MC01g1422.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1422.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Squamosa promoter-binding-like protein
Location	MC01: 18805959 .. 18808373 (+)
Sequence length	1355
RNA-Seq Expression	MC01g1422.1
Synteny	MC01g1422.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCATATATGTTTTTAACAGTTCAGCGAAAGATGTCTATGATTGGATAAGAGAGAATCCTCCAAAACTAAAAGCAAAAATCTTTGGAAATTTCTAGACCAAAATTGTAATTTTAACTATTTTTTGCTAATGGAAAGTAAAAAAAGAAAACCAAAGAAAAAGGAAAAAAAGGGAAGGTGTGGTCCTTCACTTCTCTTGTCGCTTCCATTTTAGTTTATGTATATATATAGTGATATGGTTTTGCTGAGTTGCTCCAAATTGGTTAATTGTCTGAAAAATGGCATCTTGGGGGGGCACGCCTGAAGAGGATGAGGAGGAGGAGGAAGAAGACGGCGGCGGCGGCGGAGAAGTAGGGTTTGGGGAAGAGGAGAGAAAGATCAGGAGAGCTTTAAGCGGCGGTCGGTGTGGCGGAGCAGGGAGGTCAACGGTGGCGCGTTGCCAAGCCGACGGCTGTAATGCCGATCTGAGCGGCGCCCGGCCGTACCACCGCCGCCACAAGGTCTGTGAGTTCCATGCCAAGGCGGCGGTCGTCATTTTGGCCGGATTGGAGCAGCGCTTTTGCCAGCAGTGTAGCAGGTACAAATTTTAAAAATTAAAATTAAAACAAAACCCTAATCTGTATCATCTGTTTTAAAATATAATTTAGTACTTGTAGCTTCTAAGGCCTAAAACCTAAATTTGAATTTGATCCTTTTTTTCTTCTCCCGTTTCAAAGCAGTGAGGAATGTGGCGAAATTGAAAACTTAAAACAAGTACTGTTTTTGAGTTTTGGAAATTAATAATTAACTTTTTAAGTTAGCTCAAATAATCAAATTCATTCTACATTACATTATGTACAGTGTGTTTGGAGATCTATTATTCCATATTTTATAAATATTTTTCCACTAGTTTGAAGTACTTGTGAAGTGAACACAGTATATATATTTTTCACTACTTAATTAAGAATAATACTTTTTTCTTTGTTTCACTACATATGGAATGAAGTGTTAGGTGAGTTAATTTCAATTTTAAACTTTCCTTAAACTTGTGTATATAGTTAAATTAATACTCTTAATTAATTCTTTTTTATTTATTTATTTATAAACACTTGTGGCGTGTTTTTGTTAAGTGATTTACTATATTAATTGTCATTTTAGAATATATAGCATTTTGAAAGAAGAAAAATTATACATTTTGAGGGGAATTCAAGATATCTTGTTTTAGTACCGTATTAAACCATCAATAAATTCAAAAGCTTAAATTGATGTCTACTTAATATTTTATATATGGAAATTTTCTTATAAAACAAAATAAGTGTGTTTTGTTGAGGTAGGAGAGGTTACATTATTATTATTTAAGGGGAGTATACTTGAATTAGATAATCAATTTTAACTTTGAAACTTTTAATTTTTTTTTTCAATTTAAACTTATTATACTTGAACAAAAGTGTTCAATTAGTTAAATTTCTATTTTTCTTTGAAGATTATAATTAGTTTGATTTGGGCACTTTCTTTCCTTGTTAAGTGTATTTTGGGCGTTTCATTATAGTCGAAATTTGTTTGGTTTATGAACAAATTTTCTAATTTAATTTTTGAAAAAAAGGTTGAAATTGGTTGATAATGTGTTTGACCATATTAGCTAAACTATTAAATTTCAGGTTTCATGCGGTTTCAGAGTTCGATGAGACCAAGAGAAGCTGCCGGAGGCGTTTGGCCGGACACAACGAACGCCGGCGAAAAAGCTTATCCTCGGAGTTCCATGGCGGACAATCCTCCACCTGATCCACAAAAGACAACCGCCGCCTCCGCCGCCGCCTCGCCGGTTGGTTGGTTTCTGAAGAAGAAGAAGAAGAAGAAAAAATATATTATAATTTTCATAAGAGATGAAGGAATCGGATGAGCTTTAATTTGAGAAATTGATGAAAATTAAAATGAATTAGATGCTCTCTCTCTCCTGTCAATTCCTATGGCTGTCTGCAAACTTTTTTTTTTTTTTTCTCTCTTTTTTTGTAGTGACTATTAACTTGTGTGTAGGGCAAAGTTTCCAGATGCTGCTTTCTGCGTAGGTCACATCAGTTAAATCTGGGTTTAAATAGATTGTCTTTTTGTGGAAGTCGGCTGTGCTTTAATTTTAGGCTAAATACATGTTTTATTTTTGGATGTTTTTTATGTTGTTTCAACTTAGTCACTTTCTAAGTGGAACATTTGGATTTAGTTTTTATATTTTTAATAGTTTTTAATTATATATTCATTCTGCCGTTTGAAGGTTAAAAAGTTGGATGTGATCATGAAACGGGAGAGATGTTGAATGTTTCTAATAGACGATACCATATATTAGAAGAGATGTAGGAGACTGTCATGTGTTATATTTGATTGGGAAGAAATAATAGATTGTTCTCAAATGTTTTTAGATCAGTAGATCAACTTTAATTAAGAC

