
MC01g1048.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAATGGTTGTTGCTTTGCTTTTCAAAATCCAAGATCTTCTCTTTTATCGCTTCCTTATTTTGAATTGAATCCCAATTCCAATTCCCCCATTTCAAAATCGAAAACAATATCTTTTCCACTTCCCCTTAACCTTACAACCCCACTTTAGTTCAGTTCCAGCAGAAAACAAAACACTGTGTGACTGTGGGTGTGATACAGAATGGAGAGAACCAAATCATCGGCAAAACCTCGCCCGTCCACCGCCGATCTGCTCACCTGGTCGGAGGTTCCCCCGCCGGAATCTTCCCCCGTCGTCTCCGCTTCCGCCGCTCGCTCCCACCAGGTACACCCTCTTTCTCTACCCCCATTCTTTAGCTTTGGGGCAGCTTGGTTTTGAGGCTTTTGAATGGTACATTCTCAGCCGTCCGATAGAATCAGCAAAGTGCTCCAGGGAGGTCAGCTCACGGATGAAGAAGCTGAGAGCTTGTTGAAAAAGTAAGATCCATTTCCTCCGTTCTAGAAATTTCCCCCAAAAAAATCAGGGATGTGATTGTTGTGATGAAGCTATTACAATGTCTGAGCTGATTTTCCTTAATTTACTTATTTTGTGTTGCTGTTTGTTTGAAATTGAAACCCACAGCTGATCAGATCTCCCAGTTATGTTATTTTTCTTTTTGATTTGTGTTCTGTAGCTGATTTCCTTACTGTTCCTTGTTCTAGCATCTGGAGAACATTTAAGAAACAATTAATTCATATTTATTGCTCTCACACCATACCATTGGTGGAATCTATCTTGTAATATTTCCTTCTTCTGTTCTGTGTTGCTTTACTCATGTTCTGTTTAATTGATGGGCTACAATCCTGTTCCTCAAACAGTCAAACAGTTCATATACGTCATGAGTTATGACCTATTGCTATTTTTTATCTCTAAATTTTCAGTTTTATCGTTTTTACTTTCAGCATTGTTCCTAATAGGCCCATGTCTTTCAAATTTGTGTCACATAGGCCTTAAAGTAAAAAAAAAAAGTCTTATAGTTCTATTAGGCATTTTTGAAGTTGTCTAAATTTAGACAAAAACCACGAAAGGTGAAGGGAACGACTTATAATTTAACCAAATTAAAATTATCCCCCACCATTTTCAGGAAGAATTGTTCAGGGTATAAAATGAAGGAGATGACCGGAAGTGGAATATTTGCAGCTAATGGTGAAGGGGGTACCTCGGAAGCAGATAACAAAACAGGGCTGCGGATGTATCAGGTAAGTAATGATATCATGCCCACTTGGAAATGCATCAAAATTTAGAAGAACCCTTTTTAATTCTTTGAAATCGTTGGATGGTTCCAGCAAACTTTGAACGGAGTTAGCCAAATATCTTTTGCTGCTGAAGAGGGGGTGTCTGCAAAAAAGCCTAGCTCAGTTCCAGAAGTGGCAAAGCAACGTGAGTTAAGTGGAACACTGCAGAGTGAATCTGATGCCAGGAGTAAGAAGCAGATATCAGATGCAAAGAACAAGGAGCTTAGTGGACACGACATCTTCGGAGCTCCTCCTGAAATAACACCGAGATCACTAGCGGCTGCTCGGAGCTTGGAGTCGAAAGAAAGCAAAGACATGGGTGAACCTGCACCTCGGACTCTGAGAACATCAGTTAAAGTTTCAAATGTGAGTTTACTTCTTACCATAACCTCGAATATACTTCTTCTATGATTGTCTTTGTTTTCGCTCTTGTTCGTCTTCGCCGAGGAATTTAAGCTGTTTTTGAATTGTGCACATTTCTTATGAATTAACTTATGTTTTTGTTTACTCTCTGGAGTCAAGGCTGCAGGATTCTTTTTAGCCTTAGCATTGACAAGATTGCTTGCTGTTCATTCACGTCTCTTTTTTGCCTTAGCATTGACAAGATTGCTTGCTGTTCATTCACGTCTCTTTTTTGCCTTAGCATTGACAAGATTGCTTGCTGTTCATTCACGTCTCTTTTTTGCCTTAGCATTGACAAGATTGCTTGCTGTTCATTCACGTCTCTTTTTTTTTTTATCTCCCTATCTTGATAGTCTTTTTAAACTTGATTGAAACATTGAGCTCAGATGTTGAATCCCCCGCTTGCTGTTCATTCACGTCTCTTTTTTTTTTATCTCCCTATCTTGATAGTCTTTTTAAACTTGATTGAAACATTGAGCTCAGATGTTGAATCCCCCACGTTAATGAATGTTGAAGTGCTTTTTCCAATCTAATTCATCCCATGATTACTTCTTTCCTTTATTCTAGCGAGTTGTTCTAGATTGGGAGTAAATTTCTCTATGTCTTGACTTCATCTCTCATATCCTTGCTTCTGAGCCATAAAAACTCAAAATAAGGTGGCTTGTCCATCTTCACAGCCTGCTGGAGGGCAGAGTAATATCCTGTTCGGTGAAGAACCAGTTATGAAGACAGCTAAGAAACTACACAACCAGAAGTTTCAAGAGTTGACTGGTAACGATATATTTAAAGGAGACGCTCCACCGGGTTCGTCTGAGAAATCACTGAGCTCAGCCAAGCTAAGGGAGATGAGCGGCAACGACATCTTTGCTGACGGGAAGGCAGAATCGAGAGACTACTTCGGAGGAGTTCGTAAACCGCCCGGTGGAGAAAGCTCCATATCCTTGGTT CAATGGTTGTTGCTTTGCTTTTCAAAATCCAAGATCTTCTCTTTTATCGCTTCCTTATTTTGAATTGAATCCCAATTCCAATTCCCCCATTTCAAAATCGAAAACAATATCTTTTCCACTTCCCCTTAACCTTACAACCCCACTTTAGTTCAGTTCCAGCAGAAAACAAAACACTGTGTGACTGTGGGTGTGATACAGAATGGAGAGAACCAAATCATCGGCAAAACCTCGCCCGTCCACCGCCGATCTGCTCACCTGGTCGGAGGTTCCCCCGCCGGAATCTTCCCCCGTCGTCTCCGCTTCCGCCGCTCGCTCCCACCAGCCGTCCGATAGAATCAGCAAAGTGCTCCAGGGAGGTCAGCTCACGGATGAAGAAGCTGAGAGCTTGTTGAAAAAGAAGAATTGTTCAGGGTATAAAATGAAGGAGATGACCGGAAGTGGAATATTTGCAGCTAATGGTGAAGGGGGTACCTCGGAAGCAGATAACAAAACAGGGCTGCGGATGTATCAGCAAACTTTGAACGGAGTTAGCCAAATATCTTTTGCTGCTGAAGAGGGGGTGTCTGCAAAAAAGCCTAGCTCAGTTCCAGAAGTGGCAAAGCAACGTGAGTTAAGTGGAACACTGCAGAGTGAATCTGATGCCAGGAGTAAGAAGCAGATATCAGATGCAAAGAACAAGGAGCTTAGTGGACACGACATCTTCGGAGCTCCTCCTGAAATAACACCGAGATCACTAGCGGCTGCTCGGAGCTTGGAGTCGAAAGAAAGCAAAGACATGGGTGAACCTGCACCTCGGACTCTGAGAACATCAGTTAAAGTTTCAAATCCTGCTGGAGGGCAGAGTAATATCCTGTTCGGTGAAGAACCAGTTATGAAGACAGCTAAGAAACTACACAACCAGAAGTTTCAAGAGTTGACTGGTAACGATATATTTAAAGGAGACGCTCCACCGGGTTCGTCTGAGAAATCACTGAGCTCAGCCAAGCTAAGGGAGATGAGCGGCAACGACATCTTTGCTGACGGGAAGGCAGAATCGAGAGACTACTTCGGAGGAGTTCGTAAACCGCCCGGTGGAGAAAGCTCCATATCCTTGGTT ATGGAGAGAACCAAATCATCGGCAAAACCTCGCCCGTCCACCGCCGATCTGCTCACCTGGTCGGAGGTTCCCCCGCCGGAATCTTCCCCCGTCGTCTCCGCTTCCGCCGCTCGCTCCCACCAGCCGTCCGATAGAATCAGCAAAGTGCTCCAGGGAGGTCAGCTCACGGATGAAGAAGCTGAGAGCTTGTTGAAAAAGAAGAATTGTTCAGGGTATAAAATGAAGGAGATGACCGGAAGTGGAATATTTGCAGCTAATGGTGAAGGGGGTACCTCGGAAGCAGATAACAAAACAGGGCTGCGGATGTATCAGCAAACTTTGAACGGAGTTAGCCAAATATCTTTTGCTGCTGAAGAGGGGGTGTCTGCAAAAAAGCCTAGCTCAGTTCCAGAAGTGGCAAAGCAACGTGAGTTAAGTGGAACACTGCAGAGTGAATCTGATGCCAGGAGTAAGAAGCAGATATCAGATGCAAAGAACAAGGAGCTTAGTGGACACGACATCTTCGGAGCTCCTCCTGAAATAACACCGAGATCACTAGCGGCTGCTCGGAGCTTGGAGTCGAAAGAAAGCAAAGACATGGGTGAACCTGCACCTCGGACTCTGAGAACATCAGTTAAAGTTTCAAATCCTGCTGGAGGGCAGAGTAATATCCTGTTCGGTGAAGAACCAGTTATGAAGACAGCTAAGAAACTACACAACCAGAAGTTTCAAGAGTTGACTGGTAACGATATATTTAAAGGAGACGCTCCACCGGGTTCGTCTGAGAAATCACTGAGCTCAGCCAAGCTAAGGGAGATGAGCGGCAACGACATCTTTGCTGACGGGAAGGCAGAATCGAGAGACTACTTCGGAGGAGTTCGTAAACCGCCCGGTGGAGAAAGCTCCATATCCTTGGTT MERTKSSAKPRPSTADLLTWSEVPPPESSPVVSASAARSHQPSDRISKVLQGGQLTDEEAESLLKKKNCSGYKMKEMTGSGIFAANGEGGTSEADNKTGLRMYQQTLNGVSQISFAAEEGVSAKKPSSVPEVAKQRELSGTLQSESDARSKKQISDAKNKELSGHDIFGAPPEITPRSLAAARSLESKESKDMGEPAPRTLRTSVKVSNPAGGQSNILFGEEPVMKTAKKLHNQKFQELTGNDIFKGDAPPGSSEKSLSSAKLREMSGNDIFADGKAESRDYFGGVRKPPGGESSISLV Homology
BLAST of MC01g1048.1 vs. ExPASy Swiss-Prot
Match: Q9SIE0 (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 1.7e-08 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 0
BLAST of MC01g1048.1 vs. NCBI nr
Match: XP_022133190.1 (uncharacterized protein LOC111005849 isoform X2 [Momordica charantia]) HSP 1 Score: 575 bits (1482), Expect = 1.62e-206 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of MC01g1048.1 vs. NCBI nr
Match: XP_022133189.1 (uncharacterized protein LOC111005849 isoform X1 [Momordica charantia]) HSP 1 Score: 568 bits (1464), Expect = 1.17e-203 Identity = 299/306 (97.71%), Postives = 299/306 (97.71%), Query Frame = 0
BLAST of MC01g1048.1 vs. NCBI nr
Match: XP_038882038.1 (uncharacterized protein LOC120073332 [Benincasa hispida]) HSP 1 Score: 541 bits (1395), Expect = 2.95e-193 Identity = 278/299 (92.98%), Postives = 289/299 (96.66%), Query Frame = 0
BLAST of MC01g1048.1 vs. NCBI nr
Match: XP_022978539.1 (uncharacterized protein LOC111478490 [Cucurbita maxima]) HSP 1 Score: 541 bits (1394), Expect = 4.20e-193 Identity = 276/299 (92.31%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of MC01g1048.1 vs. NCBI nr
Match: KAG6604031.1 (DNA oxidative demethylase ALKBH2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034195.1 DNA oxidative demethylase ALKBH2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 539 bits (1389), Expect = 2.43e-192 Identity = 275/299 (91.97%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of MC01g1048.1 vs. ExPASy TrEMBL
Match: A0A6J1BUL4 (uncharacterized protein LOC111005849 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005849 PE=4 SV=1) HSP 1 Score: 575 bits (1482), Expect = 7.86e-207 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of MC01g1048.1 vs. ExPASy TrEMBL
