MC04g0116.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0116.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	60S ribosomal protein L11
Location	MC04: 861696 .. 869664 (+)
Sequence length	2193
RNA-Seq Expression	MC04g0116.1
Synteny	MC04g0116.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTAGGCACAAACATAGAATTCCAACTTTGCATTTTTAACATATATATACACAAATATTACATATTCCAAGAGTTTCCACACAATAAAGTTATTTCTAAAAAATGATTTTAATTTACTAAAAAGAAATTTCAAACCATCAAATTATACCTTCAAAAGCTTCCAAAATATCCTTTTAAAAACATAAAAATTCTAAAAACAATCTCCAGCTCCATCTTGCTCCAAGTTTTGATCTTCTCCTTCAACTTTTTTTTTCAAAACGTGTGCTCCACAGTAAAAGTTGTTACAAAATCTGAAACCGTGTAGAAGTTCTAAAGCAATTTTATGGCATTTCAACATCAATCAATCAAGTAACTGATAAACATCCAAAGAAATTTGATTCAAAACAACTTTCATAAGAGTAAGAAAGCTTACGAGTCTTGGGGTCCTATAAGTTTGGATTGCTTAAGGTAGGAGCAAAAATTTTGCATTTTCTGTTTGTTCCCATTGCTTTTTCTTCTCTGGTTTTGTCTGTTTCATATTCAGTCCACTTTTTTGACAACATTATGTAGGACTTGTGATGGGGGTGTGCCTCATTGGATAATCGCCCTCTTTTCACAAATTCTTGGCTTCTCTGAACAACCAACAGAGGAGAAGCTTATTTGAGACAGTAAGTTTAAATTCCGTGCAGTTGTCAGTTTCCCTTGCTTCATACTAAAGAAAGATAACAAACAATCTTATATCTCTCGGATTCTCGCCCATTTATTCTGACAACTTTGTGTCATTCATTTCGTACTTGTTTCTTTAGAACCGAGCTGAAATTCATGGGATGCTGCTGAATTTTGCAACCTGGAGCAGACTGAAGCATTTGTAACAGCCTTGGGTTTCCTTCTTTAATTCCGGGAAGTTCATCCACCTGTCACCGTTTTGCTTCAGTAGTATGGTGTCTCGAAATTCTGGGATGCCTGCCTCTGAAATGTAAACTCGTTCTTCGAGACGAAACATCGATATGATCAAACAAGATGAAGGATCAAGCGGGACACCAAATCGAGATGAATCTGTGACAGTTCTTGCATTGCCACCGAGACCTCAAGAAGCAAAAGAAGTAACCGGAGGGGTGGTGCAGAACCACAATGAGAATGAGGCTGGCAAGAGGCATGGAGAGGAATCGAAAGAGAGCCACCATAACTGCATCATTGATATAAAAAGCAGTGGTGAGTCAGTGGATGGTGAAGATTCTAGTGAAGAAAAAGTTTGCAGGATATGCCATTTGAGTTCTGAACATCAGTCAATAGCTTCAGATCTCATACAACTCGGATGTCGCTGCAAAGATGAGCTCGGAATTTCCCACCGTGACTGTGCTGAGATTTGGTTTATGCATAGAGGCAACAGGTAAAATTTCTATGATCTATATCTTCTTCTCTCTTCACCATTCTCACAACAGTTTATGATGACTTCAACTCCAATCCAATTTCATCCCTTTCTCATGATAGACAGTGTGAAATCTGTGGTCAGACTGCAACAAACGTAAGGGGAATCAGGAGCGGCGGTTTCATGATACAGCGGAATGAAAGGAGGTTGGTAGCAAGCTCAACAGTCTCCACAGTGTCCTTGGACAGCGACGATTCACTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCTTATTAACATGCACAGTTCTAGCCTTCCTCCTCCCATGGTTCTTTCGTCTAGATTTCTTTGGATGATGAGTGATGACTTTTCTCGGACATCCCATCATCAAATAAACCAGAAATGAAGTGCCTGACCCATGCTACTGAGGACCTGGGAATAAGGAAAAACAACAGTTTCACACGGAGGAATTGACAGATATATATGTAGTTCTCGCATACTGTCTCTAAATAAATCAGCAGAAGAGAGATCAAAGCCAAACAAACTAGTTCTATAGAAAAGTATAAATGAGAAACGACATTCAGAACCATACAGGCCTGAATGACATGTAATATTCATTTTTCACTAGAAAATTTCACAAATGCAATCTTTACAGGTTGGTGGCTGACATGACATTCACGTTCCTCACAAACAATGCAAGCAAAATGAGAATAATTGGCTAGTACTCCTGAGAGAGAGATCACAATGCAAAATAAATAAATGGTTTTAATTCACTAAGCTAATTACTTTTTCCACATTAAAAATTTACTATTCTAAGGAACGTCTTAGTCGAGTTCTCGAACAAATAAGACGTGCACCAAGTGTAGAGACCACTAGGAAAACCTTGACAAAGTGGATCCAGCTTTCAAGCTTCTACCCATAGTTACCTTGCATCCTAATGAATATTTATATTACAATTCAATAAGTTAGTCAGTTTCAGAATAATTGAAATTTTTGTTGCACTCACGATGTTTTTCTAGAATATTGCTAAAGAGGAAAAAAGTAAGAAGTTAAAGACAAATAAAAGAATATACAATACTCCTGTCTGATTCACAAAATCGCATATATGATCTCAGAAATTAAATGAAGATGTTATGCTGAAGCCTGCAATAACTAAAGAATAAGATTGTAAATTATGAAAGGTATTGTTTAACATTTTTCTTTTATAGAATATAATAGCAAGCATAGTATTTCAAGTCGAGAAAATATACCAAACTCTAGAAATTTCCCCTATTCACGTCCTCCTTGATATAAATAGCATTGACAATGAGCAAACAATACTCGTGTCTGATTTAAAAAGAATGATGATAAATAAAAGCAAAAATGTAAATACATGTGCGTAAACAGAAAAGTTCTCAATCTGAATTTGTAAGAGGAGCTGGAGGCCATAAGATTATCCACAAACCACTCTCAAGAACATGCTGAAATTTTTGCAGTATGATGTGATAAAATAAACCTGCTGACACAAAAGCAAAATTCAACCACTTGTCCACAGGTGGGATCCTTGACTTTCCAAAATAACATACAAATAAAAGAAGTAGAATCACATATGACATTGCTTTACCTGGATGTCCAACCAAAGCAACTAAGGACTTGTAGTCAGCTTTGAACAAGGTCAACAGGACCGACATGCCCTTCCAGAAACTGCATCAGTTTAATTGTTTGATAAAGGCAGAGTCCACCAATCAAACACATCCCATATAATTTTCAAATACATAACTCAGTTTCCATGATACCATTTTCGGTGATAGCCAATCAATGTCCTGAGATCTTCAAAACATTCGTAGTGTTAAAGTTAAATATCTTAACAGTGAAGCATGCAGCTGAAGGGCGAACTAATGGCACTTGATGCTTGCATTACCCTTGAACCAAATCATTTGGTTTCCAAAGTTAAAGCCATTTTTGGATCTGGTATAGCATTCAAATTCAGGCAGTCAATGAAAGAGCCGAGCCAGATGTAACTTTGATTTAAGCTTCCTCGCTTCACTTGTAAATCCTGAAGAACAAAGACCATCAATAACTGCTCGTTGTGTGGACTTAAGAACTTTCATGCCACCTCTTATACACGAAAGCAATAACTTTGATGCACAACGGAATCTCCTCGCCTTGCAAAGATTGTGCACCAAAGAGGTGTAGGTAAAAGAATCCCTTGTTTCCATTGATTCAAACAATTTCATTGCATGGTCAATTTGTCCAGCCTTACACAACCGGTCAATTAGACAATTTAAGGGTACCAAGTTTGAAGCTAAGCCTGTTGTATACATGTAATTCAAATGTCGCCGGGCCCCATCAATATTGCCAGCCCGGCACAGCCCATCAGTTATTATAGTATGTGTGTAGTTGTCAAATTCTAGTCCCCGTGACTCAATCTCATCCAACAACTTATATGCTGCATCCAACTTACCCTCTTTACAGTACAAATGAATAAATGTGTTATAAAAAACTAAATCAATCCCCATGCGATTCCTTATCATTTGTTCCATGCAAACATTTGCCTCTTCGAACCTACCCAACTTTAAAAAAGCACCAATAACCGTGCAGTAAGCAAAGCCATCAAAAGCATATCCTTTGTTCTTCATCTCAAAGAAAATCTCAAATCCATGTTTATATTGCCTAGATCTAAGGCAGCTTTTCATTAATGTAGTGTATGTTATAGCATCAGGCTCAAGACCCGAATCCCTGGCCTCATTGAGCATCCTTCTAGCAGCCTTCAACCTACCCACCTTGCAAAGACCATTAATAAGAATATTATATGTAACTAATTGAGGAACAAATCCATGGCGTTGTAAATTTCTGAACAACATTATGGCATTGCTTGTATATCCATATTTACAAAGGCCATTAATCATTGTATTAAACGTAACCGGATGAGGAGAGAGGTCTTTAAGTATAATATCCTTGAAAACTCTATTGGCTTCGTCCGGCTTTCCTAATCTGAAGAAACAATGCATCAAAGTGTTGTAACTCCATATATCAGGAGTGATACCTGATTGAAGCATTTCTTCGAACAGATCAAGGGACTGTTCCAATGAGCAATTCCTGGTTGCCCCAGCTATCAAAGAATTGTAAGTAATGACATCTGGGCTTATACCAGCTTCTCTCATTCTATAAATAACAGAATAAGCCGCATCCATGCCGATAAACCGACAATATCCATCAAGCAACGTATTGTAAGTCACTACATCCGGGAGAACTCCTAAACGTATACCATCTATTATGACAGCTTCAGCTTTCTGCATTTGCCGAGATTTACAATATGAGGCGACACAAATATTCAAAAACTTTGTGGAGAATTTACAGACCATTCTTCAAACTGCCCTTGGGATTTTAAAAAACCTGCCAATCCAGTAAGTCAACAAGAGAATAATCATTTTGCACATAAAAATATGAAAACGCTTAAATAAGACCATTGAAGCAAAGAAACAGTTATATCGAAGCGATAATGTGAAAGGCAATCCTAACCGGAAAAACAACCAGAAACTTCAATAACTCATGATAATCATGGTGAGACCTCAAAAGACATGGAAGTTCAGGAAGACGAAATCCAGCTTGACTCTAATCCGGAAAAATGAGCATTTTCACCAAATTAAATCAAACGATCGGTGCCTTAATTAAATTAAATGAAAACACAATCCACTTCCGCGAAATTATTACTGGGATTAGCAAATAACAGCAATAATACAAGAGAAAACTTACTCGTCGGGATTTACCAGTACGAAACGCAAGAAATTTCACTGTTCTTACGAATGCAATAAGTAATTGCCACCAAACCTTTGGAGAAATGTAGAAAAACAAGAGTATTCGGTGAAATATGTCACCTCTCGCAGCTTCTGCTCGTCGCTCAGATCATAAATGGAGTCGCAGATGGGCGTTTCCTACTTTCCTCCCACTTCTAGCGGATGGCTGATGACATTGGCAATGTACAAATTTCCATTCGCGAAGTAGCCAACAAGACTTGAATTGGATGGCGTCAGTGGAGAAATGGAATTCGGGAATCGAAGGCGATTTTGAAACAATTATTTAAAAGTTGATTGTTCTGGTCGTGCAGATTAAGTTAGAAATAAAAATCGAAGTATTATTTGTCCAAAAAACAATTAAAAAAAAAGAGAGAGAGAGAAAAGAGAACTCTTCTTTTTAAGATTTTCTAAGAAAATGGTCTGTGATATATATATTTTCTTAGATTAGCTCAAAAGTAATGGTATAATTGAGTTCAAATTTTTCCATCTCTAAATAAATATTTTTTTATTATTTTTTTAAATCTTGGACAAGTATTATCCACGGACATACGAATATTTTAAAAAGAAAAATGATAGTAAAAATGCAAGGTTTATTATCTTGACAGGTTACCTTTCAAAACAATTTGGGCATCATTATTTTTTAATAAACTTTTTTTCTTTGAACTTTGTTTTTGAATAAGTTTGGTCTTGATATTTTTTATTTAAAATTTATAACTAGTAATACTAGAAAAATTATACATTTTTGCCACCCGTTAAAAATTATAATTTCACAATTTTGACGATGTGGGCTATTTACGAAATTTCACAAATTTAATAGCAATCTTGTAGGCCCACAATTTAAGCCCATAACCTCCGAACTTGAAATCCTAGCTTCTTCTACTTTGGAGGCCCACAATTTAAGCCCATAACCTCCGAATTTGAAACCCTAGCTTCTTCTACTTCAACCCATATTAGGGTTTCTTCGCCCCTCCCTCGGATTGAGAAGCAGTAGCAGGAACAGCGCAACAGCCGCAGCCGCCCGCTAGGATTCCCCAATGGTGGTTTCTCCGATTCGTGTTTTTCTCTCCCATTAGATTGTTAAAACTTCTATAATTGTGTTTTATTCCTGCTCCCTAATCCTCTGCATCTGTTAATATGGCGCAGGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTAGTACAAACTTCACCGAGTTCTGTGCATTTTGTCTGCTGATTTGGTTGCTTCTAGTTTTTGTTTCCGCGATTTATAGTTCACTTTTCTTAGGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGGTACAACTTTTTTTTCCTCATCTCGTACCCGCTTGATTAAGACTACAAAATGGTTCGGATGAAAACGAGTAAATATATATTTGAAGAGAAATCTAGAGTCGCACCTTAGGGCTGATTAATCGTGGGATTTAGGTTTATGAGATGCAAAACTACTTATTTCGAGTTTATGATTTTATGATTCAGAACTGGAAATAAAGTTATCTTTGAAAGTCATATCACAATATTGGATCTGATAGAATAATTTGTTGGTGGGTTTTTTCTCTCTTGTGAACAATAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTAAGTTTAAGCCCAAACCCATCTGAATCTCCCTTCAATTATGTTCAAATTTTTTGTCTGAAACTTACTGCCATGTGATCAATTTCCTCAGAGATCTGTAGTCTAATTTGCTTAGGTGATTCTGTTTTGATTTGTATGCCAAAATAGTTATATTCAAATGCAACATTCATTGGGTTGAGGTATTTGTCAATGTTAAATATTTGATTAAGTATGACAACTTTTGCTGCCCAAAGGAGATGGTGATCGAAATTCCCGGTAGTTTTGGAAACAGGGAACAGGATCCCTAATCCCTGTCCTAACTGATGTGCTTGTCGGGATTGAAATGATCTGGAAGGACGGGAATAGGGGAGGGAGGGACATTCCTGACCCTTCATGAGTGATGACATCTCTATCTATGAAGTTTACCTTTAAACAATCTTGTTTGTTTATGTGCTATTGTATGACATTTCAGGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACTGGTTAAGCCCTAGAGGGATTTCCCAAATAGTTTGAGAGCTATTTGTGTGCAAGTTATAAAATTTTGTGCTTTTGAAATTAGCCTGACTGAAGCTCCTTGTTTTCTTTTCTTGAATATTTTTGGGGTTTAATGGAGATTATTAGTTTCAATTTGGACAACTTTTTTTAAGCCGTCGGTAGTCATGTTTTAGTAATTATATCCTTCAATACTCTGAGATATCAATCTTCTTCGTTCTTATTCCTTAAAGCATCAGCTTCAAGCACCGTTTGTCTGTGACATTCTTATTGCTGATATTATTAATTGTGTTTCATTCTAGACGTAAATGGAAGATCGAAC