mRNA sequence

ATTCATATATGTTTTTAACAGTTCAGCGAAAGATGTCTATGATTGGATAAGAGAGAATCCTCCAAAACTAAAAGCAAAAATCTTTGGAAATTTCTAGACCAAAATTGTAATTTTAACTATTTTTTGCTAATGGAAAGTAAAAAAAGAAAACCAAAGAAAAAGGAAAAAAAGGGAAGGTGTGGTCCTTCACTTCTCTTGTCGCTTCCATTTTAGTTTATGTATATATATAGTGATATGGTTTTGCTGAGTTGCTCCAAATTGGTTAATTGTCTGAAAAATGGCATCTTGGGGGGGCACGCCTGAAGAGGATGAGGAGGAGGAGGAAGAAGACGGCGGCGGCGGCGGAGAAGTAGGGTTTGGGGAAGAGGAGAGAAAGATCAGGAGAGCTTTAAGCGGCGGTCGGTGTGGCGGAGCAGGGAGGTCAACGGTGGCGCGTTGCCAAGCCGACGGCTGTAATGCCGATCTGAGCGGCGCCCGGCCGTACCACCGCCGCCACAAGGTCTGTGAGTTCCATGCCAAGGCGGCGGTCGTCATTTTGGCCGGATTGGAGCAGCGCTTTTGCCAGCAGTGTAGCAGGTTTCATGCGGTTTCAGAGTTCGATGAGACCAAGAGAAGCTGCCGGAGGCGTTTGGCCGGACACAACGAACGCCGGCGAAAAAGCTTATCCTCGGAGTTCCATGGCGGACAATCCTCCACCTGATCCACAAAAGACAACCGCCGCCTCCGCCGCCGCCTCGCCGGTTGGTTGGTTTCTGAAGAAGAAGAAGAAGAAGAAAAAATATATTATAATTTTCATAAGAGATGAAGGAATCGGATGAGCTTTAATTTGAGAAATTGATGAAAATTAAAATGAATTAGATGCTCTCTCTCTCCTGTCAATTCCTATGGCTGTCTGCAAACTTTTTTTTTTTTTTTCTCTCTTTTTTTGTAGTGACTATTAACTTGTGTGTAGGGCAAAGTTTCCAGATGCTGCTTTCTGCGTAGGTCACATCAGTTAAATCTGGGTTTAAATAGATTGTCTTTTTGTGGAAGTCGGCTGTGCTTTAATTTTAGGCTAAATACATGTTTTATTTTTGGATGTTTTTTATGTTGTTTCAACTTAGTCACTTTCTAAGTGGAACATTTGGATTTAGTTTTTATATTTTTAATAGTTTTTAATTATATATTCATTCTGCCGTTTGAAGGTTAAAAAGTTGGATGTGATCATGAAACGGGAGAGATGTTGAATGTTTCTAATAGACGATACCATATATTAGAAGAGATGTAGGAGACTGTCATGTGTTATATTTGATTGGGAAGAAATAATAGATTGTTCTCAAATGTTTTTAGATCAGTAGATCAACTTTAATTAAGAC

