MC05g0294.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.GGTTGTTTCATAATCTTGATTATAATATTTACTAAACAAGATTGGTAAAAATGTTTCCTAATCTTTATTATAATATGATACATATAAAATGTTATTAAAGCGATTAATTGTATCCTAAATCCTAATAATCCCTCCCCCTACGAATTTAGGTTTTAGGCTCTCTCTCTCTCTCTTTCTCTCTCTTCTGTGTGTGTGATCATCTTCTAATTCTGCATTCTTCGTCATCTACTTGCTGCCTTTGCCATCATGATTCCTATTGTCATCATTGCTCCAAAAGCCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCCTCTTTTTGTTCCATTTCCTCTTCTATTTATACTCTTAATCCCTTCTCCGCCATTTTCAACCAATTCTCTCTCTCAGAGCTCTACAAATTGAAATTCTAGCCGGAAATGTGCGATTCCTCTCGATTGCTGTTCGTTTCGTCCACTCGTTCGTCTCTAGGTTGCCGACATCGTCACCGGCGGCATCCGCTTCGAGTTCACAGGCTTATTAGGTGATTGATTGATTGATTGATTTGTTCGTTTCTATTCTCCGCTCTGTTTCTGATTTGGTGATGTGCAGGAGGATGAGATTGGTGAAGGAAGAGGCGGAGGACGACGGCGTCGAGGTGGAGATGGAGATCAAGAATTTGAAACTGTTCATGGAGAATCAGAGCATTATCGAGGAGAACGAGCGGCTGAGAAAGAGAGCTTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAAATCCAGAGTTTCTCCAATCAAAAACCGCAACCTCCGATTTGAGCGCCTGGCCGGACAATTGAATCATCTGTAAGGATCACGACTAGATCAGGATCTCTCAAAACCTTCGATAACTTTCTTGCTATCAATTGGCAATTTCTTTTTTGATATTCCTCTGATTCCTTGGTTTGTAATCTGTTACCTTGACAATAAAATAGGGGTTTGGTTTAGAGGGGAGGGGAATAAGGGTGAGTTCGGTTATTAGGGCTTGGGATAGATTTTTAGAATAATATAGTCAAGTCATGTTATGAAATAGAAATATCATGAAAAGTGTTATTGTAATAGAACTCTGTTCTTGTTCTCCCATATTTGATTGATCCAAATTCTCCATTGAAGAAGAAGGAACCTTTCTTCTGTGTGATGAAACTCCATTGAAGAAGGTGGTTGGTTTTTGATGTTGAAGCAAAACTCAAAATGGTGAAATAAGATTCCGGCTGTAAAAGGGAATATAACTTTGTTCAAGAAAGCGTTGCTTTGTGGAAAGCCAAATTCTCTCTCACCATTTTAATTCTTTTACTATTCAAAAAAATTATTCTCCCTCTATAT GGTTGTTTCATAATCTTGATTATAATATTTACTAAACAAGATTGGTAAAAATGTTTCCTAATCTTTATTATAATATGATACATATAAAATGTTATTAAAGCGATTAATTGTATCCTAAATCCTAATAATCCCTCCCCCTACGAATTTAGGTTTTAGGCTCTCTCTCTCTCTCTTTCTCTCTCTTCTGTGTGTGTGATCATCTTCTAATTCTGCATTCTTCGTCATCTACTTGCTGCCTTTGCCATCATGATTCCTATTGTCATCATTGCTCCAAAAGCCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCCTCTTTTTGTTCCATTTCCTCTTCTATTTATACTCTTAATCCCTTCTCCGCCATTTTCAACCAATTCTCTCTCTCAGAGCTCTACAAATTGAAATTCTAGCCGGAAATGTGCGATTCCTCTCGATTGCTGTTCGTTTCGTCCACTCGTTCGTCTCTAGGTTGCCGACATCGTCACCGGCGGCATCCGCTTCGAGTTCACAGGCTTATTAGGAGGATGAGATTGGTGAAGGAAGAGGCGGAGGACGACGGCGTCGAGGTGGAGATGGAGATCAAGAATTTGAAACTGTTCATGGAGAATCAGAGCATTATCGAGGAGAACGAGCGGCTGAGAAAGAGAGCTTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAAATCCAGAGTTTCTCCAATCAAAAACCGCAACCTCCGATTTGAGCGCCTGGCCGGACAATTGAATCATCTGTAAGGATCACGACTAGATCAGGATCTCTCAAAACCTTCGATAACTTTCTTGCTATCAATTGGCAATTTCTTTTTTGATATTCCTCTGATTCCTTGGTTTGTAATCTGTTACCTTGACAATAAAATAGGGGTTTGGTTTAGAGGGGAGGGGAATAAGGGTGAGTTCGGTTATTAGGGCTTGGGATAGATTTTTAGAATAATATAGTCAAGTCATGTTATGAAATAGAAATATCATGAAAAGTGTTATTGTAATAGAACTCTGTTCTTGTTCTCCCATATTTGATTGATCCAAATTCTCCATTGAAGAAGAAGGAACCTTTCTTCTGTGTGATGAAACTCCATTGAAGAAGGTGGTTGGTTTTTGATGTTGAAGCAAAACTCAAAATGGTGAAATAAGATTCCGGCTGTAAAAGGGAATATAACTTTGTTCAAGAAAGCGTTGCTTTGTGGAAAGCCAAATTCTCTCTCACCATTTTAATTCTTTTACTATTCAAAAAAATTATTCTCCCTCTATAT ATGTGCGATTCCTCTCGATTGCTGTTCGTTTCGTCCACTCGTTCGTCTCTAGGTTGCCGACATCGTCACCGGCGGCATCCGCTTCGAGTTCACAGGCTTATTAGGAGGATGAGATTGGTGAAGGAAGAGGCGGAGGACGACGGCGTCGAGGTGGAGATGGAGATCAAGAATTTGAAACTGTTCATGGAGAATCAGAGCATTATCGAGGAGAACGAGCGGCTGAGAAAGAGAGCTTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAAATCCAGAGTTTCTCCAATCAAAAACCGCAACCTCCGATTTGA MCDSSRLLFVSSTRSSLGCRHRHRRHPLRVHRLIRRMRLVKEEAEDDGVEVEMEIKNLKLFMENQSIIEENERLRKRAFLLHKENQVLLSQIQSFSNQKPQPPI Homology
BLAST of MC05g0294.1 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of MC05g0294.1 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.6e-08 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0
BLAST of MC05g0294.1 vs. ExPASy Swiss-Prot