mRNA sequence

GGTTAGGCACAAACATAGAATTCCAACTTTGCATTTTTAACATATATATACACAAATATTACATATTCCAAGAGTTTCCACACAATAAAGTTATTTCTAAAAAATGATTTTAATTTACTAAAAAGAAATTTCAAACCATCAAATTATACCTTCAAAAGCTTCCAAAATATCCTTTTAAAAACATAAAAATTCTAAAAACAATCTCCAGCTCCATCTTGCTCCAAGTTTTGATCTTCTCCTTCAACTTTTTTTTTCAAAACGTGTGCTCCACAGTAAAAGTTGTTACAAAATCTGAAACCGTGTAGAAGTTCTAAAGCAATTTTATGGCATTTCAACATCAATCAATCAAGTAACTGATAAACATCCAAAGAAATTTGATTCAAAACAACTTTCATAAGAGTAAGAAAGCTTACGAGTCTTGGGGTCCTATAAGTTTGGATTGCTTAAGGACTTGTGATGGGGGTGTGCCTCATTGGATAATCGCCCTCTTTTCACAAATTCTTGGCTTCTCTGAACAACCAACAGAGGAGAAGCTTATTTGAGACAAACCGAGCTGAAATTCATGGGATGCTGCTGAATTTTGCAACCTGGAGCAGACTGAAGCATTTGTAACAGCCTTGGGTTTCCTTCTTTAATTCCGGGAAGTTCATCCACCTGTCACCGTTTTGCTTCAGTAGTATGGTGTCTCGAAATTCTGGGATGCCTGCCTCTGAAATGTAAACTCGTTCTTCGAGACGAAACATCGATATGATCAAACAAGATGAAGGATCAAGCGGGACACCAAATCGAGATGAATCTGTGACAGTTCTTGCATTGCCACCGAGACCTCAAGAAGCAAAAGAAGTAACCGGAGGGGTGGTGCAGAACCACAATGAGAATGAGGCTGGCAAGAGGCATGGAGAGGAATCGAAAGAGAGCCACCATAACTGCATCATTGATATAAAAAGCAGTGGTGAGTCAGTGGATGGTGAAGATTCTAGTGAAGAAAAAGTTTGCAGGATATGCCATTTGAGTTCTGAACATCAGTCAATAGCTTCAGATCTCATACAACTCGGATGTCGCTGCAAAGATGAGCTCGGAATTTCCCACCGTGACTGTGCTGAGATTTGGTTTATGCATAGAGGCAACAGACAGTGTGAAATCTGTGGTCAGACTGCAACAAACGTAAGGGGAATCAGGAGCGGCGGTTTCATGATACAGCGGAATGAAAGGAGGTTGGTAGCAAGCTCAACAGTCTCCACAGTGTCCTTGGACAGCGACGATTCACTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCTTATTAACATGCACAGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACTGGTTAAGCCCTAGAGGGATTTCCCAAATAGTTTGAGAGCTATTTGTGTGCAAGTTATAAAATTTTGTGCTTTTGAAATTAGCCTGACTGAAGCTCCTTGTTTTCTTTTCTTGAATATTTTTGGGGTTTAATGGAGATTATTAGTTTCAATTTGGACAACTTTTTTTAAGCCGTCGGTAGTCATGTTTTAGTAATTATATCCTTCAATACTCTGAGATATCAATCTTCTTCGTTCTTATTCCTTAAAGCATCAGCTTCAAGCACCGTTTGTCTGTGACATTCTTATTGCTGATATTATTAATTGTGTTTCATTCTAGACGTAAATGGAAGATCGAAC

Coding sequence (CDS)

ATGATCAAACAAGATGAAGGATCAAGCGGGACACCAAATCGAGATGAATCTGTGACAGTTCTTGCATTGCCACCGAGACCTCAAGAAGCAAAAGAAGTAACCGGAGGGGTGGTGCAGAACCACAATGAGAATGAGGCTGGCAAGAGGCATGGAGAGGAATCGAAAGAGAGCCACCATAACTGCATCATTGATATAAAAAGCAGTGGTGAGTCAGTGGATGGTGAAGATTCTAGTGAAGAAAAAGTTTGCAGGATATGCCATTTGAGTTCTGAACATCAGTCAATAGCTTCAGATCTCATACAACTCGGATGTCGCTGCAAAGATGAGCTCGGAATTTCCCACCGTGACTGTGCTGAGATTTGGTTTATGCATAGAGGCAACAGACAGTGTGAAATCTGTGGTCAGACTGCAACAAACGTAAGGGGAATCAGGAGCGGCGGTTTCATGATACAGCGGAATGAAAGGAGGTTGGTAGCAAGCTCAACAGTCTCCACAGTGTCCTTGGACAGCGACGATTCACTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTCTTATTAACATGCACAGCTTCGGAGAAGAAGTTATCGAACCCCATGAGGGACATTAAGGTGCAGAAGCTCGTCCTCAATATCTCAGTCGGCGAGAGCGGAGATCGGCTTACAAGAGCCGCAAAGGTGCTCGAGCAACTCAGTGGACAGAGCCCCGTGTTCTCCAAAGCGAGATACACTGTACGATCTTTTGGAATCAGGCGTAATGAGAAGATTGCTTGCTATGTCACCGTTAGAGGTGAGAAGGCGATGCAGCTTTTGGAAAGTGGGCTGAAGGTTAAGGAGTACGAGTTGTTGCGAAGGAACTTCAGTGACACTGGATGCTTTGGCTTTGGTATTCAGGAGCACATTGATCTTGGAATCAAGTATGATCCCTCCACCGGTATCTATGGTATGGACTTCTTTGTTGTTTTGGAGCGACCGGGGTACCGTGTTGGCCGCCGTAGGAGGTGCAAGTCTCGCGTTGGGATCCAGCACAGAGTCACAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAGGGTGTGATTCTTAACAAGTCGCAGGCAATCACTGGTTAA

Protein sequence

MIKQDEGSSGTPNRDESVTVLALPPRPQEAKEVTGGVVQNHNENEAGKRHGEESKESHHNCIIDIKSSGESVDGEDSSEEKVCRICHLSSEHQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAITG

Homology

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BLAST of MC04g0116.1 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 354.4 bits (908), Expect = 1.6e-96
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 370
           TGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ IT
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIT 181

Query: 371 G 372
           G
Sbjct: 182 G 182

[Close]

BLAST of MC04g0116.1 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 354.4 bits (908), Expect = 1.6e-96
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 370
           TGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ IT
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIT 181

Query: 371 G 372
           G
Sbjct: 182 G 182

[Close]

BLAST of MC04g0116.1 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.1e-96
Identity = 174/179 (97.21%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAI 370
           TGIYGMDFFVVLERPGYRVGRRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQAI
Sbjct: 122 TGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180

[Close]