Coding sequence (CDS)

ATGGCATCTTGGGGGGGCACGCCTGAAGAGGATGAGGAGGAGGAGGAAGAAGACGGCGGCGGCGGCGGAGAAGTAGGGTTTGGGGAAGAGGAGAGAAAGATCAGGAGAGCTTTAAGCGGCGGTCGGTGTGGCGGAGCAGGGAGGTCAACGGTGGCGCGTTGCCAAGCCGACGGCTGTAATGCCGATCTGAGCGGCGCCCGGCCGTACCACCGCCGCCACAAGGTCTGTGAGTTCCATGCCAAGGCGGCGGTCGTCATTTTGGCCGGATTGGAGCAGCGCTTTTGCCAGCAGTGTAGCAGGTTTCATGCGGTTTCAGAGTTCGATGAGACCAAGAGAAGCTGCCGGAGGCGTTTGGCCGGACACAACGAACGCCGGCGAAAAAGCTTATCCTCGGAGTTCCATGGCGGACAATCCTCCACCTGA

Protein sequence

MASWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHGGQSST

Homology

[Close]

BLAST of MC01g1422.1 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-30
Identity = 72/121 (59.50%), Postives = 85/121 (70.25%), Query Frame = 0


Query: 8   PEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCNADLSGAR 67
           P   E+ EEED         GE+ +K R     G+   A  ST   CQ + C A+++ A+
Sbjct: 15  PGSQEQGEEED-------DIGEDSKKTRALTPSGK--RASGSTQRSCQVENCAAEMTNAK 74

Query: 68  PYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRK 127
           PYHRRHKVCEFHAKA VV+ +GL+QRFCQQCSRFH +SEFDE KRSCRRRLAGHNERRRK
Sbjct: 75  PYHRRHKVCEFHAKAPVVLHSGLQQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRK 126

Query: 128 S 129
           S
Sbjct: 135 S 126

[Close]

BLAST of MC01g1422.1 vs. ExPASy Swiss-Prot
Match: Q8GXL3 (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 5.4e-29
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 33  KIRRALSGGRCGGAGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKAAVVILAGLEQ 92
           ++ R    G  G A   +  RCQA+GCNADLS A+ YHRRHKVCEFH+KA+ V+ AGL Q
Sbjct: 167 RLYRRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQ 226

Query: 93  RFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRK 128
           RFCQQCSRFH +SEFD  KRSCR+RLA HN RRRK
Sbjct: 227 RFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRK 261

[Close]

BLAST of MC01g1422.1 vs. ExPASy Swiss-Prot
Match: P93015 (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28
Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 9   EEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCNADLSGARP 68
           EE+EEEE ED     E  F EEE   ++        G   S+   CQ + C AD+S A+ 
Sbjct: 20  EEEEEEETED-----EDTFEEEEALEKKQ------KGKATSSSGVCQVESCTADMSKAKQ 79

