MC03g_new0241.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0241.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 10931342 .. 10934781 (+)
Sequence length	498
RNA-Seq Expression	MC03g_new0241.1
Synteny	MC03g_new0241.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGAGCGGTGTTCACCACTAAGCTAGGCAGTTCGTCTGGGACGACCGACTCACCCTCCTACCAACATTGCCAGACAGAGGTTCTTCCTAAGATGGTTCCTTCTGCCAACGTCGAGCGCAATATCTTCTCTGGGCTCTTTGATTTACAGAGGGTACCATCCTTTTGCTTTTCGATATATGTATTCTCTTATTTTTCTGCTCATCTCCAATATACTTATCTATCTTCTTGTGCCTCTGTCAGCTTGATATGAGGACAAGCGCAGTGGTGTTTCGTATAGGGTCTAAGCTTCAACATGTTTATGCAGCGAAAGCTGCGGTAGATAGAGTCGCTGAGGGGCACAAGTCTAGCTACACTTAGCAAACCTCAAGTGGGTGGAGGTAGAGGCATCTTTAGAGAAGTCTAAGGCAGCACGTCCTTGGCTGAAATGGAACTTTTGCGAGTGGAATTGGAACGTTGTCAGGCAGAAAGGATTGTAGAGCGAGAGGCTCTCTTATCTGATTGGAAGGAAGCTTGAAACTAGAGGCAGCGTTATGTTCGATAAGGGCCTATGATAGGCTCTAGAGTGACATCATGAAATTTAGTATAGATTGGATGGAGGTAAAGATGGAGGAAACTCACCTAGGGGTTGATGTGAGCTTTCTAAATGCTACATTGGAGGTCGATGAATGATCCTTCTAAAGTTGTTCACCCACCCAACGAGCATCCACTTGAATTTATGCGATCCAAGGGGATATTTTATATAATATGGCGGTTGTTTTCTATAAATCTTGTTAAAACGTAATTTGGGAGGCCAATCGAACCGGGTAGTCCGGATTTGACCCGTTGGGTAGTTAAATATTAGGGAATAGCAAATTCTTGACTTGAATAACTGGATCGTAGATCATGGATGACCTGTAAAAAAAAGAAGATTGAGCTAATGCCAGCGTGGTGTCGGGTAACACACTTTAAAGCTTAAGTAAGTGAAAAATGTGGAAGACAATATAATGTTAGTTTTGGAATTAAGAGAAGAAAAGTCAGTTACCCCATTTGCTTAGGGGACCGCTGCATTTATAGGGGTCCCACTGCTTCCTTTCTAAGCCACTAGGGAGAATTAACTCATGCTTGTCGTCACAGTACCTCGTCAGCCACAAGGGACTGTGGTGGTGATGTGGGGGTGCAGGCTCTTAGGTGCGATCCTGACTGTGGTGGTGATGTGGGGGTGCAGGCTCTTAGGTGCGATATGTTGGATCGGTACGACAACCGGGGGTGAATAGGGTTTAATGAAACTTTTTAAACTTTTTACTACGATGGGCCCAATTTAAACAATTATATAAACTTTTTATGAACAAATTATTTTAACACAAAATTAAACAACAAATTAGAAATACAAACACCCTAATTAATTTCACCACCCAAATAATTCAAATATAAATATTGAGCATAAATATGATTAATAAATTCGAACAATTAATTTCATGCAATTTGTAATAAAGAAAATTAATTGCAAAAATTAAATAGAGTAGGGTTAGAGAAAATTACACCGAAAATTTTATAGTGGTTTGGCAACAACCGGCCTACTCCACTCCCTAAGCGCCTCTTGGTATTCGATTAAGAAACTTTGACTCTTTCCATGGTAGGAGTCAAACCGGTACAAAGTCTTCTTTTTCCTAGAGCAAGAAGAAACATGATCATTTCCACAGTTCAAGATCAAATCGTTATAAATGATATTTTTCGGGCTCAAGAGCAACCCTTACAAAGAATATGAAAATTTGATAACAAACTTACAAACTCTCTCAAAGAGTAGATATACAAATTTTTGCTCACAAATTTGTAAGAAAAATTCTTACAAATAAAAGCCTTCAAATGGCTAAGAGAAATAAAATTGGAAGCACTAATATCTCTCAAATAAAAAAATTTATCTCACAAGAAATTAGAACAACATTTGAAATTTTGGAAAGATGAACATGAAGAGATTGAAGAGAAAATTGGAGAGGAAAGTTGTTGAAATTTTGAGAGAAGAAGAGTTGATTAAATAGGGGGAAAAAGGATTGAAATTGATTTGAAACCAAAATCAATTTGGACAATTAGATTTCAAATGATTAAAGATGAAAATTTGAGATTTAATGGAATAAAATAATAATAATAATAAAATATTATATATGGATATGTGAAACGGCTCTATATATATATAATATAATATATATAAATTTTTTTAAACAAATATGTATTTAATGTGATGTGACATATATATATATATATATTACTTTTTATTTTTTTCTTTCTTTTAAGTTACTTCAAGGGTAACTTTATTTTTTTTTTAACATCATGCCACATGGACCACTTACTTGATTTAGCTGCTACGTCATCCATCTCGGGTTATTTTTCTTTTAACTTCTTTCGATCATAATTTCTTCGTTTGAGCTCCAATTTGGGTAATTCAAAATCCGTTGGAATCATCGTATCGAGCTCTACGCTGTGAACACTTTAAAACACTAAAATTATCAATAAATAAAATATATATTATCAGTAAATCATATAATATTATTGAAGCTCATAATAAATTTATGTTTATTCTTACACACAAAAAACAATTAATACTAAGTGTGTTTGTTATCATCAAAACACTAATTAATTAAATTAATTAACCAAGATGAAGGGCCAAAAAGCCAACACGATCGTCATGGTGTGCCCGTTACCTGGACTGCGGTTACGCAACCCATCAAGGAGGGTGCAGGCTCTTAGGTTCGATCGTCGTGGCGTGCCCGCTACTTGGACCGCGGTTACGCAACCCATCAAGGAGGGGTGCAGGCCCTTGAGTGTGGGAGCGTCTCCTCAGGTAGAGGAGAGAGAGTGTGTGGATTGGGGTGACGCCTCCTCAAATAGAGGAAAGAGTAGGGGTGTTCACGGGTTGGGTGGGTTGGGTCGGATTAGGGGTACTTTTAGGACCAAACCAAATTTTTGGGTTGGCCATATATGGGAACCGACACGTTAAAAATTGATGGCCAACCCAACCCAACCCAAAAATTTTAGGTCGGGTCGGGTCGGGTTGTCGGCTTGTCCCTTTTTTTTATTTTATTGTTTATATCCTAGACGAAAAAAAAGTGTAAAAAAATCAAAATAGGAGAATCGAAGATGATTATCTTTTTTCCAAATCTTCCAAATCTCCCAAATTTACAGTTTGAAATATAAAGCAAAAGGGAGAGAAAAAAATCATCTGCTCACTAAATATAAAGCAAAAAAACAAAAACGGAAGATCCTCTACGCGAAAAAAAAGAGAATGAGATGATTCATTCCTCCTCCCCACTTCAAATCAGTGGTGAAGGAGGTCTGCGATGGGACGATGAGGGCACGGGCGACGATTGCGACGGGACAAAGGGCGGCGGCAGCCGCGGGTGCAGCGGGCAGTGGGTGGCGACGAAATTGCAGGGACGACGATGGGTGCAGCAATATGCTTGA