BLAST of MC04g0116.1 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 345.5 bits (885), Expect = 7.4e-94
Identity = 171/180 (95.00%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFGI
Sbjct: 2   ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 370
           TGIYGMDF+VVLER GYRV RRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK+QA T
Sbjct: 122 TGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQANT 181

[Close]

BLAST of MC04g0116.1 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 7.4e-94
Identity = 171/180 (95.00%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFGI
Sbjct: 2   ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 370
           TGIYGMDF+VVLER GYRV RRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNK+QA T
Sbjct: 122 TGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQANT 181

[Close]

BLAST of MC04g0116.1 vs. NCBI nr
Match: OMO65429.1 (Ribosomal protein L5 [Corchorus olitorius])

HSP 1 Score: 471 bits (1213), Expect = 5.27e-161
Identity = 247/327 (75.54%), Postives = 265/327 (81.04%), Query Frame = 0


Query: 61  CIIDIKSSG-------ESVDGEDSSEEKVCRICHLSSEHQSIAS-----------DLIQL 120
           C+IDIK SG       E  DG     EKVCRICHL++E QS+ S           DLI+L
Sbjct: 201 CVIDIKGSGGGGKQFKEGWDG-----EKVCRICHLNTE-QSLESTESTSNSEATMDLIEL 260

Query: 121 GCRCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASST 180
           GC CKDELGI+H  CAE WF  +GNR CEICGQTA NV G+R   F+   +++      +
Sbjct: 261 GCACKDELGIAHSHCAEAWFKLKGNRMCEICGQTAKNVTGVRDNRFIEDWHDQ-----GS 320

Query: 181 VSTVSLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLT 240
            S V + SD ++ C  GQ FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLT
Sbjct: 321 TSIVGISSDRAVGCWRGQPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLT 380

Query: 241 RAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 300
           RAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL
Sbjct: 381 RAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 440

Query: 301 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQ 360
           LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLER GYRVGRRRRCKSRVGIQ
Sbjct: 441 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQ 500

Query: 361 HRVTKEDAMKWFQVKYEGVILNKSQAI 369
           HRVTKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 501 HRVTKEDAMKWFQVKYEGVILNKSQNI 516

[Close]

BLAST of MC04g0116.1 vs. NCBI nr
Match: OMO76145.1 (Ribosomal protein L5 [Corchorus capsularis])

HSP 1 Score: 470 bits (1210), Expect = 1.15e-160
Identity = 246/327 (75.23%), Postives = 265/327 (81.04%), Query Frame = 0


Query: 61  CIIDIKSSG-------ESVDGEDSSEEKVCRICHLSSEHQSIAS-----------DLIQL 120
           C+IDIK SG       E  DG     EKVCRICHL++E QS+ S           DLI+L
Sbjct: 193 CVIDIKGSGGGGRQFKEGWDG-----EKVCRICHLNTE-QSLESTDSTSNNEATMDLIEL 252

Query: 121 GCRCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASST 180
           GC CKDELGI+H  CAE WF  +GNR CEICGQTA NV G+R   F+   +++      +
Sbjct: 253 GCACKDELGIAHSHCAEAWFKLKGNRMCEICGQTAKNVTGVRDNRFIEDWHDQ-----GS 312

Query: 181 VSTVSLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLT 240
            S V + SD ++ C  GQ FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLT
Sbjct: 313 TSIVGISSDRAVGCWRGQPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLT 372

Query: 241 RAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 300
           RAAKVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL
Sbjct: 373 RAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 432

Query: 301 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQ 360
           LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLER GYRVGRRRRCKSRVGIQ
Sbjct: 433 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQ 492

Query: 361 HRVTKEDAMKWFQVKYEGVILNKSQAI 369
           HRVTKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 493 HRVTKEDAMKWFQVKYEGVILNKSQNI 508

[Close]

BLAST of MC04g0116.1 vs. NCBI nr
Match: RXH99070.1 (hypothetical protein DVH24_011395 [Malus domestica])

HSP 1 Score: 464 bits (1195), Expect = 5.08e-159
Identity = 237/322 (73.60%), Postives = 261/322 (81.06%), Query Frame = 0


Query: 61  CIIDIKSSGESVDGEDSSEEKVCRICHLSSE----------HQSIASDLIQLGCRCKDEL 120
           C+ID+KS      G+    E+VCRICHL S+          + SI +DLI LGC CKDEL
Sbjct: 152 CVIDMKSGSGRGFGDRWDGERVCRICHLGSDISPERKMETANSSITADLINLGCGCKDEL 211

Query: 121 GISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDS 180
           G++H  CAE WF  RGNR CEICG+TA N+ G    GFM   +E      +T++ +  +S
Sbjct: 212 GVAHGHCAEAWFRLRGNRTCEICGETAQNITGHGDNGFMEDWHE------ATLADIGNNS 271

Query: 181 DDSLSCCWG-QRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLE 240
            +    CW  Q FCNFL+ C ASE KL+NPMR+IKVQKLVLNISVGESGDRLTRAAKVLE
Sbjct: 272 SERNVSCWRRQPFCNFLMACLASENKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLE 331

Query: 241 QLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSD 300
           QLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSD
Sbjct: 332 QLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSD 391

Query: 301 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKED 360
           TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCK+RVGIQHRVTKED
Sbjct: 392 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKED 451

Query: 361 AMKWFQVKYEGVILNKSQAITG 371
           AMKWFQVKYEGVILNKSQ ITG
Sbjct: 452 AMKWFQVKYEGVILNKSQNITG 467

[Close]

BLAST of MC04g0116.1 vs. NCBI nr
Match: KAF5752812.1 (60S ribosomal protein L11 [Tripterygium wilfordii])

HSP 1 Score: 456 bits (1174), Expect = 5.55e-156
Identity = 238/328 (72.56%), Postives = 257/328 (78.35%), Query Frame = 0