Query: 69  YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKS 128
           YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFHA+SEFDE KRSCRRRLAGHNERRRKS
Sbjct: 80  YHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSCRRRLAGHNERRRKS 128

[Close]

BLAST of MC01g1422.1 vs. ExPASy Swiss-Prot
Match: Q0E3F8 (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.8e-28
Identity = 70/121 (57.85%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 19  GGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCNADLSGARPYHRRHKVCEF 78
           GG G E+G G         L  G    A      RCQA+GC ADLS A+ YHRRHKVC+F
Sbjct: 178 GGMGMEMGMG------MGVLGLGLAAAAHHHQPPRCQAEGCKADLSAAKHYHRRHKVCDF 237

Query: 79  HAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHGGQS 138
           HAKAA V+ AG +QRFCQQCSRFH ++EFDE KRSCR+RL  HN RRRK  +    GGQS
Sbjct: 238 HAKAAAVLAAGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRRRKPTA----GGQS 288

Query: 139 S 140
           S
Sbjct: 298 S 288

[Close]

BLAST of MC01g1422.1 vs. ExPASy Swiss-Prot
Match: Q9S7A9 (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 29  EEERKIRRALSGGRCGGAGRSTVAR-CQADGCNADLSGARPYHRRHKVCEFHAKAAVVIL 88
           +EE ++ R    G  G   R    R CQ D C AD+  A+ YHRRHKVCE HAKA+ V L
Sbjct: 28  DEEEEVGRDRVRGSRGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFL 87

Query: 89  AGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHG 136
           +GL QRFCQQCSRFH + EFDE KRSCRRRLAGHNERRRKS     +G
Sbjct: 88  SGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYG 135

[Close]

BLAST of MC01g1422.1 vs. NCBI nr
Match: XP_022142195.1 (squamosa promoter-binding protein 1 [Momordica charantia])

HSP 1 Score: 275 bits (704), Expect = 3.51e-93
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MASWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCN 60
           MASWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCN
Sbjct: 1   MASWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCN 60

Query: 61  ADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAG 120
           ADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAG
Sbjct: 61  ADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAG 120

Query: 121 HNERRRKSLSSEFHGGQSST 140
           HNERRRKSLSSEFHGGQSST
Sbjct: 121 HNERRRKSLSSEFHGGQSST 140

[Close]

BLAST of MC01g1422.1 vs. NCBI nr
Match: XP_038880830.1 (squamosa promoter-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 187 bits (475), Expect = 2.91e-58
Identity = 103/128 (80.47%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 14  EEEEDGGGGGEVGFGEEERKIRRALSGGRCG-GAGRSTVARCQADGCNADLSGARPYHRR 73
           EE++D     E+GF E+ER+ R AL+GGR G G GR TVARCQADGCNADLS ARPYHRR
Sbjct: 15  EEDDDNDDNEEIGFVEDERRRRSALTGGRGGSGGGRVTVARCQADGCNADLSCARPYHRR 74

Query: 74  HKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSE 133
           HKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFD+TKRSCRRRLAGHNERRRK L  +
Sbjct: 75  HKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILP-D 134

Query: 134 FHGGQSST 140
           FHG QSST
Sbjct: 135 FHG-QSST 140

[Close]

BLAST of MC01g1422.1 vs. NCBI nr
Match: XP_023004048.1 (squamosa promoter-binding-like protein 3 [Cucurbita maxima])

HSP 1 Score: 183 bits (464), Expect = 1.37e-56
Identity = 105/138 (76.09%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 4   WGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCG-GAGRSTVARCQADGCNAD 63
           WG   EE+EEEEEED     EVGF E+ERK +RA+S  R G G GR++VARCQAD CN D
Sbjct: 9   WGDPVEEEEEEEEEDDD--DEVGFVEDERK-KRAVSSSRSGSGGGRTSVARCQADSCNVD 68

Query: 64  LSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHN 123
           L+GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFH+VSEFDETKRSCRRRLAGHN
Sbjct: 69  LNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRRRLAGHN 128