mRNA sequence

ATGAAACGAGCGGTGTTCACCACTAAGCTAGGCAGTTCGTCTGGGACGACCGACTCACCCTCCTACCAACATTGCCAGACAGAGGTTCTTCCTAAGATGGTTCCTTCTGCCAACGTCGAGCGCAATATCTTCTCTGGGCTCTTTGATTTACAGAGGCTTGATATGAGGACAAGCGCAGTGGTGTTTCGTATAGGGTCTAAGCTTCAACATGTTTATGCAGCGAAAGCTGCGGTAGATAGAGTCGCTGAGGGGCACAATACCTCGTCAGCCACAAGGGACTGTGGTGGTGATGTGGGGGTGCAGGCTCTTAGGTGCGATCCTGACTGTGGTGGTGATGTGGGGGTGCAGGCTCTTAGTGGTGAAGGAGGTCTGCGATGGGACGATGAGGGCACGGGCGACGATTGCGACGGGACAAAGGGCGGCGGCAGCCGCGGGTGCAGCGGGCAGTGGGTGGCGACGAAATTGCAGGGACGACGATGGGTGCAGCAATATGCTTGA

Coding sequence (CDS)

ATGAAACGAGCGGTGTTCACCACTAAGCTAGGCAGTTCGTCTGGGACGACCGACTCACCCTCCTACCAACATTGCCAGACAGAGGTTCTTCCTAAGATGGTTCCTTCTGCCAACGTCGAGCGCAATATCTTCTCTGGGCTCTTTGATTTACAGAGGCTTGATATGAGGACAAGCGCAGTGGTGTTTCGTATAGGGTCTAAGCTTCAACATGTTTATGCAGCGAAAGCTGCGGTAGATAGAGTCGCTGAGGGGCACAATACCTCGTCAGCCACAAGGGACTGTGGTGGTGATGTGGGGGTGCAGGCTCTTAGGTGCGATCCTGACTGTGGTGGTGATGTGGGGGTGCAGGCTCTTAGTGGTGAAGGAGGTCTGCGATGGGACGATGAGGGCACGGGCGACGATTGCGACGGGACAAAGGGCGGCGGCAGCCGCGGGTGCAGCGGGCAGTGGGTGGCGACGAAATTGCAGGGACGACGATGGGTGCAGCAATATGCTTGA

Protein sequence

MKRAVFTTKLGSSSGTTDSPSYQHCQTEVLPKMVPSANVERNIFSGLFDLQRLDMRTSAVVFRIGSKLQHVYAAKAAVDRVAEGHNTSSATRDCGGDVGVQALRCDPDCGGDVGVQALSGEGGLRWDDEGTGDDCDGTKGGGSRGCSGQWVATKLQGRRWVQQYA

Homology

The following BLAST results are available for this feature:

BLAST of MC03g_new0241.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0241.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0241.1 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0241.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC03g_new0241	MC03g_new0241	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC03g_new0241.1-cds	MC03g_new0241.1-cds-MC03:10931342..10931497	CDS
MC03g_new0241.1-cds	MC03g_new0241.1-cds-MC03:10931587..10931687	CDS
MC03g_new0241.1-cds	MC03g_new0241.1-cds-MC03:10932460..10932558	CDS
MC03g_new0241.1-cds	MC03g_new0241.1-cds-MC03:10934640..10934781	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC03g_new0241.1	MC03g_new0241.1-protein	polypeptide