDKPTS +PN P        EE  EKFD RRLEEKFAVLNTGIYECRSCGHKFDEAV
Sbjct: 62  VSKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAV 121

Query: 121 GDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQK 180
           GDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQK
Sbjct: 122 GDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQK 181

Query: 181 AVLIYGSLLFFFALFLSGYFLQ 194
           AVLIYGSL FFFALFLSGYFLQ
Sbjct: 182 AVLIYGSLFFFFALFLSGYFLQ 201

[Close]

BLAST of MC08g2308.1 vs. NCBI nr
Match: XP_023545844.1 (uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313 bits (803), Expect = 1.94e-106
Identity = 164/201 (81.59%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 1   AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDV 60
           AAYASARPTLSFHLSQPS+P PR NFKPP  A       PLQRSAAARP  +F LNSIDV
Sbjct: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPPLVA-----FPPLQRSAAARPIPIFTLNSIDV 63

Query: 61  SKEDKPTSHEPN-------PPAEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTS +P+         AE A EK D RR+EEKFAVLNTGIYECRSCGHKFDEAVG
Sbjct: 64  SKEDKPTSEDPDLAAVVGEEAAEAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVG 123

Query: 121 DPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKA 180
           DP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKA
Sbjct: 124 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 183

Query: 181 VLIYGSLLFFFALFLSGYFLQ 194
           VLIYG+L FFFALFLSGYFLQ
Sbjct: 184 VLIYGTLFFFFALFLSGYFLQ 199

[Close]

BLAST of MC08g2308.1 vs. ExPASy TrEMBL
Match: A0A5A7VDM5 (Rubredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001210 PE=4 SV=1)

HSP 1 Score: 325 bits (832), Expect = 3.45e-111
Identity = 168/201 (83.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDV 60
           A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDV
Sbjct: 2   AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIP----PLQRLSAARPISIFTLNSIDV 61

Query: 61  SKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTS +PN P+       E+  EKFD RRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 62  SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 121

Query: 121 DPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKA 180
           DP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKA
Sbjct: 122 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 181

Query: 181 VLIYGSLLFFFALFLSGYFLQ 194
           VLIYGSLLFFFALFLSGYFLQ
Sbjct: 182 VLIYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of MC08g2308.1 vs. ExPASy TrEMBL
Match: E5GBR8 (Rubredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 325 bits (832), Expect = 3.45e-111
Identity = 168/201 (83.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDV 60
           A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDV
Sbjct: 2   AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIP----PLQRLSAARPISIFTLNSIDV 61

Query: 61  SKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTS +PN P+       E+  EKFD RRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 62  SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 121

Query: 121 DPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKA 180
           DP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKA
Sbjct: 122 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 181

Query: 181 VLIYGSLLFFFALFLSGYFLQ 194
           VLIYGSLLFFFALFLSGYFLQ
Sbjct: 182 VLIYGSLLFFFALFLSGYFLQ 198

[Close]

BLAST of MC08g2308.1 vs. ExPASy TrEMBL
Match: A0A1S4E0U3 (uncharacterized protein LOC103499548 OS=Cucumis melo OX=3656 GN=LOC103499548 PE=4 SV=1)

HSP 1 Score: 325 bits (832), Expect = 5.14e-110
Identity = 168/201 (83.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDV 60
           A Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +AARP S+F LNSIDV
Sbjct: 80  AVYSSARPTLSFHLSQPSLPIPRFNFKPPVAATIP----PLQRLSAARPISIFTLNSIDV 139

Query: 61  SKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVG 120
           SKEDKPTS +PN P+       E+  EKFD RRLEE+FAVLNTGIYECRSCGHKFDEAVG
Sbjct: 140 SKEDKPTSDDPNTPSPPPVVAVEKEEEKFDKRRLEERFAVLNTGIYECRSCGHKFDEAVG 199

Query: 121 DPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKA 180
           DP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKA
Sbjct: 200 DPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKA 259

Query: 181 VLIYGSLLFFFALFLSGYFLQ 194
           VLIYGSLLFFFALFLSGYFLQ
Sbjct: 260 VLIYGSLLFFFALFLSGYFLQ 276

[Close]

BLAST of MC08g2308.1 vs. ExPASy TrEMBL
Match: A0A0A0LJE4 (Rubredoxin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G012140 PE=4 SV=1)

HSP 1 Score: 320 bits (820), Expect = 2.58e-109
Identity = 170/202 (84.16%), Postives = 175/202 (86.63%), Query Frame = 0


Query: 1   AAYASARPT-LSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSID 60
           A Y+SARPT LSFHLSQPSLPIPR NFKPP  A   AAI PL RS+AARP S+F LNSID
Sbjct: 2   AVYSSARPTTLSFHLSQPSLPIPRFNFKPPIPAT--AAIPPLLRSSAARPISIFTLNSID 61

Query: 61  VSKEDKPTSHEPNPPA-------EEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAV 120
           VSKEDKPTS +PN P        EE  EKFD RRLEEKFAVLNTGIYECRSCGHKFDEAV
Sbjct: 62  VSKEDKPTSDDPNTPVPLPVVAVEEEEEKFDKRRLEEKFAVLNTGIYECRSCGHKFDEAV 121

Query: 121 GDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQK 180
           GDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQK
Sbjct: 122 GDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQK 181

Query: 181 AVLIYGSLLFFFALFLSGYFLQ 194
           AVLIYGSL FFFALFLSGYFLQ
Sbjct: 182 AVLIYGSLFFFFALFLSGYFLQ 201

[Close]

BLAST of MC08g2308.1 vs. ExPASy TrEMBL
Match: A0A6J1G4B1 (uncharacterized protein LOC111450624 OS=Cucurbita moschata OX=3662 GN=LOC111450624 PE=4 SV=1)

HSP 1 Score: 312 bits (800), Expect = 2.59e-106
Identity = 166/200 (83.00%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAARPSSLFALNSIDV 60
           AAYASARPTLSFHLSQPS+P PR NFKPP  A       PLQRSAAARP  +F LNSIDV
Sbjct: 4   AAYASARPTLSFHLSQPSVPSPRFNFKPPLVA-----FPPLQRSAAARPIPIFTLNSIDV 63

Query: 61  SKEDKPTSHEPNPPA---EEAA---EKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGD 120
           SKEDKPTS +P+  A   EEAA   EK D RR+EEKFAVLNTGIYECRSCGHKFDEAVGD
Sbjct: 64  SKEDKPTSDDPDFAAVVGEEAAAAEEKLDRRRMEEKFAVLNTGIYECRSCGHKFDEAVGD 123

Query: 121 PSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAV 180
           P+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAV
Sbjct: 124 PTYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNTLTSGQKAV 183

Query: 181 LIYGSLLFFFALFLSGYFLQ 194
           LIYG+L FFFALFLSGYFLQ
Sbjct: 184 LIYGTLFFFFALFLSGYFLQ 198

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BLAST of MC08g2308.1 vs. TAIR 10
Match: AT1G54500.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.8e-52
Identity = 100/150 (66.67%), Postives = 118/150 (78.67%), Query Frame = 0


Query: 45  AAARPSSLFALNSIDVSKEDKPTSHEPNPPAEEAAEKFDPRRLEEKFAVLNTGIYECRSC 104
           A +R  +   L+S D ++E +          +E  +  + RR+EEKFAVLNTGIYECRSC
Sbjct: 55  AVSRDDAATPLSSSDQTQETE---------TKEVEDTIEKRRMEEKFAVLNTGIYECRSC 114

Query: 105 GHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGG 164
           G+K+DE+ GDPSYPI PG  F++LPEDWRCPTCGAA+SFFESK VEIAGFAQNQQYGLGG
Sbjct: 115 GYKYDESAGDPSYPIPPGFQFDKLPEDWRCPTCGAAQSFFESKMVEIAGFAQNQQYGLGG 174

Query: 165 NALTSGQKAVLIYGSLLFFFALFLSGYFLQ 195
           NALTSGQK  LI+GSLL FFALFLSGYF+Q
Sbjct: 175 NALTSGQKTGLIFGSLLLFFALFLSGYFIQ 195

The following BLAST results are available for this feature:

BLAST of MC08g2308.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P73068	9.1e-19	43.40	Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=...	[more]
Q9XBL8	7.7e-18	45.79	Rubredoxin OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=...	[more]
Q9WWN1	1.3e-17	45.79	Rubredoxin OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=...	[more]
P00270	7.0e-11	54.00	Rubredoxin OS=Desulfovibrio gigas OX=879 PE=1 SV=1	[more]
Q9FDN6	9.1e-11	46.38	High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073 / ...	[more]

BLAST of MC08g2308.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891199.1	3.32e-113	84.80	rubredoxin [Benincasa hispida]	[more]
ADN33910.1	7.13e-111	83.58	rubredoxin [Cucumis melo subsp. melo] >KAA0063629.1 rubredoxin [Cucumis melo var...	[more]
XP_016901839.1	1.06e-109	83.58	PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo] >XP_016901842.1 P...	[more]
XP_004139218.2	5.34e-109	84.16	uncharacterized protein LOC101219075 [Cucumis sativus] >XP_011648770.1 uncharact...	[more]
XP_023545844.1	1.94e-106	81.59	uncharacterized protein LOC111805157 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC08g2308.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDM5	3.45e-111	83.58	Rubredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001210 PE...	[more]
E5GBR8	3.45e-111	83.58	Rubredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S4E0U3	5.14e-110	83.58	uncharacterized protein LOC103499548 OS=Cucumis melo OX=3656 GN=LOC103499548 PE=...	[more]
A0A0A0LJE4	2.58e-109	84.16	Rubredoxin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G01...	[more]
A0A6J1G4B1	2.59e-106	83.00	uncharacterized protein LOC111450624 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]

BLAST of MC08g2308.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54500.1	3.8e-52	66.67	Rubredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024935	Rubredoxin domain	PRINTS	PR00163	RUBREDOXIN	coord: 128..144 score: 57.12 coord: 98..114 score: 44.12
IPR024935	Rubredoxin domain	PFAM	PF00301	Rubredoxin	coord: 99..144 e-value: 1.0E-17 score: 63.9
IPR024935	Rubredoxin domain	CDD	cd00730	rubredoxin	coord: 99..145 e-value: 5.12203E-23 score: 85.0502
None	No IPR available	GENE3D	2.20.28.10		coord: 91..146 e-value: 8.2E-22 score: 78.6
None	No IPR available	PIRSR	PIRSR000071-1	PIRSR000071-1	coord: 99..146 e-value: 8.0E-19 score: 65.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..82
None	No IPR available	PANTHER	PTHR47627	RUBREDOXIN	coord: 2..194
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 95..161
IPR018527	Rubredoxin, iron-binding site	PROSITE	PS00202	RUBREDOXIN	coord: 128..138
IPR024934	Rubredoxin-like domain	PROSITE	PS50903	RUBREDOXIN_LIKE	coord: 96..147 score: 13.153681

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC08g2308	MC08g2308	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC08g2308.1-cds	MC08g2308.1-cds-MC08:31954358..31954939	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC08g2308.1	MC08g2308.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043448	alkane catabolic process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0010207	photosystem II assembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009055	electron transfer activity