Query: 124 ERRRKSLSSEFHGGQSST 140
           ERRRK+L  +F G QSST
Sbjct: 129 ERRRKNLP-DFQG-QSST 141

[Close]

BLAST of MC01g1422.1 vs. NCBI nr
Match: XP_008439842.1 (PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo])

HSP 1 Score: 182 bits (461), Expect = 4.06e-56
Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 24  EVGFGEEERKIRRALSGGRCGGAG-RSTVARCQADGCNADLSGARPYHRRHKVCEFHAKA 83
           EVGF + ER+ R  L+ GR GG G RSTVARCQADGCNADL+GARPYHRRHKVCEFHAKA
Sbjct: 26  EVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKA 85

Query: 84  AVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHGGQSST 140
           AVVILAGLEQRFCQQCSRFHAVSEFD+TKRSCR RLAGHNERRRK L  +FHG QSST
Sbjct: 86  AVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILP-DFHG-QSST 141

[Close]

BLAST of MC01g1422.1 vs. NCBI nr
Match: KAG7026565.1 (Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182 bits (461), Expect = 4.19e-56
Identity = 102/138 (73.91%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 4   WGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCG-GAGRSTVARCQADGCNAD 63
           WG   EE+EEEEE+D     E+GF ++ERK +RA SG R G G GR++V RCQAD CN D
Sbjct: 9   WGEPVEEEEEEEEDDDDDDDEIGFVKDERK-KRAASGSRSGSGGGRTSVPRCQADSCNVD 68

Query: 64  LSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHN 123
           L+GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFH+VSEFDETKRSCRRRLAGHN
Sbjct: 69  LNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRRRLAGHN 128

Query: 124 ERRRKSLSSEFHGGQSST 140
           ERRRK+L  +F G QSST
Sbjct: 129 ERRRKNLP-DFQG-QSST 143

[Close]

BLAST of MC01g1422.1 vs. ExPASy TrEMBL
Match: A0A6J1CK81 (squamosa promoter-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC111012368 PE=4 SV=1)

HSP 1 Score: 275 bits (704), Expect = 1.70e-93
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MASWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCN 60
           MASWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCN
Sbjct: 1   MASWGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCN 60

Query: 61  ADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAG 120
           ADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAG
Sbjct: 61  ADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAG 120

Query: 121 HNERRRKSLSSEFHGGQSST 140
           HNERRRKSLSSEFHGGQSST
Sbjct: 121 HNERRRKSLSSEFHGGQSST 140

[Close]

BLAST of MC01g1422.1 vs. ExPASy TrEMBL
Match: A0A6J1KYC6 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497471 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 6.65e-57
Identity = 105/138 (76.09%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 4   WGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCG-GAGRSTVARCQADGCNAD 63
           WG   EE+EEEEEED     EVGF E+ERK +RA+S  R G G GR++VARCQAD CN D
Sbjct: 9   WGDPVEEEEEEEEEDDD--DEVGFVEDERK-KRAVSSSRSGSGGGRTSVARCQADSCNVD 68

Query: 64  LSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHN 123
           L+GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFH+VSEFDETKRSCRRRLAGHN
Sbjct: 69  LNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRRRLAGHN 128

Query: 124 ERRRKSLSSEFHGGQSST 140
           ERRRK+L  +F G QSST
Sbjct: 129 ERRRKNLP-DFQG-QSST 141

[Close]

BLAST of MC01g1422.1 vs. ExPASy TrEMBL
Match: A0A1S3AZN8 (squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4 SV=1)

HSP 1 Score: 182 bits (461), Expect = 1.97e-56
Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 24  EVGFGEEERKIRRALSGGRCGGAG-RSTVARCQADGCNADLSGARPYHRRHKVCEFHAKA 83
           EVGF + ER+ R  L+ GR GG G RSTVARCQADGCNADL+GARPYHRRHKVCEFHAKA
Sbjct: 26  EVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKA 85