Query: 61  CIIDIKSSGESVDG---EDSSEEKVCRICHLSSEHQ---------------SIASDLIQL 120
           C ID+K       G   E    EKVCRICHLS+E                 S + DLIQL
Sbjct: 135 CAIDVKHGDGGGGGGIKEKCDGEKVCRICHLSTEGSLENTVATMTTNAHMTSTSMDLIQL 194

Query: 121 GCRCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASST 180
           GC CKDELGI+H  CAE WF  +GNR CEICGQTA N+ G+    FM + NE+R   +  
Sbjct: 195 GCGCKDELGIAHVHCAEAWFKLKGNRLCEICGQTAKNITGVGDNRFMEEWNEQRYARNYN 254

Query: 181 VSTVSLDSDDSLSCCW-GQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRL 240
            S+   +       CW G  FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRL
Sbjct: 255 SSSERREG------CWRGPPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRL 314

Query: 241 TRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYE 300
           TRAAKVLEQLSGQ+PV+SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYE
Sbjct: 315 TRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYE 374

Query: 301 LLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGI 360
           LLR+NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRVGRRRRCKSRVGI
Sbjct: 375 LLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGI 434

Query: 361 QHRVTKEDAMKWFQVKYEGVILNKSQAI 369
           QHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 435 QHRVTKDDAMKWFQVKYEGVILNKSQNI 456

[Close]

BLAST of MC04g0116.1 vs. NCBI nr
Match: RXH86308.1 (hypothetical protein DVH24_017361 [Malus domestica])

HSP 1 Score: 450 bits (1157), Expect = 5.75e-153
Identity = 229/314 (72.93%), Postives = 257/314 (81.85%), Query Frame = 0


Query: 80  EKVCRICHLSSE----------HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNRQ 139
           E+VCRICHL+S+          + SI +DLIQLGC CKDELG++H  CAE WF  +GNR 
Sbjct: 180 ERVCRICHLNSDISPPRKMGTANSSITADLIQLGCGCKDELGVAHGHCAEAWFRVKGNRT 239

Query: 140 CEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDSDDSLSCCW-GQRFCNFLLT 199
           CEICG+TA N+ G  +  FM + +E      +T++ +  +S +  + CW GQ FCNF++ 
Sbjct: 240 CEICGETAQNITGHGNNRFMEEWHE------ATLADIGNNSSERNASCWRGQPFCNFIMA 299

Query: 200 CT-----------ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPV 259
           C            ASE K++NPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PV
Sbjct: 300 CLVIAFVLPWFFRASESKMANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPV 359

Query: 260 FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 319
           FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI
Sbjct: 360 FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 419

Query: 320 QEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVK 371
           QEHIDLGIKYDPSTGIYGMDF+VVLERPGYRVGRRRRCKSRVGIQHRVTKED+MKWFQVK
Sbjct: 420 QEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDSMKWFQVK 479

[Close]

BLAST of MC04g0116.1 vs. ExPASy TrEMBL
Match: A0A1R3H527 (Ribosomal protein L5 OS=Corchorus olitorius OX=93759 GN=COLO4_31259 PE=3 SV=1)

HSP 1 Score: 471 bits (1213), Expect = 2.55e-161
Identity = 247/327 (75.54%), Postives = 265/327 (81.04%), Query Frame = 0


Query: 61  CIIDIKSSG-------ESVDGEDSSEEKVCRICHLSSEHQSIAS-----------DLIQL 120
           C+IDIK SG       E  DG     EKVCRICHL++E QS+ S           DLI+L
Sbjct: 201 CVIDIKGSGGGGKQFKEGWDG-----EKVCRICHLNTE-QSLESTESTSNSEATMDLIEL 260

Query: 121 GCRCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASST 180
           GC CKDELGI+H  CAE WF  +GNR CEICGQTA NV G+R   F+   +++      +
Sbjct: 261 GCACKDELGIAHSHCAEAWFKLKGNRMCEICGQTAKNVTGVRDNRFIEDWHDQ-----GS 320

Query: 181 VSTVSLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLT 240
            S V + SD ++ C  GQ FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLT
Sbjct: 321 TSIVGISSDRAVGCWRGQPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLT 380

Query: 241 RAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 300
           RAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL
Sbjct: 381 RAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 440

Query: 301 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQ 360
           LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLER GYRVGRRRRCKSRVGIQ
Sbjct: 441 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQ 500

Query: 361 HRVTKEDAMKWFQVKYEGVILNKSQAI 369
           HRVTKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 501 HRVTKEDAMKWFQVKYEGVILNKSQNI 516

[Close]

BLAST of MC04g0116.1 vs. ExPASy TrEMBL
Match: A0A1R3I0M6 (Ribosomal protein L5 OS=Corchorus capsularis OX=210143 GN=CCACVL1_15847 PE=3 SV=1)

HSP 1 Score: 470 bits (1210), Expect = 5.57e-161
Identity = 246/327 (75.23%), Postives = 265/327 (81.04%), Query Frame = 0


Query: 61  CIIDIKSSG-------ESVDGEDSSEEKVCRICHLSSEHQSIAS-----------DLIQL 120
           C+IDIK SG       E  DG     EKVCRICHL++E QS+ S           DLI+L
Sbjct: 193 CVIDIKGSGGGGRQFKEGWDG-----EKVCRICHLNTE-QSLESTDSTSNNEATMDLIEL 252

Query: 121 GCRCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASST 180
           GC CKDELGI+H  CAE WF  +GNR CEICGQTA NV G+R   F+   +++      +
Sbjct: 253 GCACKDELGIAHSHCAEAWFKLKGNRMCEICGQTAKNVTGVRDNRFIEDWHDQ-----GS 312

