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MC05g0525.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACTCTTCATTTTGTTCCATCCGCTTTCTCTCCACTAAAACAAAAGCAACCCACAAAGCTTTCCTCTGTTTTCAAGCTCAGACCCACAACCCAGATCGGCTTACGGCGGCGGTTGCTCGTCCGATCGTACAAAGTGGTGATTGAGCACGAGGGGCAGAGCACCGAGCTGGAGGTTGAAGACGACGAGAGCATATTGAGCAGCGCATTGGATTCTGGCTTGTCCGTGCCCCACGATTGCAAGCTTGGTGTGTGCATGACTTGCCCTGCTCGCCTTGTCAGCGGCGCCGTCGATCAGAGCGAAGGAATGCTCAGCGATGATGTTGTGGAGCGCGGCTATGCGCTTCTCTGTGTGGCTTATCCCCGCTCCGACTGCCACATTAAGACCATCCCTGAGGAGGAGTTACTGGCCCTTCAATTAGCCACAGCTAATGAC ATGGCAACTCTTCATTTTGTTCCATCCGCTTTCTCTCCACTAAAACAAAAGCAACCCACAAAGCTTTCCTCTGTTTTCAAGCTCAGACCCACAACCCAGATCGGCTTACGGCGGCGGTTGCTCGTCCGATCGTACAAAGTGGTGATTGAGCACGAGGGGCAGAGCACCGAGCTGGAGGTTGAAGACGACGAGAGCATATTGAGCAGCGCATTGGATTCTGGCTTGTCCGTGCCCCACGATTGCAAGCTTGGTGTGTGCATGACTTGCCCTGCTCGCCTTGTCAGCGGCGCCGTCGATCAGAGCGAAGGAATGCTCAGCGATGATGTTGTGGAGCGCGGCTATGCGCTTCTCTGTGTGGCTTATCCCCGCTCCGACTGCCACATTAAGACCATCCCTGAGGAGGAGTTACTGGCCCTTCAATTAGCCACAGCTAATGAC ATGGCAACTCTTCATTTTGTTCCATCCGCTTTCTCTCCACTAAAACAAAAGCAACCCACAAAGCTTTCCTCTGTTTTCAAGCTCAGACCCACAACCCAGATCGGCTTACGGCGGCGGTTGCTCGTCCGATCGTACAAAGTGGTGATTGAGCACGAGGGGCAGAGCACCGAGCTGGAGGTTGAAGACGACGAGAGCATATTGAGCAGCGCATTGGATTCTGGCTTGTCCGTGCCCCACGATTGCAAGCTTGGTGTGTGCATGACTTGCCCTGCTCGCCTTGTCAGCGGCGCCGTCGATCAGAGCGAAGGAATGCTCAGCGATGATGTTGTGGAGCGCGGCTATGCGCTTCTCTGTGTGGCTTATCCCCGCTCCGACTGCCACATTAAGACCATCCCTGAGGAGGAGTTACTGGCCCTTCAATTAGCCACAGCTAATGAC MATLHFVPSAFSPLKQKQPTKLSSVFKLRPTTQIGLRRRLLVRSYKVVIEHEGQSTELEVEDDESILSSALDSGLSVPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVERGYALLCVAYPRSDCHIKTIPEEELLALQLATAND Homology
BLAST of MC05g0525.1 vs. ExPASy Swiss-Prot
Match: O23344 (Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC1 PE=1 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 9.5e-45 Identity = 84/108 (77.78%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy Swiss-Prot
Match: P00252 (Ferredoxin-1 OS=Desmonostoc muscorum OX=1179 PE=1 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 4.8e-20 Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy Swiss-Prot
Match: P00248 (Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 4.8e-20 Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy Swiss-Prot
Match: P14937 (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19 Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.1e-19 Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of MC05g0525.1 vs. NCBI nr
Match: XP_022138084.1 (uncharacterized protein LOC111009341 [Momordica charantia]) HSP 1 Score: 289 bits (740), Expect = 1.78e-98 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of MC05g0525.1 vs. NCBI nr
Match: XP_023526556.1 (uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 259 bits (662), Expect = 1.45e-86 Identity = 131/147 (89.12%), Postives = 139/147 (94.56%), Query Frame = 0
BLAST of MC05g0525.1 vs. NCBI nr
Match: XP_022956084.1 (uncharacterized protein LOC111457884 [Cucurbita moschata] >KAG7018707.1 petF2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 258 bits (660), Expect = 2.92e-86 Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0
BLAST of MC05g0525.1 vs. NCBI nr
Match: XP_022979429.1 (uncharacterized protein LOC111479154 [Cucurbita maxima]) HSP 1 Score: 256 bits (655), Expect = 2.37e-85 Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0
BLAST of MC05g0525.1 vs. NCBI nr
Match: KAG6582296.1 (Ferredoxin C 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 256 bits (654), Expect = 1.95e-83 Identity = 130/147 (88.44%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy TrEMBL
Match: A0A6J1C929 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111009341 PE=3 SV=1) HSP 1 Score: 289 bits (740), Expect = 8.62e-99 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy TrEMBL
Match: A0A6J1GY17 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111457884 PE=3 SV=1) HSP 1 Score: 258 bits (660), Expect = 1.41e-86 Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy TrEMBL
Match: A0A6J1IWL8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111479154 PE=3 SV=1) HSP 1 Score: 256 bits (655), Expect = 1.15e-85 Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy TrEMBL
Match: A0A0A0L4U6 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G146700 PE=3 SV=1) HSP 1 Score: 244 bits (624), Expect = 3.93e-81 Identity = 127/147 (86.39%), Postives = 134/147 (91.16%), Query Frame = 0
BLAST of MC05g0525.1 vs. ExPASy TrEMBL
Match: A0A5D3D1U0 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00400 PE=3 SV=1) HSP 1 Score: 244 bits (622), Expect = 7.93e-81 Identity = 126/147 (85.71%), Postives = 134/147 (91.16%), Query Frame = 0
BLAST of MC05g0525.1 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein ) HSP 1 Score: 181.0 bits (458), Expect = 6.8e-46 Identity = 84/108 (77.78%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of MC05g0525.1 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 ) HSP 1 Score: 96.3 bits (238), Expect = 2.2e-20 Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of MC05g0525.1 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 ) HSP 1 Score: 83.2 bits (204), Expect = 1.9e-16 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of MC05g0525.1 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 ) HSP 1 Score: 80.9 bits (198), Expect = 9.5e-16 Identity = 46/134 (34.33%), Postives = 76/134 (56.72%), Query Frame = 0
BLAST of MC05g0525.1 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein ) HSP 1 Score: 79.7 bits (195), Expect = 2.1e-15 Identity = 46/126 (36.51%), Postives = 74/126 (58.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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