Query: 84  AVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHGGQSST 140
           AVVILAGLEQRFCQQCSRFHAVSEFD+TKRSCR RLAGHNERRRK L  +FHG QSST
Sbjct: 86  AVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILP-DFHG-QSST 141

[Close]

BLAST of MC01g1422.1 vs. ExPASy TrEMBL
Match: A0A6J1EFR3 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433770 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 2.88e-56
Identity = 102/138 (73.91%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 4   WGGTPEEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCG-GAGRSTVARCQADGCNAD 63
           WG   EE+EEEEEE+     E+GF ++ERK +RA SG R G G GR++V RCQAD CN D
Sbjct: 9   WGEPVEEEEEEEEEEDDDDDEIGFVKDERK-KRAASGSRSGSGGGRTSVPRCQADSCNVD 68

Query: 64  LSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHN 123
           L+GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFH+VSEFDETKRSCRRRLAGHN
Sbjct: 69  LNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRRRLAGHN 128

Query: 124 ERRRKSLSSEFHGGQSST 140
           ERRRK+L  +F G QSST
Sbjct: 129 ERRRKNLP-DFQG-QSST 143

[Close]

BLAST of MC01g1422.1 vs. ExPASy TrEMBL
Match: A0A0A0KK74 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 7.36e-54
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 24  EVGFGEEERKIRRALSGGRCGGAG-RSTVARCQADGCNADLSGARPYHRRHKVCEFHAKA 83
           E+GF + ER+ R  L+  R GG G RSTVARCQADGCNADL+GA+PYHRRHKVCEFH++A
Sbjct: 25  EIGFVDNERRRRSGLTSARGGGGGGRSTVARCQADGCNADLTGAKPYHRRHKVCEFHSRA 84

Query: 84  AVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHGGQSST 140
           AVVILAGLEQRFCQQCSRFHA+SEFD+TKRSCR RLAGHNERRRK L  +FHG QSST
Sbjct: 85  AVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMRLAGHNERRRKILP-DFHG-QSST 140

[Close]

BLAST of MC01g1422.1 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 128.6 bits (322), Expect = 3.8e-30
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 33  KIRRALSGGRCGGAGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKAAVVILAGLEQ 92
           ++ R    G  G A   +  RCQA+GCNADLS A+ YHRRHKVCEFH+KA+ V+ AGL Q
Sbjct: 167 RLYRRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQ 226

Query: 93  RFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRK 128
           RFCQQCSRFH +SEFD  KRSCR+RLA HN RRRK
Sbjct: 227 RFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRK 261

[Close]

BLAST of MC01g1422.1 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29
Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 9   EEDEEEEEEDGGGGGEVGFGEEERKIRRALSGGRCGGAGRSTVARCQADGCNADLSGARP 68
           EE+EEEE ED     E  F EEE   ++        G   S+   CQ + C AD+S A+ 
Sbjct: 20  EEEEEEETED-----EDTFEEEEALEKKQ------KGKATSSSGVCQVESCTADMSKAKQ 79

Query: 69  YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKS 128
           YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFHA+SEFDE KRSCRRRLAGHNERRRKS
Sbjct: 80  YHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSCRRRLAGHNERRRKS 128

[Close]

BLAST of MC01g1422.1 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 124.0 bits (310), Expect = 9.4e-29
Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 29  EEERKIRRALSGGRCGGAGRSTVAR-CQADGCNADLSGARPYHRRHKVCEFHAKAAVVIL 88
           +EE ++ R    G  G   R    R CQ D C AD+  A+ YHRRHKVCE HAKA+ V L
Sbjct: 28  DEEEEVGRDRVRGSRGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFL 87

Query: 89  AGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHG 136
           +GL QRFCQQCSRFH + EFDE KRSCRRRLAGHNERRRKS     +G
Sbjct: 88  SGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYG 135