Query: 181 VSTVSLDSDDSLSCCWGQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLT 240
            S V + SD ++ C  GQ FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRLT
Sbjct: 313 TSIVGISSDRAVGCWRGQPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRLT 372

Query: 241 RAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 300
           RAAKVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL
Sbjct: 373 RAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYEL 432

Query: 301 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQ 360
           LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLER GYRVGRRRRCKSRVGIQ
Sbjct: 433 LRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERAGYRVGRRRRCKSRVGIQ 492

Query: 361 HRVTKEDAMKWFQVKYEGVILNKSQAI 369
           HRVTKEDAMKWFQVKYEGVILNKSQ I
Sbjct: 493 HRVTKEDAMKWFQVKYEGVILNKSQNI 508

[Close]

BLAST of MC04g0116.1 vs. ExPASy TrEMBL
Match: A0A498JUC1 (RING-CH-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_011395 PE=3 SV=1)

HSP 1 Score: 464 bits (1195), Expect = 2.46e-159
Identity = 237/322 (73.60%), Postives = 261/322 (81.06%), Query Frame = 0


Query: 61  CIIDIKSSGESVDGEDSSEEKVCRICHLSSE----------HQSIASDLIQLGCRCKDEL 120
           C+ID+KS      G+    E+VCRICHL S+          + SI +DLI LGC CKDEL
Sbjct: 152 CVIDMKSGSGRGFGDRWDGERVCRICHLGSDISPERKMETANSSITADLINLGCGCKDEL 211

Query: 121 GISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDS 180
           G++H  CAE WF  RGNR CEICG+TA N+ G    GFM   +E      +T++ +  +S
Sbjct: 212 GVAHGHCAEAWFRLRGNRTCEICGETAQNITGHGDNGFMEDWHE------ATLADIGNNS 271

Query: 181 DDSLSCCWG-QRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLE 240
            +    CW  Q FCNFL+ C ASE KL+NPMR+IKVQKLVLNISVGESGDRLTRAAKVLE
Sbjct: 272 SERNVSCWRRQPFCNFLMACLASENKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLE 331

Query: 241 QLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSD 300
           QLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSD
Sbjct: 332 QLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSD 391

Query: 301 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKED 360
           TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCK+RVGIQHRVTKED
Sbjct: 392 TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKED 451

Query: 361 AMKWFQVKYEGVILNKSQAITG 371
           AMKWFQVKYEGVILNKSQ ITG
Sbjct: 452 AMKWFQVKYEGVILNKSQNITG 467

[Close]

BLAST of MC04g0116.1 vs. ExPASy TrEMBL
Match: A0A7J7E2C7 (60S ribosomal protein L11 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW01G00730 PE=3 SV=1)

HSP 1 Score: 456 bits (1174), Expect = 2.69e-156
Identity = 238/328 (72.56%), Postives = 257/328 (78.35%), Query Frame = 0


Query: 61  CIIDIKSSGESVDG---EDSSEEKVCRICHLSSEHQ---------------SIASDLIQL 120
           C ID+K       G   E    EKVCRICHLS+E                 S + DLIQL
Sbjct: 135 CAIDVKHGDGGGGGGIKEKCDGEKVCRICHLSTEGSLENTVATMTTNAHMTSTSMDLIQL 194

Query: 121 GCRCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGIRSGGFMIQRNERRLVASST 180
           GC CKDELGI+H  CAE WF  +GNR CEICGQTA N+ G+    FM + NE+R   +  
Sbjct: 195 GCGCKDELGIAHVHCAEAWFKLKGNRLCEICGQTAKNITGVGDNRFMEEWNEQRYARNYN 254

Query: 181 VSTVSLDSDDSLSCCW-GQRFCNFLLTCTASEKKLSNPMRDIKVQKLVLNISVGESGDRL 240
            S+   +       CW G  FCNFL+ C ASEKKLSNPMR+IKVQKLVLNISVGESGDRL
Sbjct: 255 SSSERREG------CWRGPPFCNFLMACLASEKKLSNPMREIKVQKLVLNISVGESGDRL 314

Query: 241 TRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYE 300
           TRAAKVLEQLSGQ+PV+SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYE
Sbjct: 315 TRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYE 374

Query: 301 LLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGI 360
           LLR+NFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLERPGYRVGRRRRCKSRVGI
Sbjct: 375 LLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGI 434

Query: 361 QHRVTKEDAMKWFQVKYEGVILNKSQAI 369
           QHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 435 QHRVTKDDAMKWFQVKYEGVILNKSQNI 456

[Close]

BLAST of MC04g0116.1 vs. ExPASy TrEMBL
Match: A0A498IS72 (RING-CH-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_017361 PE=3 SV=1)

HSP 1 Score: 450 bits (1157), Expect = 2.78e-153
Identity = 229/314 (72.93%), Postives = 257/314 (81.85%), Query Frame = 0


Query: 80  EKVCRICHLSSE----------HQSIASDLIQLGCRCKDELGISHRDCAEIWFMHRGNRQ 139
           E+VCRICHL+S+          + SI +DLIQLGC CKDELG++H  CAE WF  +GNR 
Sbjct: 180 ERVCRICHLNSDISPPRKMGTANSSITADLIQLGCGCKDELGVAHGHCAEAWFRVKGNRT 239

Query: 140 CEICGQTATNVRGIRSGGFMIQRNERRLVASSTVSTVSLDSDDSLSCCW-GQRFCNFLLT 199
           CEICG+TA N+ G  +  FM + +E      +T++ +  +S +  + CW GQ FCNF++ 
Sbjct: 240 CEICGETAQNITGHGNNRFMEEWHE------ATLADIGNNSSERNASCWRGQPFCNFIMA 299