Match: Q9LXI8 (Protein LITTLE ZIPPER 3 OS=Arabidopsis thaliana OX=3702 GN=ZPR3 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 7.6e-04 Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of MC05g0294.1 vs. NCBI nr
Match: XP_022146904.1 (protein LITTLE ZIPPER 2-like [Momordica charantia]) HSP 1 Score: 196 bits (499), Expect = 4.55e-63 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of MC05g0294.1 vs. NCBI nr
Match: XP_022980450.1 (protein LITTLE ZIPPER 1-like [Cucurbita maxima]) HSP 1 Score: 133 bits (335), Expect = 5.02e-38 Identity = 77/102 (75.49%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of MC05g0294.1 vs. NCBI nr
Match: XP_022924351.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata] >KAG6582570.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018954.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 133 bits (335), Expect = 5.02e-38 Identity = 77/102 (75.49%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of MC05g0294.1 vs. NCBI nr
Match: XP_023527865.1 (protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 130 bits (328), Expect = 5.84e-37 Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 0
BLAST of MC05g0294.1 vs. NCBI nr
Match: XP_022974108.1 (protein LITTLE ZIPPER 3-like [Cucurbita maxima]) HSP 1 Score: 125 bits (314), Expect = 7.02e-35 Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of MC05g0294.1 vs. ExPASy TrEMBL
Match: A0A6J1CZF0 (protein LITTLE ZIPPER 2-like OS=Momordica charantia OX=3673 GN=LOC111015992 PE=4 SV=1) HSP 1 Score: 196 bits (499), Expect = 2.20e-63 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of MC05g0294.1 vs. ExPASy TrEMBL
Match: A0A6J1IWC5 (protein LITTLE ZIPPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479815 PE=4 SV=1) HSP 1 Score: 133 bits (335), Expect = 2.43e-38 Identity = 77/102 (75.49%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of MC05g0294.1 vs. ExPASy TrEMBL
Match: A0A6J1E9A8 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431869 PE=4 SV=1) HSP 1 Score: 133 bits (335), Expect = 2.43e-38 Identity = 77/102 (75.49%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of MC05g0294.1 vs. ExPASy TrEMBL
Match: A0A6J1IF90 (protein LITTLE ZIPPER 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472719 PE=4 SV=1) HSP 1 Score: 125 bits (314), Expect = 3.40e-35 Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of MC05g0294.1 vs. ExPASy TrEMBL
Match: A0A6J1F7Z1 (protein LITTLE ZIPPER 3-like OS=Cucurbita moschata OX=3662 GN=LOC111442972 PE=4 SV=1) HSP 1 Score: 120 bits (300), Expect = 4.60e-33 Identity = 70/101 (69.31%), Postives = 81/101 (80.20%), Query Frame = 0
BLAST of MC05g0294.1 vs. TAIR 10
Match: AT3G60890.1 (protein binding ) HSP 1 Score: 60.5 bits (145), Expect = 9.5e-10 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of MC05g0294.1 vs. TAIR 10
Match: AT2G45450.1 (protein binding ) HSP 1 Score: 58.2 bits (139), Expect = 4.7e-09 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0
BLAST of MC05g0294.1 vs. TAIR 10
Match: AT3G60890.2 (protein binding ) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of MC05g0294.1 vs. TAIR 10
Match: AT3G52770.1 (protein binding ) HSP 1 Score: 44.7 bits (104), Expect = 5.4e-05 Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following utr3 feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following utr5 feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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