MC07g0766.1 (mRNA) Bitter gourd (Dali-11) v1

Overview
NameMC07g0766.1
TypemRNA
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC07: 15345233 .. 15345373 (-)
Sequence length141
RNA-Seq ExpressionMC07g0766.1
SyntenyMC07g0766.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGGAATTGTTCTCTTTTTTAAACTAAATGAAAGCAGGACAGGACTTTTAACAACTGCTGCGGATTCCCAACCTAATTTGTTGACAAAGAAATCCATTCCCAACATAATTTTCTCCTCTGATAGTGTCATACACCATGGA

mRNA sequence

CTTGGAATTGTTCTCTTTTTTAAACTAAATGAAAGCAGGACAGGACTTTTAACAACTGCTGCGGATTCCCAACCTAATTTGTTGACAAAGAAATCCATTCCCAACATAATTTTCTCCTCTGATAGTGTCATACACCATGGA

Coding sequence (CDS)

CTTGGAATTGTTCTCTTTTTTAAACTAAATGAAAGCAGGACAGGACTTTTAACAACTGCTGCGGATTCCCAACCTAATTTGTTGACAAAGAAATCCATTCCCAACATAATTTTCTCCTCTGATAGTGTCATACACCATGGA

Protein sequence

LGIVLFFKLNESRTGLLTTAADSQPNLLTKKSIPNIIFSSDSVIHHG
Homology
[Close]
BLAST of MC07g0766.1 vs. NCBI nr
Match: CBI26089.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 46.2 bits (108), Expect = 2.15e-04
Identity = 26/46 (56.52%), Postives = 29/46 (63.04%), Query Frame = 0 

Query: 2  GIVLFFKLNESRTGLLTTAADSQPNLLTKKSIPNIIFSSDSVIHHG 47
          GI+LF KL E  TG      DS P LLTKKSI  II SS+ +IH G
Sbjct: 16 GIILFSKLCEISTGRRAIKEDSLPILLTKKSIVVIILSSEYIIHQG 61

[Close]
BLAST of MC07g0766.1 vs. NCBI nr
Match: CBI32250.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 44.7 bits (104), Expect = 2.26e-04
Identity = 24/45 (53.33%), Postives = 27/45 (60.00%), Query Frame = 0 

Query: 3  IVLFFKLNESRTGLLTTAADSQPNLLTKKSIPNIIFSSDSVIHHG 47
          ++ F KL     G L   A SQP LLTKKSI  IIF SD +IH G
Sbjct: 1  MIFFSKLRIKTVGYLAIVAGSQPILLTKKSITLIIFFSDDLIHKG 45

[Close]
BLAST of MC07g0766.1 vs. ExPASy TrEMBL
Match: M5XZP3 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015929mg PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 8.28e-06
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0 

Query: 1  LGIVLFFKLNESRTGLLTTAADSQPNLLTKKSIPNIIFSSDSVIHHG 47
          LGI+LF KL    TG +    +  P L TKK IP IIFSSD ++H G
Sbjct: 8  LGIILFSKLKHKITGYVAITLEGHPILFTKKFIPCIIFSSDRIMHCG 54

[Close]
BLAST of MC07g0766.1 vs. ExPASy TrEMBL
Match: M5XGP0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa015555mg PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.85e-05
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0 

Query: 1  LGIVLFFKLNESRTGLLTTAADSQPNLLTKKSIPNIIFSSDSVIHHG 47
          LGI+LF KL    TG +    +  P L TKK IP IIFSSD ++H G
Sbjct: 34 LGIILFSKLKHKITGYVAITLEGHPILFTKKFIPCIIFSSDRIMHCG 80

[Close]
BLAST of MC07g0766.1 vs. ExPASy TrEMBL
Match: D7T6G8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01620 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.04e-04
Identity = 26/46 (56.52%), Postives = 29/46 (63.04%), Query Frame = 0 

Query: 2  GIVLFFKLNESRTGLLTTAADSQPNLLTKKSIPNIIFSSDSVIHHG 47
          GI+LF KL E  TG      DS P LLTKKSI  II SS+ +IH G
Sbjct: 16 GIILFSKLCEISTGRRAIKEDSLPILLTKKSIVVIILSSEYIIHQG 61

The following BLAST results are available for this feature:
BLAST of MC07g0766.1 vs.
Match NameE-valueIdentityDescription
BLAST of MC07g0766.1 vs. NCBI nr
Match NameE-valueIdentityDescription
CBI26089.32.15e-0456.52unnamed protein product, partial [Vitis vinifera][more]
CBI32250.32.26e-0453.33unnamed protein product, partial [Vitis vinifera][more]
BLAST of MC07g0766.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
M5XZP38.28e-0651.06Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015929m... [more]
M5XGP01.85e-0551.06Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa015555mg PE=4 SV=1[more]
D7T6G81.04e-0456.52Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01620 PE=4 SV=... [more]
BLAST of MC07g0766.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MC07g0766MC07g0766gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MC07g0766.1-cdsMC07g0766.1-cds-MC07:15345233..15345373CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MC07g0766.1MC07g0766.1-proteinpolypeptide