Query: 200 CT-----------ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPV 259
           C            ASE K++NPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQ+PV
Sbjct: 300 CLVIAFVLPWFFRASESKMANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPV 359

Query: 260 FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 319
           FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI
Sbjct: 360 FSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 419

Query: 320 QEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVK 371
           QEHIDLGIKYDPSTGIYGMDF+VVLERPGYRVGRRRRCKSRVGIQHRVTKED+MKWFQVK
Sbjct: 420 QEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDSMKWFQVK 479

[Close]

BLAST of MC04g0116.1 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-97
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 370
           TGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ IT
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIT 181

Query: 371 G 372
           G
Sbjct: 182 G 182

[Close]

BLAST of MC04g0116.1 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-97
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 370
           TGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ IT
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIT 181

Query: 371 G 372
           G
Sbjct: 182 G 182

[Close]

BLAST of MC04g0116.1 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-97
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 370
           TGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ IT
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIT 181

Query: 371 G 372
           G
Sbjct: 182 G 182

[Close]

BLAST of MC04g0116.1 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-97
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 191 ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGI 250
           ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 251 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 310
           RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 311 TGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIT 370
           TGIYGMDF+VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ IT
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIT 181

Query: 371 G 372
           G
Sbjct: 182 G 182

[Close]

BLAST of MC04g0116.1 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 336.7 bits (862), Expect = 2.4e-92
Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 200 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 259
           MRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACY
Sbjct: 1   MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 60

Query: 260 VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFF 319
           VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+
Sbjct: 61  VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 120

Query: 320 VVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAITG 372
           VVLERPGYRV RRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNKSQ ITG
Sbjct: 121 VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG 172

The following BLAST results are available for this feature:

BLAST of MC04g0116.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42795	1.6e-96	96.13	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]
P42794	1.6e-96	96.13	60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2	[more]
P46287	2.1e-96	97.21	60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1	[more]
A2YDY2	7.4e-94	95.00	60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S...	[more]
Q0DK10	7.4e-94	95.00	60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2...	[more]

BLAST of MC04g0116.1 vs. NCBI nr


Match Name	E-value	Identity	Description
OMO65429.1	5.27e-161	75.54	Ribosomal protein L5 [Corchorus olitorius]	[more]
OMO76145.1	1.15e-160	75.23	Ribosomal protein L5 [Corchorus capsularis]	[more]
RXH99070.1	5.08e-159	73.60	hypothetical protein DVH24_011395 [Malus domestica]	[more]
KAF5752812.1	5.55e-156	72.56	60S ribosomal protein L11 [Tripterygium wilfordii]	[more]
RXH86308.1	5.75e-153	72.93	hypothetical protein DVH24_017361 [Malus domestica]	[more]

BLAST of MC04g0116.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1R3H527	2.55e-161	75.54	Ribosomal protein L5 OS=Corchorus olitorius OX=93759 GN=COLO4_31259 PE=3 SV=1	[more]
A0A1R3I0M6	5.57e-161	75.23	Ribosomal protein L5 OS=Corchorus capsularis OX=210143 GN=CCACVL1_15847 PE=3 SV=...	[more]
A0A498JUC1	2.46e-159	73.60	RING-CH-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_01139...	[more]
A0A7J7E2C7	2.69e-156	72.56	60S ribosomal protein L11 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW01G0073...	[more]
A0A498IS72	2.78e-153	72.93	RING-CH-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_01736...	[more]

BLAST of MC04g0116.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42740.1	1.1e-97	96.13	ribosomal protein large subunit 16A	[more]
AT3G58700.1	1.1e-97	96.13	Ribosomal L5P family protein	[more]
AT4G18730.1	1.1e-97	96.13	ribosomal protein L16B	[more]
AT5G45775.2	1.1e-97	96.13	Ribosomal L5P family protein	[more]
AT5G45775.1	2.4e-92	95.93	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 82..134 e-value: 1.6E-12 score: 57.6
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 83..133 e-value: 5.4E-8 score: 32.8
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 75..140 score: 19.718292
IPR031309	Ribosomal protein L5, C-terminal	PFAM	PF00673	Ribosomal_L5_C	coord: 255..353 e-value: 4.3E-20 score: 71.7
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 190..366 e-value: 1.4E-71 score: 241.7
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 197..362
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 66..145 e-value: 1.5E-15 score: 58.5
IPR031310	Ribosomal protein L5, N-terminal	PFAM	PF00281	Ribosomal_L5	coord: 198..251 e-value: 2.9E-20 score: 72.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	PANTHER	PTHR11994:SF31	60S RIBOSOMAL PROTEIN L11-1	coord: 178..370
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 77..137
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 178..370
IPR020929	Ribosomal protein L5, conserved site	PROSITE	PS00358	RIBOSOMAL_L5	coord: 228..244

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC04g0116	MC04g0116	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC04g0116.1-utr5	MC04g0116.1-utr5-MC04:861696..862143	utr5
MC04g0116.1-utr5	MC04g0116.1-utr5-MC04:862246..862343	utr5
MC04g0116.1-utr5	MC04g0116.1-utr5-MC04:862482..862682	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC04g0116.1-cds	MC04g0116.1-cds-MC04:862683..863065	CDS
MC04g0116.1-cds	MC04g0116.1-cds-MC04:863167..863353	CDS
MC04g0116.1-cds	MC04g0116.1-cds-MC04:867968..868075	CDS
MC04g0116.1-cds	MC04g0116.1-cds-MC04:868169..868211	CDS
MC04g0116.1-cds	MC04g0116.1-cds-MC04:868489..868684	CDS
MC04g0116.1-cds	MC04g0116.1-cds-MC04:869136..869334	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC04g0116.1-utr3	MC04g0116.1-utr3-MC04:869335..869664	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC04g0116.1	MC04g0116.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003723	RNA binding