Match: A0A6J1BVA1 (uncharacterized protein LOC111005849 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005849 PE=4 SV=1) HSP 1 Score: 568 bits (1464), Expect = 5.65e-204 Identity = 299/306 (97.71%), Postives = 299/306 (97.71%), Query Frame = 0
BLAST of MC01g1048.1 vs. ExPASy TrEMBL
Match: A0A6J1IUB1 (uncharacterized protein LOC111478490 OS=Cucurbita maxima OX=3661 GN=LOC111478490 PE=4 SV=1) HSP 1 Score: 541 bits (1394), Expect = 2.03e-193 Identity = 276/299 (92.31%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of MC01g1048.1 vs. ExPASy TrEMBL
Match: A0A5A7T420 (DUF4057 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002830 PE=4 SV=1) HSP 1 Score: 536 bits (1382), Expect = 1.37e-191 Identity = 275/299 (91.97%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of MC01g1048.1 vs. ExPASy TrEMBL
Match: A0A1S3B283 (uncharacterized protein LOC103484972 OS=Cucumis melo OX=3656 GN=LOC103484972 PE=4 SV=1) HSP 1 Score: 536 bits (1382), Expect = 1.37e-191 Identity = 275/299 (91.97%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of MC01g1048.1 vs. TAIR 10
Match: AT4G39860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 397.9 bits (1021), Expect = 7.2e-111 Identity = 217/304 (71.38%), Postives = 249/304 (81.91%), Query Frame = 0
BLAST of MC01g1048.1 vs. TAIR 10
Match: AT4G39860.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 148 Blast hits to 144 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 391.0 bits (1003), Expect = 8.8e-109 Identity = 216/304 (71.05%), Postives = 248/304 (81.58%), Query Frame = 0
BLAST of MC01g1048.1 vs. TAIR 10
Match: AT1G78150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 295.4 bits (755), Expect = 5.0e-80 Identity = 168/299 (56.19%), Postives = 212/299 (70.90%), Query Frame = 0
BLAST of MC01g1048.1 vs. TAIR 10
Match: AT1G78150.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 295.4 bits (755), Expect = 5.0e-80 Identity = 168/299 (56.19%), Postives = 212/299 (70.90%), Query Frame = 0
BLAST of MC01g1048.1 vs. TAIR 10
Match: AT1G78150.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1). ) HSP 1 Score: 280.0 bits (715), Expect = 2.2e-75 Identity = 168/328 (51.22%), Postives = 212/328 (64.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following utr5 feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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