[Close]

BLAST of MC01g1422.1 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 124.0 bits (310), Expect = 9.4e-29
Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 29  EEERKIRRALSGGRCGGAGRSTVAR-CQADGCNADLSGARPYHRRHKVCEFHAKAAVVIL 88
           +EE ++ R    G  G   R    R CQ D C AD+  A+ YHRRHKVCE HAKA+ V L
Sbjct: 28  DEEEEVGRDRVRGSRGSINRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFL 87

Query: 89  AGLEQRFCQQCSRFHAVSEFDETKRSCRRRLAGHNERRRKSLSSEFHG 136
           +GL QRFCQQCSRFH + EFDE KRSCRRRLAGHNERRRKS     +G
Sbjct: 88  SGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYG 135

[Close]

BLAST of MC01g1422.1 vs. TAIR 10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27
Identity = 54/74 (72.97%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 54  CQADGCNADLSGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDETKRS 113
           CQ  GC+ DLS ++ YH+RH+VCE H+K +VVI+ GLEQRFCQQCSRFH +SEFD+ KRS
Sbjct: 124 CQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRS 183

Query: 114 CRRRLAGHNERRRK 128
           CRRRLAGHNERRRK
Sbjct: 184 CRRRLAGHNERRRK 197

The following BLAST results are available for this feature:

BLAST of MC01g1422.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38741	3.7e-30	59.50	Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV...	[more]
Q8GXL3	5.4e-29	65.26	Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8...	[more]
P93015	2.0e-28	60.00	Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=SPL3...	[more]
Q0E3F8	7.8e-28	57.85	Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9S7A9	1.3e-27	60.19	Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4...	[more]

BLAST of MC01g1422.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142195.1	3.51e-93	100.00	squamosa promoter-binding protein 1 [Momordica charantia]	[more]
XP_038880830.1	2.91e-58	80.47	squamosa promoter-binding protein 1-like [Benincasa hispida]	[more]
XP_023004048.1	1.37e-56	76.09	squamosa promoter-binding-like protein 3 [Cucurbita maxima]	[more]
XP_008439842.1	4.06e-56	83.05	PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]	[more]
KAG7026565.1	4.19e-56	73.91	Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of MC01g1422.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CK81	1.70e-93	100.00	squamosa promoter-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC1110123...	[more]
A0A6J1KYC6	6.65e-57	76.09	Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114974...	[more]
A0A1S3AZN8	1.97e-56	83.05	squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4...	[more]
A0A6J1EFR3	2.88e-56	73.91	Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A0A0KK74	7.36e-54	77.97	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE...	[more]

BLAST of MC01g1422.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02065.1	3.8e-30	65.26	squamosa promoter binding protein-like 8	[more]
AT2G33810.1	1.5e-29	60.00	squamosa promoter binding protein-like 3	[more]
AT1G53160.2	9.4e-29	60.19	squamosa promoter binding protein-like 4	[more]
AT1G53160.1	9.4e-29	60.19	squamosa promoter binding protein-like 4	[more]
AT1G69170.1	1.8e-27	72.97	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 44..115 e-value: 6.3E-34 score: 117.9
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 52..131
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 54..127 e-value: 3.6E-33 score: 113.7
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 51..128 score: 32.538879
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..24
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 3..130

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC01g1422	MC01g1422	gene

The following utr5 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC01g1422.1-utr5	MC01g1422.1-utr5-MC01:18805959..18806235	utr5

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC01g1422.1-cds	MC01g1422.1-cds-MC01:18806236..18806534	CDS
MC01g1422.1-cds	MC01g1422.1-cds-MC01:18807595..18807718	CDS

The following utr3 feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC01g1422.1-utr3	MC01g1422.1-utr3-MC01:18807719..18808373	utr3

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC01g1422.1	MC01g1422.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding